Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0652
(647 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_44740| Best HMM Match : GTP_EFTU (HMM E-Value=0) 159 2e-39
SB_40813| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 5e-17
SB_1790| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.050
SB_12004| Best HMM Match : EFG_C (HMM E-Value=1.2e-15) 34 0.087
SB_24031| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_53344| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_33401| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 29 2.5
SB_23706| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 29 2.5
SB_30916| Best HMM Match : C2 (HMM E-Value=1.2e-17) 29 3.3
SB_4542| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_26947| Best HMM Match : LIM (HMM E-Value=6.2e-32) 29 4.3
SB_42203| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_20701| Best HMM Match : DUF1027 (HMM E-Value=2.4) 28 5.7
SB_30332| Best HMM Match : RVT_1 (HMM E-Value=2.7e-34) 28 7.5
SB_26912| Best HMM Match : C2 (HMM E-Value=1.4e-17) 28 7.5
SB_5128| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_19996| Best HMM Match : PKD_channel (HMM E-Value=0) 28 7.5
SB_2761| Best HMM Match : zf-TRAF (HMM E-Value=0.26) 28 7.5
SB_3371| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_44311| Best HMM Match : EGF (HMM E-Value=0.048) 27 9.9
SB_21044| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 27 9.9
SB_9978| Best HMM Match : Pkinase (HMM E-Value=3.4e-17) 27 9.9
>SB_44740| Best HMM Match : GTP_EFTU (HMM E-Value=0)
Length = 833
Score = 159 bits (386), Expect = 2e-39
Identities = 76/89 (85%), Positives = 82/89 (92%)
Frame = +1
Query: 1 VGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDP 180
VGVDQFLVKTGTI+T+++ HNMK+MKFSVSPVVRVAVEPKNPADLPKLVEGL RLAKSDP
Sbjct: 447 VGVDQFLVKTGTISTYEHCHNMKMMKFSVSPVVRVAVEPKNPADLPKLVEGLNRLAKSDP 506
Query: 181 MVQCINEESGEQIVAGAGELHLEICLRIL 267
MVQ EESGE IVAGAGELHLEICL+ L
Sbjct: 507 MVQSFTEESGEHIVAGAGELHLEICLKDL 535
Score = 138 bits (335), Expect = 3e-33
Identities = 62/103 (60%), Positives = 80/103 (77%), Gaps = 1/103 (0%)
Frame = +3
Query: 255 LKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDI 434
LKDLEEDHACIP+KKS+PVVSYRE V+++S+Q+CLSKSPNKHNRLFM A P+ + LPEDI
Sbjct: 532 LKDLEEDHACIPLKKSEPVVSYRECVSDKSNQMCLSKSPNKHNRLFMTAGPLEEKLPEDI 591
Query: 435 DEG-RVNPRDDFKTRARYLTEKYEYELPKPVRFGALAPRVPAP 560
D+G +NPR DFK RARYL + Y +++ + + + P P
Sbjct: 592 DDGCEINPRQDFKIRARYLADTYGWDVNEARKIWSFGPEGTGP 634
Score = 92.7 bits (220), Expect = 2e-19
Identities = 41/46 (89%), Positives = 42/46 (91%)
Frame = +2
Query: 509 VTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAK 646
V EARKIW FGPEGTGPN+LVD SKGVQYLNEIKDSVVAGFQWA K
Sbjct: 618 VNEARKIWSFGPEGTGPNLLVDVSKGVQYLNEIKDSVVAGFQWATK 663
>SB_40813| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 809
Score = 85.0 bits (201), Expect = 5e-17
Identities = 40/93 (43%), Positives = 64/93 (68%), Gaps = 3/93 (3%)
Frame = +1
Query: 4 GVDQFLVKTGTITTFKN---AHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKS 174
GVDQ +VKT TIT + A+ + +KF+ +++AVEP NP++LPK+++GL+++ KS
Sbjct: 422 GVDQPIVKTATITEVQGSEEAYIFRPLKFNTCSTIKIAVEPHNPSELPKMLDGLRKVNKS 481
Query: 175 DPMVQCINEESGEQIVAGAGELHLEICLRILRR 273
P++ EESGE ++ G GEL+L+ + LRR
Sbjct: 482 YPLLTTKVEESGEHVILGTGELYLDCIMHDLRR 514
Score = 66.5 bits (155), Expect = 2e-11
Identities = 34/103 (33%), Positives = 56/103 (54%)
Frame = +3
Query: 252 LLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPED 431
++ DL ++ I IK +DPV+++ ETV E S C +++PNK N++ M A+P+ GL ED
Sbjct: 508 IMHDLRRMYSEIDIKVADPVIAFCETVVETSSLKCFAETPNKKNKVTMIAEPLEKGLAED 567
Query: 432 IDEGRVNPRDDFKTRARYLTEKYEYELPKPVRFGALAPRVPAP 560
I+ +V + K + KY+++L A P P
Sbjct: 568 IENEKVLISWNKKKLGEFFQTKYDWDLLAARSIWAFGPENTGP 610
Score = 57.2 bits (132), Expect = 1e-08
Identities = 26/47 (55%), Positives = 30/47 (63%), Gaps = 4/47 (8%)
Frame = +2
Query: 518 ARKIWCFGPEGTGPNILVD----CSKGVQYLNEIKDSVVAGFQWAAK 646
AR IW FGPE TGPNILVD LN +KDS++ GFQWA +
Sbjct: 597 ARSIWAFGPENTGPNILVDDTLPSEVDKSLLNTVKDSIIQGFQWATR 643
>SB_1790| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 35.1 bits (77), Expect = 0.050
Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +1
Query: 130 DLPKLVEGLKRLAKSDPMVQC-INEESGEQIVAGAGELHLEI 252
DL + + + R + DP + ++ES E I++G GELHL++
Sbjct: 36 DLDQFSKAINRFTREDPTFRVRFDDESKETIISGMGELHLDV 77
>SB_12004| Best HMM Match : EFG_C (HMM E-Value=1.2e-15)
Length = 549
Score = 34.3 bits (75), Expect = 0.087
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +2
Query: 518 ARKIWCFGPEGTGPNILVD 574
A IW FGP GTGPNIL++
Sbjct: 179 ADHIWAFGPRGTGPNILLN 197
Score = 32.3 bits (70), Expect = 0.35
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +3
Query: 261 DLEEDHACIPIKKSDPVVSYRETV 332
DL+ +AC+ + SDP++ +RETV
Sbjct: 19 DLKRRYACVELNVSDPIIPFRETV 42
>SB_24031| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1176
Score = 33.1 bits (72), Expect = 0.20
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +3
Query: 291 IKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLP--EDIDEGRVNPRDD 464
I+K+ Y+E + +E++ L + N+H+ + AQ P GL I+E + N R
Sbjct: 216 IEKAQKAFEYKENIEKEAEALRKQQLENRHSLISSNAQYHPQGLETYPSINEYKKNSRMV 275
Query: 465 FK 470
FK
Sbjct: 276 FK 277
>SB_53344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1554
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/36 (47%), Positives = 18/36 (50%)
Frame = -1
Query: 194 IHCTMGSDLARRLRPSTSLGRSAGFLGSTATRTTGD 87
I C MG D RLR ST L R F+GS T D
Sbjct: 1062 IECNMGFDAVMRLRTSTGL-RPVDFVGSFYMSNTTD 1096
>SB_33401| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 4277
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = -1
Query: 176 SDLARRLRPSTSLGRSAGFLGSTATRTTGDTLNFITFMLWAFLKV 42
S+ RR +P T GR+ FLG+ + R T NF+ F+ F+++
Sbjct: 1690 SNDGRRFKPYTQFGRTKVFLGN-SDRNTVVGHNFLPFIKARFIRI 1733
>SB_23706| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 1021
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/69 (27%), Positives = 28/69 (40%)
Frame = +3
Query: 270 EDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRV 449
+DH C + + + V E D+ CL + P + M P+ D GR
Sbjct: 33 KDHTCAAL-----LYTKMTAVNLEGDEPCLMEKPREPRNNDMNTTHYGGKTPDPRDGGRD 87
Query: 450 NPRDDFKTR 476
PRDD K +
Sbjct: 88 GPRDDEKQK 96
>SB_30916| Best HMM Match : C2 (HMM E-Value=1.2e-17)
Length = 809
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +3
Query: 318 YRETVAEESDQLCLSKSPNKHN--RLFMKAQPMPDGLPEDIDEGRVNPRD 461
Y+ + L K N H+ LF K + +P L ED++EG V D
Sbjct: 230 YKSISTRRELYMLLLKRLNLHHLMSLFCKTKKLPVALSEDLEEGEVTEED 279
>SB_4542| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 987
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = -3
Query: 609 LISLRYWTPLEQSTRMLGPVPSGPKHQILRASVTHIRT 496
L+ ++++ + +ST + P+P P H IL A T +RT
Sbjct: 3 LLRIKHYENVSEST-LPAPLPGSPMHIILTAETTGLRT 39
>SB_26947| Best HMM Match : LIM (HMM E-Value=6.2e-32)
Length = 648
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 369 PNKHNRLFMKAQPMPDGLPEDIDEGRVNPRD 461
PN N F+KA P+ DG D + G + RD
Sbjct: 413 PNTGNTEFVKAIPIEDGESHDSNYGTIESRD 443
>SB_42203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 228
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = -1
Query: 296 LDWNASMVLLKILKQISRWSSPAPATICSP 207
L WN + LL +++Q +RW + PA +C+P
Sbjct: 8 LAWNPA--LLCLMRQYNRWLAWNPALLCNP 35
>SB_20701| Best HMM Match : DUF1027 (HMM E-Value=2.4)
Length = 229
Score = 28.3 bits (60), Expect = 5.7
Identities = 20/113 (17%), Positives = 46/113 (40%), Gaps = 2/113 (1%)
Frame = +3
Query: 216 NCRWCWRTPS*DLLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFM 395
N R +RT D E + + + D V ++R + ++++Q ++ N+ +
Sbjct: 12 NARKHFRTKEADQQSHYESAYCSLRVNYIDEVETHR-MLKQDTNQPSTNRRSNRRGLCYY 70
Query: 396 KAQP--MPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYELPKPVRFGALAPR 548
M G+ ++ + D AR+L ++ KP+++ P+
Sbjct: 71 PKDVLMMTSGMERAVEHKKRKENQDMAAAARFLNPPEFFDFTKPLKWPEWKPK 123
>SB_30332| Best HMM Match : RVT_1 (HMM E-Value=2.7e-34)
Length = 1683
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -3
Query: 639 AHWNPATTESLISLRYWTPLEQSTRMLGPVPSG 541
A+WNP T++L + W P+ T ++ PSG
Sbjct: 696 ANWNPFDTDTLGNFIKWNPVNTDTPLI-RTPSG 727
>SB_26912| Best HMM Match : C2 (HMM E-Value=1.4e-17)
Length = 232
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +3
Query: 312 VSYRETVAEESDQLCLS-KSPNKHN--RLFMKAQPMPDGLPEDIDEGRVNPRD 461
V +R + +D L+ + N H+ LF K + +P L ED++EG V D
Sbjct: 29 VKFRYVILNINDFAFLNNRRLNLHHLMSLFCKTKKLPVALSEDLEEGEVTEED 81
>SB_5128| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2102
Score = 27.9 bits (59), Expect = 7.5
Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 4/81 (4%)
Frame = +1
Query: 91 PVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEQIV----AGAGELHLEICL 258
P + EPK P P +++ L + K DP + S +Q++ A G+L +
Sbjct: 1454 PKAKEEEEPKKPVRDPSIIDKLTLVKKVDPSDATLYVSSDDQVIYALDAKTGDLMWKYGT 1513
Query: 259 RILRRTMLAFQSRSLTLSCRT 321
+M AF L C T
Sbjct: 1514 AEDGGSMCAFSPDETVLYCGT 1534
>SB_19996| Best HMM Match : PKD_channel (HMM E-Value=0)
Length = 746
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/22 (54%), Positives = 17/22 (77%), Gaps = 4/22 (18%)
Frame = +3
Query: 405 PMPDGLPEDIDEGR----VNPR 458
P+PDG+ E+IDEG+ +NPR
Sbjct: 721 PVPDGIYEEIDEGQIYDIINPR 742
>SB_2761| Best HMM Match : zf-TRAF (HMM E-Value=0.26)
Length = 436
Score = 27.9 bits (59), Expect = 7.5
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +1
Query: 538 WPRGYRPQHPGGLLQRSPV 594
+PRG P++PGG++ +PV
Sbjct: 209 YPRGAIPEYPGGVIPENPV 227
>SB_3371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1135
Score = 27.5 bits (58), Expect = 9.9
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +1
Query: 250 ICLRILRRTMLAFQSRSLTLSCRTVRP*LRNRTSSVSQSRPTSTTVCS*RLSPC 411
+C+ +FQ SL L C +R L+N + S S TS +CS +LS C
Sbjct: 406 LCVTTEESWSSSFQLTSLDLLCSVLRLALKNASQETSTSTFTS-QMCS-KLSQC 457
>SB_44311| Best HMM Match : EGF (HMM E-Value=0.048)
Length = 266
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +1
Query: 121 NPADLPKLVEGLKRLAKSDPMVQCINEESGEQIVAGAGELHLEICLRIL 267
NP+ P + L K M +CI +ESG + + ICL+++
Sbjct: 38 NPSPTPPTALLITPLTKQTYMTRCITKESGSSLNTPSCVPFSPICLKLI 86
>SB_21044| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 1507
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +1
Query: 274 TMLAFQSRSLTLSCRTVRP*L--RNRTSSVSQSRPTSTTV 387
T+ SR +TLSC+T R + RN +S V+ +R TS V
Sbjct: 1282 TLSCNTSRDVTLSCKTSRGVILARNTSSGVTLTRNTSRGV 1321
>SB_9978| Best HMM Match : Pkinase (HMM E-Value=3.4e-17)
Length = 348
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +3
Query: 291 IKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNP-RDDF 467
+KK S + + + L K K ++ K + +PDGLPE+ + + D F
Sbjct: 25 VKKRRKPASRNPSSQHKKTEKKLKKVKEKVDQKLTKGKDIPDGLPEETSKKLFSAFADKF 84
Query: 468 KTRAR 482
TR R
Sbjct: 85 CTRIR 89
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,812,915
Number of Sequences: 59808
Number of extensions: 500941
Number of successful extensions: 1361
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1358
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1645141000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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