Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0649
(436 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 126 9e-30
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 126 9e-30
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 126 9e-30
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 126 9e-30
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 126 9e-30
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 126 9e-30
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 126 9e-30
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 126 9e-30
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 124 2e-29
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 124 2e-29
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 124 2e-29
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 123 6e-29
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 121 2e-28
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 121 2e-28
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 120 6e-28
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 82 2e-16
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 67 6e-12
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 60 5e-10
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 38 0.004
Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical pr... 33 0.068
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 32 0.16
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 32 0.16
U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical p... 31 0.48
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 29 1.5
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 29 1.5
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 29 1.5
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 29 1.5
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 29 1.9
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 28 3.4
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 28 3.4
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 28 3.4
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 28 3.4
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 27 4.4
Z49132-8|CAA88987.1| 366|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z49127-3|CAA88946.1| 523|Caenorhabditis elegans Hypothetical pr... 27 7.8
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 126 bits (303), Expect = 9e-30
Identities = 57/62 (91%), Positives = 60/62 (96%)
Frame = +1
Query: 79 MCDEEVAALVVDNGSGMCKAGFAGEDAPRAGFPSIVGRPRHQGVMVGMGQKDSYVGDEAT 258
MCD+EVAALVVDNGSGMCKAGFAG+DAPRA FPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 259 AK 264
+K
Sbjct: 61 SK 62
Score = 121 bits (292), Expect = 2e-28
Identities = 54/59 (91%), Positives = 55/59 (93%)
Frame = +3
Query: 258 SQRGILTLKYPIEHGIVTNWGDMEKIWHHTFYNELRVAPEEQTVLLTEAPLNPKANRXK 434
S+RGILTLKYPIEHGIVTNW DMEKIWHHTFYNELRVAPEE VLLTEAPLNPKANR K
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 126 bits (303), Expect = 9e-30
Identities = 57/62 (91%), Positives = 60/62 (96%)
Frame = +1
Query: 79 MCDEEVAALVVDNGSGMCKAGFAGEDAPRAGFPSIVGRPRHQGVMVGMGQKDSYVGDEAT 258
MCD+EVAALVVDNGSGMCKAGFAG+DAPRA FPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 259 AK 264
+K
Sbjct: 61 SK 62
Score = 121 bits (292), Expect = 2e-28
Identities = 54/59 (91%), Positives = 55/59 (93%)
Frame = +3
Query: 258 SQRGILTLKYPIEHGIVTNWGDMEKIWHHTFYNELRVAPEEQTVLLTEAPLNPKANRXK 434
S+RGILTLKYPIEHGIVTNW DMEKIWHHTFYNELRVAPEE VLLTEAPLNPKANR K
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 126 bits (303), Expect = 9e-30
Identities = 57/62 (91%), Positives = 60/62 (96%)
Frame = +1
Query: 79 MCDEEVAALVVDNGSGMCKAGFAGEDAPRAGFPSIVGRPRHQGVMVGMGQKDSYVGDEAT 258
MCD+EVAALVVDNGSGMCKAGFAG+DAPRA FPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 259 AK 264
+K
Sbjct: 61 SK 62
Score = 121 bits (292), Expect = 2e-28
Identities = 54/59 (91%), Positives = 55/59 (93%)
Frame = +3
Query: 258 SQRGILTLKYPIEHGIVTNWGDMEKIWHHTFYNELRVAPEEQTVLLTEAPLNPKANRXK 434
S+RGILTLKYPIEHGIVTNW DMEKIWHHTFYNELRVAPEE VLLTEAPLNPKANR K
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 126 bits (303), Expect = 9e-30
Identities = 57/62 (91%), Positives = 60/62 (96%)
Frame = +1
Query: 79 MCDEEVAALVVDNGSGMCKAGFAGEDAPRAGFPSIVGRPRHQGVMVGMGQKDSYVGDEAT 258
MCD+EVAALVVDNGSGMCKAGFAG+DAPRA FPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 259 AK 264
+K
Sbjct: 61 SK 62
Score = 121 bits (292), Expect = 2e-28
Identities = 54/59 (91%), Positives = 55/59 (93%)
Frame = +3
Query: 258 SQRGILTLKYPIEHGIVTNWGDMEKIWHHTFYNELRVAPEEQTVLLTEAPLNPKANRXK 434
S+RGILTLKYPIEHGIVTNW DMEKIWHHTFYNELRVAPEE VLLTEAPLNPKANR K
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 126 bits (303), Expect = 9e-30
Identities = 57/62 (91%), Positives = 60/62 (96%)
Frame = +1
Query: 79 MCDEEVAALVVDNGSGMCKAGFAGEDAPRAGFPSIVGRPRHQGVMVGMGQKDSYVGDEAT 258
MCD+EVAALVVDNGSGMCKAGFAG+DAPRA FPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 259 AK 264
+K
Sbjct: 61 SK 62
Score = 121 bits (292), Expect = 2e-28
Identities = 54/59 (91%), Positives = 55/59 (93%)
Frame = +3
Query: 258 SQRGILTLKYPIEHGIVTNWGDMEKIWHHTFYNELRVAPEEQTVLLTEAPLNPKANRXK 434
S+RGILTLKYPIEHGIVTNW DMEKIWHHTFYNELRVAPEE VLLTEAPLNPKANR K
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 126 bits (303), Expect = 9e-30
Identities = 57/62 (91%), Positives = 60/62 (96%)
Frame = +1
Query: 79 MCDEEVAALVVDNGSGMCKAGFAGEDAPRAGFPSIVGRPRHQGVMVGMGQKDSYVGDEAT 258
MCD+EVAALVVDNGSGMCKAGFAG+DAPRA FPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 259 AK 264
+K
Sbjct: 61 SK 62
Score = 121 bits (292), Expect = 2e-28
Identities = 54/59 (91%), Positives = 55/59 (93%)
Frame = +3
Query: 258 SQRGILTLKYPIEHGIVTNWGDMEKIWHHTFYNELRVAPEEQTVLLTEAPLNPKANRXK 434
S+RGILTLKYPIEHGIVTNW DMEKIWHHTFYNELRVAPEE VLLTEAPLNPKANR K
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 126 bits (303), Expect = 9e-30
Identities = 57/62 (91%), Positives = 60/62 (96%)
Frame = +1
Query: 79 MCDEEVAALVVDNGSGMCKAGFAGEDAPRAGFPSIVGRPRHQGVMVGMGQKDSYVGDEAT 258
MCD+EVAALVVDNGSGMCKAGFAG+DAPRA FPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 259 AK 264
+K
Sbjct: 61 SK 62
Score = 56.0 bits (129), Expect = 1e-08
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +3
Query: 258 SQRGILTLKYPIEHGIVTNWGDMEKI 335
S+RGILTLKYPIEHGIVTNW DMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 126 bits (303), Expect = 9e-30
Identities = 57/62 (91%), Positives = 60/62 (96%)
Frame = +1
Query: 79 MCDEEVAALVVDNGSGMCKAGFAGEDAPRAGFPSIVGRPRHQGVMVGMGQKDSYVGDEAT 258
MCD+EVAALVVDNGSGMCKAGFAG+DAPRA FPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 259 AK 264
+K
Sbjct: 61 SK 62
Score = 56.0 bits (129), Expect = 1e-08
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +3
Query: 258 SQRGILTLKYPIEHGIVTNWGDMEKI 335
S+RGILTLKYPIEHGIVTNW DMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 124 bits (300), Expect = 2e-29
Identities = 56/62 (90%), Positives = 60/62 (96%)
Frame = +1
Query: 79 MCDEEVAALVVDNGSGMCKAGFAGEDAPRAGFPSIVGRPRHQGVMVGMGQKDSYVGDEAT 258
MCD++VAALVVDNGSGMCKAGFAG+DAPRA FPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 259 AK 264
+K
Sbjct: 61 SK 62
Score = 121 bits (292), Expect = 2e-28
Identities = 54/59 (91%), Positives = 55/59 (93%)
Frame = +3
Query: 258 SQRGILTLKYPIEHGIVTNWGDMEKIWHHTFYNELRVAPEEQTVLLTEAPLNPKANRXK 434
S+RGILTLKYPIEHGIVTNW DMEKIWHHTFYNELRVAPEE VLLTEAPLNPKANR K
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 124 bits (300), Expect = 2e-29
Identities = 56/62 (90%), Positives = 60/62 (96%)
Frame = +1
Query: 79 MCDEEVAALVVDNGSGMCKAGFAGEDAPRAGFPSIVGRPRHQGVMVGMGQKDSYVGDEAT 258
MCD++VAALVVDNGSGMCKAGFAG+DAPRA FPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 259 AK 264
+K
Sbjct: 61 SK 62
Score = 56.0 bits (129), Expect = 1e-08
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +3
Query: 258 SQRGILTLKYPIEHGIVTNWGDMEKI 335
S+RGILTLKYPIEHGIVTNW DMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 124 bits (300), Expect = 2e-29
Identities = 56/62 (90%), Positives = 60/62 (96%)
Frame = +1
Query: 79 MCDEEVAALVVDNGSGMCKAGFAGEDAPRAGFPSIVGRPRHQGVMVGMGQKDSYVGDEAT 258
MCD++VAALVVDNGSGMCKAGFAG+DAPRA FPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 259 AK 264
+K
Sbjct: 61 SK 62
Score = 50.4 bits (115), Expect = 6e-07
Identities = 21/23 (91%), Positives = 22/23 (95%)
Frame = +3
Query: 258 SQRGILTLKYPIEHGIVTNWGDM 326
S+RGILTLKYPIEHGIVTNW DM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDM 83
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 123 bits (296), Expect = 6e-29
Identities = 54/62 (87%), Positives = 60/62 (96%)
Frame = +1
Query: 79 MCDEEVAALVVDNGSGMCKAGFAGEDAPRAGFPSIVGRPRHQGVMVGMGQKDSYVGDEAT 258
MCD++VAAL++DNGSGMCKAGFAG+DAPRA FPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 259 AK 264
+K
Sbjct: 61 SK 62
Score = 121 bits (292), Expect = 2e-28
Identities = 54/59 (91%), Positives = 55/59 (93%)
Frame = +3
Query: 258 SQRGILTLKYPIEHGIVTNWGDMEKIWHHTFYNELRVAPEEQTVLLTEAPLNPKANRXK 434
S+RGILTLKYPIEHGIVTNW DMEKIWHHTFYNELRVAPEE VLLTEAPLNPKANR K
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 121 bits (292), Expect = 2e-28
Identities = 54/59 (91%), Positives = 55/59 (93%)
Frame = +3
Query: 258 SQRGILTLKYPIEHGIVTNWGDMEKIWHHTFYNELRVAPEEQTVLLTEAPLNPKANRXK 434
S+RGILTLKYPIEHGIVTNW DMEKIWHHTFYNELRVAPEE VLLTEAPLNPKANR K
Sbjct: 17 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 75
Score = 37.5 bits (83), Expect = 0.004
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +1
Query: 211 MVGMGQKDSYVGDEATAK 264
MVGMGQKDSYVGDEA +K
Sbjct: 1 MVGMGQKDSYVGDEAQSK 18
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 121 bits (292), Expect = 2e-28
Identities = 54/59 (91%), Positives = 55/59 (93%)
Frame = +3
Query: 258 SQRGILTLKYPIEHGIVTNWGDMEKIWHHTFYNELRVAPEEQTVLLTEAPLNPKANRXK 434
S+RGILTLKYPIEHGIVTNW DMEKIWHHTFYNELRVAPEE VLLTEAPLNPKANR K
Sbjct: 47 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 105
Score = 87.4 bits (207), Expect = 4e-18
Identities = 39/44 (88%), Positives = 42/44 (95%)
Frame = +1
Query: 133 KAGFAGEDAPRAGFPSIVGRPRHQGVMVGMGQKDSYVGDEATAK 264
+AGFAG+DAPRA FPSIVGRPRHQGVMVGMGQKDSYVGDEA +K
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 48
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 120 bits (288), Expect = 6e-28
Identities = 52/59 (88%), Positives = 55/59 (93%)
Frame = +3
Query: 258 SQRGILTLKYPIEHGIVTNWGDMEKIWHHTFYNELRVAPEEQTVLLTEAPLNPKANRXK 434
S+RGILTLKYPIEHGIVTNW DMEKIWHHTFYNELR+APEE VLLTEAPLNPK+NR K
Sbjct: 60 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREK 118
Score = 119 bits (287), Expect = 8e-28
Identities = 54/60 (90%), Positives = 58/60 (96%)
Frame = +1
Query: 85 DEEVAALVVDNGSGMCKAGFAGEDAPRAGFPSIVGRPRHQGVMVGMGQKDSYVGDEATAK 264
+EE+AALVVDNGSGMCKAGFAG+DAPRA FPSIVGRPRHQGVMVGMGQKDSYVGDEA +K
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 81.8 bits (193), Expect = 2e-16
Identities = 34/60 (56%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
Frame = +3
Query: 258 SQRGILTLKYPIEHGIVTNWGDMEKIWHHTF-YNELRVAPEEQTVLLTEAPLNPKANRXK 434
S RG+ +++YP+EHGIV NW DMEKIW + F ++L++ PEE VLLT+APLNP NR +
Sbjct: 63 SNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRER 122
Score = 58.0 bits (134), Expect = 3e-09
Identities = 25/51 (49%), Positives = 35/51 (68%)
Frame = +1
Query: 103 LVVDNGSGMCKAGFAGEDAPRAGFPSIVGRPRHQGVMVGMGQKDSYVGDEA 255
+V+DNGSG+ KAGFAGE P+ F + VGRP++ VM G D ++G +A
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKA 61
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 66.9 bits (156), Expect = 6e-12
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = +3
Query: 264 RGILTLKYPIEHGIVTNWGDMEKIWHHTFYNE-LRVAPEEQTVLLTEAPLNPKANRXK 434
R +L + YP+++GIV NW DM +W HTF E L + P+E +LLTE PLNP +NR K
Sbjct: 65 RQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREK 122
Score = 44.8 bits (101), Expect = 3e-05
Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +1
Query: 103 LVVDNGSGMCKAGFAGEDAPRAGFPSIVGRP--RHQGVMVGMGQKDSYVGDEAT 258
+VVDNG+G K G+AG + P FPS+VGRP R + + KD VG+E +
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECS 62
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 60.5 bits (140), Expect = 5e-10
Identities = 26/51 (50%), Positives = 31/51 (60%)
Frame = +3
Query: 276 TLKYPIEHGIVTNWGDMEKIWHHTFYNELRVAPEEQTVLLTEAPLNPKANR 428
T+KYPI HGIV +W ME+ W + LR PE+ LLTE PLN NR
Sbjct: 80 TVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPENR 130
Score = 33.5 bits (73), Expect = 0.068
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 79 MCDEEVAALVVDNGSGMCKAGFAGEDAPRAGFPSIV 186
M ++ A V+DNG+G K G+AG P+ PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 37.5 bits (83), Expect = 0.004
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +3
Query: 291 IEHGIVTNWGDMEKIWHHTFYNELRVAPEEQTVLLTEAPLNPKANRXK 434
++ G++ +W EKI H++ N L P E VL +E+ N +A R K
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREK 141
Score = 35.5 bits (78), Expect = 0.017
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +1
Query: 88 EEVAALVVDNGSGMCKAGFAGEDAPRAGFPSIV 186
+EV+ LV D GS + GFAGE+ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical
protein C27H2.2a protein.
Length = 906
Score = 33.5 bits (73), Expect = 0.068
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = -1
Query: 340 CQIFSMSPQLVTIPC-SMGYLRVRIPLWLWPHLLHKSPSVP-YRPSRPD 200
CQ+FS PQLVT+ SMG +++++ + P L KS + P P+ P+
Sbjct: 251 CQLFSSQPQLVTMNLNSMGTIKLQLVVTWLPLLASKSSTKPTIAPNPPE 299
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 32.3 bits (70), Expect = 0.16
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +3
Query: 288 PIEHGIVTNWGDMEKIWHHTFYNELRVAPEEQTVLLTE 401
PIE G V NW ++IW TF + V + LT+
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTD 98
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 32.3 bits (70), Expect = 0.16
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +3
Query: 288 PIEHGIVTNWGDMEKIWHHTFYNELRVAPEEQTVLLTE 401
PIE G V NW ++IW TF + V + LT+
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTD 98
>U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical
protein C37C3.1 protein.
Length = 470
Score = 30.7 bits (66), Expect = 0.48
Identities = 23/64 (35%), Positives = 29/64 (45%)
Frame = -1
Query: 271 IPLWLWPHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEHLLLRNRPCTYRSHCLLPTRQL 92
+P W WP +L K+ P +PS P FPRS R E + R T S L R L
Sbjct: 246 LPDWAWPPILVKNE--PIQPSLPVIIDFPRSSPLRAAE---ISRRKSTSHSTSLSKRRYL 300
Query: 91 LRRT 80
R+
Sbjct: 301 RSRS 304
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 29.1 bits (62), Expect = 1.5
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -3
Query: 194 GLPTIEGNPARGASSPAKPALHIP 123
G P GNP +GAS+P +P P
Sbjct: 123 GAPGAPGNPGKGASAPCEPVTQPP 146
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 29.1 bits (62), Expect = 1.5
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -3
Query: 194 GLPTIEGNPARGASSPAKPALHIP 123
G P GNP +GAS+P +P P
Sbjct: 123 GAPGAPGNPGKGASAPCEPVTQPP 146
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 29.1 bits (62), Expect = 1.5
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -3
Query: 194 GLPTIEGNPARGASSPAKPALHIP 123
G P GNP +GAS+P +P P
Sbjct: 123 GAPGAPGNPGKGASAPCEPVTQPP 146
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 29.1 bits (62), Expect = 1.5
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -3
Query: 194 GLPTIEGNPARGASSPAKPALHIP 123
G P GNP +GAS+P +P P
Sbjct: 123 GAPGAPGNPGKGASAPCEPVTQPP 146
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 28.7 bits (61), Expect = 1.9
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +3
Query: 183 RGKAPPSGRDGRYGTEGLLCRR*GHSQRG 269
RGKA +GRDGR G EG R +RG
Sbjct: 216 RGKAGHTGRDGRPGLEGTPGTRGVQGERG 244
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.9 bits (59), Expect = 3.4
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = -3
Query: 197 RGLPTIEGNPARGASSPAKPALHIPEPLSTTNAATSS 87
R P +E P +SSPA P++ P P +T++ +TSS
Sbjct: 641 RAHPEVE-QPV-SSSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.9 bits (59), Expect = 3.4
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = -3
Query: 197 RGLPTIEGNPARGASSPAKPALHIPEPLSTTNAATSS 87
R P +E P +SSPA P++ P P +T++ +TSS
Sbjct: 642 RAHPEVE-QPV-SSSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.9 bits (59), Expect = 3.4
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = -3
Query: 197 RGLPTIEGNPARGASSPAKPALHIPEPLSTTNAATSS 87
R P +E P +SSPA P++ P P +T++ +TSS
Sbjct: 642 RAHPEVE-QPV-SSSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.9 bits (59), Expect = 3.4
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = -3
Query: 197 RGLPTIEGNPARGASSPAKPALHIPEPLSTTNAATSS 87
R P +E P +SSPA P++ P P +T++ +TSS
Sbjct: 642 RAHPEVE-QPV-SSSSPATPSISGPPPCATSSGSTSS 676
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.5 bits (58), Expect = 4.4
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 133 KAGFAGEDAPRAGFPSIVGRPRHQG 207
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>Z49132-8|CAA88987.1| 366|Caenorhabditis elegans Hypothetical
protein ZK666.8 protein.
Length = 366
Score = 26.6 bits (56), Expect = 7.8
Identities = 21/66 (31%), Positives = 31/66 (46%)
Frame = -2
Query: 351 RRYDAKSSPCHPS**RFRVRWGI*GSGYLFGCGLISYIRVLLSHTDHHALMAGPSHDRGE 172
+R D S+P P +FR RW I G G G I Y+ + + + A+ A P +G+
Sbjct: 48 KRPDPTSTPLMPIDEKFRKRWHIEGIIGKGGYGEI-YLAIDMKLAEEVAIKAEPLVRKGK 106
Query: 171 PGARSI 154
R I
Sbjct: 107 IARRMI 112
>Z49127-3|CAA88946.1| 523|Caenorhabditis elegans Hypothetical
protein F13D12.4a protein.
Length = 523
Score = 26.6 bits (56), Expect = 7.8
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -1
Query: 271 IPLWLWPHLLHKSPSVPYRPSRPDGGA 191
IPLW++P L ++ +PS D GA
Sbjct: 181 IPLWMFPVALATGNTMVIKPSEQDPGA 207
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,387,799
Number of Sequences: 27780
Number of extensions: 236824
Number of successful extensions: 910
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 908
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 735312162
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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