Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0651
         (741 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC026301-11|AAK68891.2|  273|Caenorhabditis elegans Hypothetical...    30   1.5  
AC006673-6|AAF39926.2|  335|Caenorhabditis elegans Serpentine re...    30   2.0  
Z77131-3|CAB00855.1|  156|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z29117-7|CAA82379.1|  159|Caenorhabditis elegans Hypothetical pr...    29   4.6  
Z70038-4|CAA93881.1|  427|Caenorhabditis elegans Hypothetical pr...    28   6.0  
Z50177-3|CAA90545.2|  765|Caenorhabditis elegans Hypothetical pr...    28   6.0  
AC084197-5|AAO38574.1|  335|Caenorhabditis elegans Serpentine re...    28   6.0  

>AC026301-11|AAK68891.2|  273|Caenorhabditis elegans Hypothetical
           protein Y54F10BM.12 protein.
          Length = 273

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 19/65 (29%), Positives = 29/65 (44%)
 Frame = -1

Query: 285 PKLKSVQCEIRCLYFYNWNSCIRAQTSKETQSIRTKGRGPSSVLDYKNQFHIYEMSKTCV 106
           PK++ +QCE +C  FY WN     +  K+   +R +    S   D K  F  +  S    
Sbjct: 208 PKIQRLQCEHKCKIFY-WN---EREMCKKQCKLRLEFDLVSMTSDLKRNFDFFVQSSAIQ 263

Query: 105 NGVLK 91
           N  +K
Sbjct: 264 NFRMK 268


>AC006673-6|AAF39926.2|  335|Caenorhabditis elegans Serpentine
           receptor, class h protein7 protein.
          Length = 335

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
 Frame = +3

Query: 309 MFTYRLLAFKLYKSQNLLILQ-ESVLKV*HVIFLIKLIIFPTFIFYQLHY-LSYKVR 473
           +F YR+ A  +Y+++  ++ Q   +LK    I LI ++IF   I+  L Y   YK++
Sbjct: 111 LFVYRMKAVTIYEAEKSILKQCTMLLKYAFFISLIVVLIFTFLIYPDLKYQKEYKLK 167


>Z77131-3|CAB00855.1|  156|Caenorhabditis elegans Hypothetical
           protein C54C6.4 protein.
          Length = 156

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 12/39 (30%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
 Frame = -2

Query: 572 HKYCQKSV-ILFYFIFLVYLCFATIEKINTYIILS-YFI 462
           H +C  ++ + F F++  + CF  ++ ++T+++LS YFI
Sbjct: 104 HYFCMSNIRMTFSFVYFCFFCFRLLQ-LSTWLLLSTYFI 141


>Z29117-7|CAA82379.1|  159|Caenorhabditis elegans Hypothetical
           protein C48B4.7 protein.
          Length = 159

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
 Frame = -2

Query: 665 YIVFCIKSVQFSTIFKIKLI--CGIIWYRQYFSHK----YCQKSVILFYFIFLVYLCFAT 504
           Y V CI  +  + +F +KLI  C  ++  +  + +    + + + ILF  IF +++C   
Sbjct: 82  YYVSCILLIWPAVVFIMKLISLCNKLFIEENATSRDAKDFMKITAILFAVIFYIWMCLQL 141

Query: 503 IEKINTYIILSYF 465
           I    + +IL  F
Sbjct: 142 IRVAKSRLILPRF 154


>Z70038-4|CAA93881.1|  427|Caenorhabditis elegans Hypothetical
           protein ZK1067.5 protein.
          Length = 427

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -2

Query: 584 QYFSHKYCQKSVILFYFIFLVYLCF 510
           QY S KYC  S++  YF F +  CF
Sbjct: 101 QYIS-KYCSVSIVSHYFHFFLISCF 124


>Z50177-3|CAA90545.2|  765|Caenorhabditis elegans Hypothetical
           protein F46G10.5 protein.
          Length = 765

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 11/57 (19%), Positives = 31/57 (54%)
 Frame = -2

Query: 635 FSTIFKIKLICGIIWYRQYFSHKYCQKSVILFYFIFLVYLCFATIEKINTYIILSYF 465
           F  +  + ++ G++++   FS  +CQ ++    F+++V +    +  I ++ I ++F
Sbjct: 192 FGVLLSLFVLFGVLFF---FSRLFCQFTIFRIVFLWIVAIIAPILSFITSFAIYNFF 245


>AC084197-5|AAO38574.1|  335|Caenorhabditis elegans Serpentine
           receptor, class v protein26 protein.
          Length = 335

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 16/57 (28%), Positives = 27/57 (47%)
 Frame = -1

Query: 249 LYFYNWNSCIRAQTSKETQSIRTKGRGPSSVLDYKNQFHIYEMSKTCVNGVLKNIRC 79
           +++   N C RAQ + E   +RT     S  L Y N + I  ++      V+K++ C
Sbjct: 238 IFYAILNYCSRAQMTAEMFYLRTIYPMLSGFLSYMNPYCILLLNHDLARQVVKSVSC 294


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,082,602
Number of Sequences: 27780
Number of extensions: 331731
Number of successful extensions: 796
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 796
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)