Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0649
(436 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 124 2e-29
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 121 2e-28
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 121 2e-28
SB_56| Best HMM Match : Actin (HMM E-Value=0) 121 2e-28
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 121 2e-28
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 118 2e-27
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 1e-10
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 55 2e-08
SB_54| Best HMM Match : Actin (HMM E-Value=0) 55 2e-08
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 50 1e-06
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 40 7e-04
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 31 0.41
SB_8501| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.54
SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.72
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 29 1.3
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_24425| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_8961| Best HMM Match : NUDE_C (HMM E-Value=5.6) 29 1.7
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 29 1.7
SB_57662| Best HMM Match : Drf_FH1 (HMM E-Value=5.8) 29 2.2
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_44753| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 27 5.0
SB_37120| Best HMM Match : EB (HMM E-Value=4.2) 27 5.0
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 27 6.7
SB_34833| Best HMM Match : E6 (HMM E-Value=7.2) 27 8.8
SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 27 8.8
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 124 bits (300), Expect = 2e-29
Identities = 56/62 (90%), Positives = 60/62 (96%)
Frame = +1
Query: 79 MCDEEVAALVVDNGSGMCKAGFAGEDAPRAGFPSIVGRPRHQGVMVGMGQKDSYVGDEAT 258
MCD++VAALVVDNGSGMCKAGFAG+DAPRA FPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 259 AK 264
+K
Sbjct: 61 SK 62
Score = 121 bits (292), Expect = 2e-28
Identities = 54/59 (91%), Positives = 55/59 (93%)
Frame = +3
Query: 258 SQRGILTLKYPIEHGIVTNWGDMEKIWHHTFYNELRVAPEEQTVLLTEAPLNPKANRXK 434
S+RGILTLKYPIEHGIVTNW DMEKIWHHTFYNELRVAPEE VLLTEAPLNPKANR K
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 121 bits (292), Expect = 2e-28
Identities = 54/59 (91%), Positives = 55/59 (93%)
Frame = +3
Query: 258 SQRGILTLKYPIEHGIVTNWGDMEKIWHHTFYNELRVAPEEQTVLLTEAPLNPKANRXK 434
S+RGILTLKYPIEHGIVTNW DMEKIWHHTFYNELRVAPEE VLLTEAPLNPKANR K
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
Score = 120 bits (289), Expect = 5e-28
Identities = 55/62 (88%), Positives = 59/62 (95%)
Frame = +1
Query: 79 MCDEEVAALVVDNGSGMCKAGFAGEDAPRAGFPSIVGRPRHQGVMVGMGQKDSYVGDEAT 258
M D+E+AALVVDNGSGMCKAGFAG+DAPRA FPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 259 AK 264
+K
Sbjct: 61 SK 62
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 121 bits (292), Expect = 2e-28
Identities = 54/59 (91%), Positives = 55/59 (93%)
Frame = +3
Query: 258 SQRGILTLKYPIEHGIVTNWGDMEKIWHHTFYNELRVAPEEQTVLLTEAPLNPKANRXK 434
S+RGILTLKYPIEHGIVTNW DMEKIWHHTFYNELRVAPEE VLLTEAPLNPKANR K
Sbjct: 60 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 118
Score = 117 bits (282), Expect = 4e-27
Identities = 53/60 (88%), Positives = 58/60 (96%)
Frame = +1
Query: 85 DEEVAALVVDNGSGMCKAGFAGEDAPRAGFPSIVGRPRHQGVMVGMGQKDSYVGDEATAK 264
+++VAALVVDNGSGMCKAGFAG+DAPRA FPSIVGRPRHQGVMVGMGQKDSYVGDEA +K
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 121 bits (292), Expect = 2e-28
Identities = 54/59 (91%), Positives = 55/59 (93%)
Frame = +3
Query: 258 SQRGILTLKYPIEHGIVTNWGDMEKIWHHTFYNELRVAPEEQTVLLTEAPLNPKANRXK 434
S+RGILTLKYPIEHGIVTNW DMEKIWHHTFYNELRVAPEE VLLTEAPLNPKANR K
Sbjct: 60 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 118
Score = 118 bits (285), Expect = 2e-27
Identities = 54/60 (90%), Positives = 58/60 (96%)
Frame = +1
Query: 85 DEEVAALVVDNGSGMCKAGFAGEDAPRAGFPSIVGRPRHQGVMVGMGQKDSYVGDEATAK 264
++EVAALVVDNGSGMCKAGFAG+DAPRA FPSIVGRPRHQGVMVGMGQKDSYVGDEA +K
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 121 bits (292), Expect = 2e-28
Identities = 54/59 (91%), Positives = 55/59 (93%)
Frame = +3
Query: 258 SQRGILTLKYPIEHGIVTNWGDMEKIWHHTFYNELRVAPEEQTVLLTEAPLNPKANRXK 434
S+RGILTLKYPIEHGIVTNW DMEKIWHHTFYNELRVAPEE VLLTEAPLNPKANR K
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
Score = 120 bits (289), Expect = 5e-28
Identities = 53/62 (85%), Positives = 59/62 (95%)
Frame = +1
Query: 79 MCDEEVAALVVDNGSGMCKAGFAGEDAPRAGFPSIVGRPRHQGVMVGMGQKDSYVGDEAT 258
M D+++AALV+DNGSGMCKAGFAG+DAPRA FPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 259 AK 264
+K
Sbjct: 61 SK 62
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 118 bits (285), Expect = 2e-27
Identities = 53/60 (88%), Positives = 58/60 (96%)
Frame = +1
Query: 85 DEEVAALVVDNGSGMCKAGFAGEDAPRAGFPSIVGRPRHQGVMVGMGQKDSYVGDEATAK 264
D++VAALV+DNGSGMCKAGFAG+DAPRA FPSIVGRPRHQGVMVGMGQKDSYVGDEA +K
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 59.7 bits (138), Expect = 1e-09
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = +3
Query: 258 SQRGILTLKYPIEHGIVTNWGDMEKIWHHTF 350
S+RGILTLKYPIEHGIVTNW DMEKI TF
Sbjct: 60 SKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 62.9 bits (146), Expect = 1e-10
Identities = 27/58 (46%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = +3
Query: 264 RGILTLKYPIEHGIVTNWGDMEKIWHHTF-YNELRVAPEEQTVLLTEAPLNPKANRXK 434
R +L + YP+++GIV NW DM+ +W +TF +++ + P VLLTE PLNP NR K
Sbjct: 65 RYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREK 122
Score = 47.6 bits (108), Expect = 4e-06
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Frame = +1
Query: 97 AALVVDNGSGMCKAGFAGEDAPRAGFPSIVGRP--RHQGVMVGMGQKDSYVGDEAT 258
+ +V DNG+G K G+AG + P FPS+VGRP R + + KD VGDEA+
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEAS 62
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 55.2 bits (127), Expect = 2e-08
Identities = 25/39 (64%), Positives = 28/39 (71%)
Frame = +1
Query: 88 EEVAALVVDNGSGMCKAGFAGEDAPRAGFPSIVGRPRHQ 204
E LV+D GS M K GFAG+DAP+ FP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 55.2 bits (127), Expect = 2e-08
Identities = 21/34 (61%), Positives = 29/34 (85%)
Frame = +1
Query: 103 LVVDNGSGMCKAGFAGEDAPRAGFPSIVGRPRHQ 204
+V+DNGSG CKAG + +++PR FP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
Score = 45.2 bits (102), Expect = 2e-05
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = +3
Query: 330 KIWHHTFYNELRVAPEEQTVLLTEAPLNPKANRXK 434
K+W H F ++LRV E+ VLLTEAPLNPK NR +
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRER 2163
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 49.6 bits (113), Expect = 1e-06
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Frame = +1
Query: 73 FKMCDEEVAALVVDNGSGMCKAGFAGEDAPRAGFPSIVGRPRHQGVMVG--MGQKD-SYV 243
FK+ A+V+DNG G+ K GFAG+ PR P++VG P+ +++G + KD
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752
Query: 244 GDEATAK 264
GD A AK
Sbjct: 753 GDAAVAK 759
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 40.3 bits (90), Expect = 7e-04
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +3
Query: 282 KYPIEHGIVTNWGDMEKIWHHTFYNELRVAPEEQTVLL 395
K+PI H IV +W ME+ W + LR PE+ LL
Sbjct: 299 KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 39.1 bits (87), Expect = 0.002
Identities = 21/39 (53%), Positives = 25/39 (64%)
Frame = -2
Query: 201 MAGPSHDRGEPGARSIFSCETGLAHTGAIVYYQRGNFFV 85
MA + D GE G+ SI S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 31.1 bits (67), Expect = 0.41
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +3
Query: 378 EQTVLLTEAPLNPKANRXK 434
+ VLLTEAPLNP+ NR K
Sbjct: 126 QHPVLLTEAPLNPRRNREK 144
>SB_8501| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 543
Score = 30.7 bits (66), Expect = 0.54
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = -3
Query: 185 TIEGNPARGASSPAKPALHIPEPLSTTNAATSSSHILN 72
++ P+R AS PA PA+ +P +T A +++ + N
Sbjct: 356 SVASPPSRQASQPASPAVELPSTTTTIGLACTAAAVTN 393
>SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 221
Score = 30.3 bits (65), Expect = 0.72
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = -1
Query: 253 PHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEHLLLRNRPCTYRSHCLLPTRQLLRR 83
P L +P + RPS + S + LLL RP TYR+ LP+ LL +
Sbjct: 131 PLYLPSAPLLTERPSTYRAPLYLPSAPSTYRAPLLLTERPSTYRAPLYLPSTPLLTK 187
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 29.5 bits (63), Expect = 1.3
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +3
Query: 288 PIEHGIVTNWGDMEKIWHHTFYNELRVAPEEQTVLLTEAPLNPKANRXK 434
PI+ G++ +W EKI + + ++ +L++EA N + R K
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREK 51
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 29.1 bits (62), Expect = 1.7
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 176 GNPARGASSPAKPALHIPEPLSTT 105
GN R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_24425| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 947
Score = 29.1 bits (62), Expect = 1.7
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 179 EGNPARGASSPAKPALHIPEPLSTTNAATSSSHILN 72
E +PA GASSP + EP T+ +S + +L+
Sbjct: 413 ESDPAPGASSPTTSQSSVSEPTPTSKPKSSGTSLLS 448
>SB_8961| Best HMM Match : NUDE_C (HMM E-Value=5.6)
Length = 298
Score = 29.1 bits (62), Expect = 1.7
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 179 EGNPARGASSPAKPALHIPEPLSTTNAATSSSHILN 72
E +PA GASSP + EP T+ +S + +L+
Sbjct: 77 ESDPAPGASSPTTSQSSVSEPTPTSKPKSSGTSLLS 112
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 29.1 bits (62), Expect = 1.7
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 176 GNPARGASSPAKPALHIPEPLSTT 105
GN R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_57662| Best HMM Match : Drf_FH1 (HMM E-Value=5.8)
Length = 157
Score = 28.7 bits (61), Expect = 2.2
Identities = 25/78 (32%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = -3
Query: 347 GMMPNLL-HVTPVSDDSVFDGVFEGQDTSLAVASSPT*ESFCPIPTITP*WRGLPTIEGN 171
G + NL TP S GV ++++ V S SF PI L I
Sbjct: 85 GQVANLPGKATPFSQQVAPAGVLHTRNSTRVVPGSTP--SFAPIGK-----EPLSRISNG 137
Query: 170 PARGASSPAKPALHIPEP 117
P + A+S A PAL +P P
Sbjct: 138 PPKQAASDAAPALKVPSP 155
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 27.9 bits (59), Expect = 3.8
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 176 GNPARGASSPAKPALHIPEPLSTT 105
GN R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_44753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1379
Score = 27.9 bits (59), Expect = 3.8
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -3
Query: 233 SFCPIPTITP*WRGLPTIEGNPARGASSPAKPAL 132
SF P TP RG PT P+RG +P K A+
Sbjct: 1310 SFGPNRVSTP-KRGSPTSRNTPSRGLRTPVKTAM 1342
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 27.5 bits (58), Expect = 5.0
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 97 AALVVDNGSGMCKAGFAGEDAPRAGFPSIVGRPRH 201
+ +++D GS KAGFA E+A + + S++G H
Sbjct: 483 SVIIIDLGSSSVKAGFAQEEA-QVFYISLIGILEH 516
>SB_37120| Best HMM Match : EB (HMM E-Value=4.2)
Length = 376
Score = 27.5 bits (58), Expect = 5.0
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = -3
Query: 197 RGLPTIEGNPARGASSPAKPALHIPEPLSTTNAATSSSHI-LN*FLIK 57
+ PT + PA+ +P KPA P A +S+S + N F++K
Sbjct: 295 KATPTKKPTPAKKKPAPKKPAAKKPAKAKKPGAVSSASKLRCNAFVVK 342
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 27.1 bits (57), Expect = 6.7
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +3
Query: 288 PIEHGIVTNWGDMEKIWHHTFYNE 359
P + G + NW ++IW +TF E
Sbjct: 292 PFQKGFLVNWDVEKQIWDYTFGKE 315
>SB_34833| Best HMM Match : E6 (HMM E-Value=7.2)
Length = 135
Score = 26.6 bits (56), Expect = 8.8
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -1
Query: 154 LLLRNRPCTYRSHCLLP 104
+L R R C YRSH LLP
Sbjct: 51 VLFRGRYCQYRSHNLLP 67
>SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 26.6 bits (56), Expect = 8.8
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -3
Query: 191 LPTIEGNPARGASSPAKPALHIPEPLSTTNAATSSSH 81
L IE + A++P P + +P+ + +AAT +SH
Sbjct: 222 LRRIERSNIPQATAPGTPGVPVPQAVHGVSAATQASH 258
>SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 617
Score = 26.6 bits (56), Expect = 8.8
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -1
Query: 247 LLHKSPSVPYRPS--RPDGGAFPRSRGTRREEHLLLRNRPCTYRSHCLLPT 101
LL +S P +P+ RP GGA P++ ++ + N+ T+ PT
Sbjct: 92 LLDESTEAPPQPATIRPQGGALPQTPVKGKQNKRVSDNKEFTHAMQARRPT 142
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 26.6 bits (56), Expect = 8.8
Identities = 21/70 (30%), Positives = 28/70 (40%), Gaps = 3/70 (4%)
Frame = -3
Query: 299 VFDGVFEGQDTSLAVASSPT*ESFCPIPTITP*WRGLPTIEGNPAR---GASSPAKPALH 129
+FD + E T V +P S P +TP +G T G+P + S P P
Sbjct: 550 IFDRIGEEVPT---VRPTPPLTSTAAEPVVTPTTKGKTTTTGHPTKTPTTTSGPTHPPTT 606
Query: 128 IPEPLSTTNA 99
P ST A
Sbjct: 607 TARPTSTAPA 616
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,497,381
Number of Sequences: 59808
Number of extensions: 336088
Number of successful extensions: 1011
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1007
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 834771332
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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