Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0649
(436 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 120 6e-28
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 120 6e-28
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 119 7e-28
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 119 7e-28
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 119 1e-27
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 119 1e-27
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 119 1e-27
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 119 1e-27
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 119 1e-27
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 111 2e-25
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 109 8e-25
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 105 1e-23
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 76 9e-15
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 58 2e-09
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 56 1e-08
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 55 2e-08
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 43 1e-04
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 42 1e-04
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 33 0.063
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 29 1.8
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 29 1.8
At1g16690.2 68414.m01999 transcription factor-related similar to... 27 4.1
At1g16690.1 68414.m01998 transcription factor-related similar to... 27 4.1
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 5.5
At5g59310.1 68418.m07432 lipid transfer protein 4 (LTP4) identic... 27 7.2
At1g60060.1 68414.m06766 expressed protein 27 7.2
At3g62850.1 68416.m07061 zinc finger protein-related contains Pf... 26 9.5
At2g22450.1 68415.m02662 riboflavin biosynthesis protein, putati... 26 9.5
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 120 bits (288), Expect = 6e-28
Identities = 53/59 (89%), Positives = 55/59 (93%)
Frame = +3
Query: 258 SQRGILTLKYPIEHGIVTNWGDMEKIWHHTFYNELRVAPEEQTVLLTEAPLNPKANRXK 434
S+RGILTLKYPIEHGIV+NW DMEKIWHHTFYNELRVAPEE VLLTEAPLNPKANR K
Sbjct: 62 SKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Score = 102 bits (245), Expect = 9e-23
Identities = 46/59 (77%), Positives = 52/59 (88%)
Frame = +1
Query: 88 EEVAALVVDNGSGMCKAGFAGEDAPRAGFPSIVGRPRHQGVMVGMGQKDSYVGDEATAK 264
E++ LV DNG+GM KAGFAG+DAPRA FPSIVGRPRH GVMVGMGQKD+YVGDEA +K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 120 bits (288), Expect = 6e-28
Identities = 53/59 (89%), Positives = 55/59 (93%)
Frame = +3
Query: 258 SQRGILTLKYPIEHGIVTNWGDMEKIWHHTFYNELRVAPEEQTVLLTEAPLNPKANRXK 434
S+RGILTLKYPIEHGIV+NW DMEKIWHHTFYNELRVAPEE VLLTEAPLNPKANR K
Sbjct: 62 SKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Score = 102 bits (245), Expect = 9e-23
Identities = 46/59 (77%), Positives = 52/59 (88%)
Frame = +1
Query: 88 EEVAALVVDNGSGMCKAGFAGEDAPRAGFPSIVGRPRHQGVMVGMGQKDSYVGDEATAK 264
E++ LV DNG+GM KAGFAG+DAPRA FPSIVGRPRH GVMVGMGQKD+YVGDEA +K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 119 bits (287), Expect = 7e-28
Identities = 53/59 (89%), Positives = 54/59 (91%)
Frame = +3
Query: 258 SQRGILTLKYPIEHGIVTNWGDMEKIWHHTFYNELRVAPEEQTVLLTEAPLNPKANRXK 434
S+RGILTLKYPIEHGIV NW DMEKIWHHTFYNELRVAPEE VLLTEAPLNPKANR K
Sbjct: 62 SKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Score = 102 bits (245), Expect = 9e-23
Identities = 46/59 (77%), Positives = 52/59 (88%)
Frame = +1
Query: 88 EEVAALVVDNGSGMCKAGFAGEDAPRAGFPSIVGRPRHQGVMVGMGQKDSYVGDEATAK 264
E++ LV DNG+GM KAGFAG+DAPRA FPSIVGRPRH GVMVGMGQKD+YVGDEA +K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 119 bits (287), Expect = 7e-28
Identities = 53/59 (89%), Positives = 54/59 (91%)
Frame = +3
Query: 258 SQRGILTLKYPIEHGIVTNWGDMEKIWHHTFYNELRVAPEEQTVLLTEAPLNPKANRXK 434
S+RGILTLKYPIEHGIV NW DMEKIWHHTFYNELRVAPEE VLLTEAPLNPKANR K
Sbjct: 62 SKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Score = 102 bits (245), Expect = 9e-23
Identities = 46/59 (77%), Positives = 52/59 (88%)
Frame = +1
Query: 88 EEVAALVVDNGSGMCKAGFAGEDAPRAGFPSIVGRPRHQGVMVGMGQKDSYVGDEATAK 264
E++ LV DNG+GM KAGFAG+DAPRA FPSIVGRPRH GVMVGMGQKD+YVGDEA +K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 119 bits (286), Expect = 1e-27
Identities = 52/59 (88%), Positives = 54/59 (91%)
Frame = +3
Query: 258 SQRGILTLKYPIEHGIVTNWGDMEKIWHHTFYNELRVAPEEQTVLLTEAPLNPKANRXK 434
S+RGILTLKYPIEHGIV NW DMEKIWHHTFYNELRVAPEE +LLTEAPLNPKANR K
Sbjct: 62 SKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
Score = 102 bits (245), Expect = 9e-23
Identities = 46/59 (77%), Positives = 52/59 (88%)
Frame = +1
Query: 88 EEVAALVVDNGSGMCKAGFAGEDAPRAGFPSIVGRPRHQGVMVGMGQKDSYVGDEATAK 264
E++ LV DNG+GM KAGFAG+DAPRA FPSIVGRPRH GVMVGMGQKD+YVGDEA +K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 119 bits (286), Expect = 1e-27
Identities = 51/59 (86%), Positives = 55/59 (93%)
Frame = +3
Query: 258 SQRGILTLKYPIEHGIVTNWGDMEKIWHHTFYNELRVAPEEQTVLLTEAPLNPKANRXK 434
S+RGILTLKYPIEHG+V+NW DMEKIWHHTFYNELR+APEE VLLTEAPLNPKANR K
Sbjct: 62 SKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREK 120
Score = 98.3 bits (234), Expect = 2e-21
Identities = 42/59 (71%), Positives = 51/59 (86%)
Frame = +1
Query: 88 EEVAALVVDNGSGMCKAGFAGEDAPRAGFPSIVGRPRHQGVMVGMGQKDSYVGDEATAK 264
+++ +V DNG+GM KAGFAG+DAPRA FPS+VGRPRH GVMVGM QKD+YVGDEA +K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 119 bits (286), Expect = 1e-27
Identities = 51/59 (86%), Positives = 55/59 (93%)
Frame = +3
Query: 258 SQRGILTLKYPIEHGIVTNWGDMEKIWHHTFYNELRVAPEEQTVLLTEAPLNPKANRXK 434
S+RGILTLKYPIEHG+V+NW DMEKIWHHTFYNELR+APEE VLLTEAPLNPKANR K
Sbjct: 62 SKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREK 120
Score = 98.3 bits (234), Expect = 2e-21
Identities = 42/59 (71%), Positives = 51/59 (86%)
Frame = +1
Query: 88 EEVAALVVDNGSGMCKAGFAGEDAPRAGFPSIVGRPRHQGVMVGMGQKDSYVGDEATAK 264
+++ +V DNG+GM KAGFAG+DAPRA FPS+VGRPRH GVMVGM QKD+YVGDEA +K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 119 bits (286), Expect = 1e-27
Identities = 52/59 (88%), Positives = 54/59 (91%)
Frame = +3
Query: 258 SQRGILTLKYPIEHGIVTNWGDMEKIWHHTFYNELRVAPEEQTVLLTEAPLNPKANRXK 434
S+RGILTLKYPIEHGIV NW DMEKIWHHTFYNELRVAPEE +LLTEAPLNPKANR K
Sbjct: 62 SKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
Score = 102 bits (245), Expect = 9e-23
Identities = 46/59 (77%), Positives = 52/59 (88%)
Frame = +1
Query: 88 EEVAALVVDNGSGMCKAGFAGEDAPRAGFPSIVGRPRHQGVMVGMGQKDSYVGDEATAK 264
E++ LV DNG+GM KAGFAG+DAPRA FPSIVGRPRH GVMVGMGQKD+YVGDEA +K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 119 bits (286), Expect = 1e-27
Identities = 51/59 (86%), Positives = 55/59 (93%)
Frame = +3
Query: 258 SQRGILTLKYPIEHGIVTNWGDMEKIWHHTFYNELRVAPEEQTVLLTEAPLNPKANRXK 434
S+RGILTLKYPIEHG+V+NW DMEKIWHHTFYNELR+APEE VLLTEAPLNPKANR K
Sbjct: 62 SKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREK 120
Score = 98.3 bits (234), Expect = 2e-21
Identities = 42/59 (71%), Positives = 51/59 (86%)
Frame = +1
Query: 88 EEVAALVVDNGSGMCKAGFAGEDAPRAGFPSIVGRPRHQGVMVGMGQKDSYVGDEATAK 264
+++ +V DNG+GM KAGFAG+DAPRA FPS+VGRPRH GVMVGM QKD+YVGDEA +K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 111 bits (267), Expect = 2e-25
Identities = 46/59 (77%), Positives = 53/59 (89%)
Frame = +3
Query: 258 SQRGILTLKYPIEHGIVTNWGDMEKIWHHTFYNELRVAPEEQTVLLTEAPLNPKANRXK 434
++RGIL+LKYPIEHG+V+NW DMEKIWHHTFYNELR+ PEE +LLTEAPLNPK NR K
Sbjct: 63 ARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREK 121
Score = 97.1 bits (231), Expect = 5e-21
Identities = 42/59 (71%), Positives = 52/59 (88%)
Frame = +1
Query: 88 EEVAALVVDNGSGMCKAGFAGEDAPRAGFPSIVGRPRHQGVMVGMGQKDSYVGDEATAK 264
+E A+V DNG+GM KAGFAG+DAPRA FPS+VGRPRH+GVMVGM +KD++VGDEA A+
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQAR 64
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 109 bits (262), Expect = 8e-25
Identities = 52/76 (68%), Positives = 56/76 (73%)
Frame = +3
Query: 207 RDGRYGTEGLLCRR*GHSQRGILTLKYPIEHGIVTNWGDMEKIWHHTFYNELRVAPEEQT 386
RDG E + GH+ R ILTLK P+EHGIV NW DMEKIWH+TFYNELRV PEE
Sbjct: 35 RDGLNPNESYVGEE-GHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 387 VLLTEAPLNPKANRXK 434
VLLTEAP NPKANR K
Sbjct: 94 VLLTEAPYNPKANREK 109
Score = 55.6 bits (128), Expect = 1e-08
Identities = 26/53 (49%), Positives = 35/53 (66%)
Frame = +1
Query: 103 LVVDNGSGMCKAGFAGEDAPRAGFPSIVGRPRHQGVMVGMGQKDSYVGDEATA 261
+V D G GM +AGFAG++AP+ FP +VGRPR G+ +SYVG+E A
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHA 51
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 105 bits (253), Expect = 1e-23
Identities = 45/59 (76%), Positives = 53/59 (89%)
Frame = +3
Query: 258 SQRGILTLKYPIEHGIVTNWGDMEKIWHHTFYNELRVAPEEQTVLLTEAPLNPKANRXK 434
++ GILTL YP+EHG+V+NW DMEKIW+HTFY+ELRVAPEE VLLTEAPLNPKA+R K
Sbjct: 17 ARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNPKADREK 75
Score = 26.6 bits (56), Expect = 7.2
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +1
Query: 211 MVGMGQKDSYVGDEATAK 264
MVGM + D +VGD+A A+
Sbjct: 1 MVGMNENDLFVGDDAEAR 18
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 76.2 bits (179), Expect = 9e-15
Identities = 29/54 (53%), Positives = 38/54 (70%)
Frame = +3
Query: 273 LTLKYPIEHGIVTNWGDMEKIWHHTFYNELRVAPEEQTVLLTEAPLNPKANRXK 434
L + YP+ +GIV NW DME +W H FYNEL++ P + +LLT+ PLNP NR K
Sbjct: 66 LDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREK 119
Score = 47.6 bits (108), Expect = 4e-06
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Frame = +1
Query: 103 LVVDNGSGMCKAGFAGEDAPRAGFPSIVGRP--RHQGVMVGMGQKDSYVGD 249
+V DNG+G K GFAGE+ P + FP +VGRP R++ ++ KD VG+
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGE 57
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 58.4 bits (135), Expect = 2e-09
Identities = 25/50 (50%), Positives = 31/50 (62%)
Frame = +3
Query: 279 LKYPIEHGIVTNWGDMEKIWHHTFYNELRVAPEEQTVLLTEAPLNPKANR 428
L YPIEHG V +W ME+ W +N LR PE+ LLTE+PL P +R
Sbjct: 86 LHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTPPESR 135
Score = 32.7 bits (71), Expect = 0.11
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +1
Query: 100 ALVVDNGSGMCKAGFAGEDAPRAGFPSIV 186
A+V+DNG+G K GFAG P P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 55.6 bits (128), Expect = 1e-08
Identities = 24/34 (70%), Positives = 30/34 (88%)
Frame = +1
Query: 88 EEVAALVVDNGSGMCKAGFAGEDAPRAGFPSIVG 189
+EV+A+VVD GS CKAG+AGEDAP+A FPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
Score = 50.8 bits (116), Expect = 4e-07
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +3
Query: 261 QRGILTLKYPIEHGIVTNWGDMEKIWHHTFYNELRVAPEEQTVLLTEAPLNPKANRXK 434
+R + + P + GIVT+W ++ +W H F N L + P E +LL E PLN + R K
Sbjct: 79 RRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 55.2 bits (127), Expect = 2e-08
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +1
Query: 88 EEVAALVVDNGSGMCKAGFAGEDAPRAGFPSIVG 189
+EV+A+VVD GS CKAG+AGEDAP+A FPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
Score = 49.2 bits (112), Expect = 1e-06
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +3
Query: 288 PIEHGIVTNWGDMEKIWHHTFYNELRVAPEEQTVLLTEAPLNPKANRXK 434
PI+ GIV++W ++ IW H F + L + P E +LL E PLN + R K
Sbjct: 94 PIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREK 142
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 42.7 bits (96), Expect = 1e-04
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +3
Query: 279 LKYPIEHGIVTNWGDMEKIWHHTFYNELRVAPEEQTVLLTEAPLN-PKANR 428
++ PI+ G + N +IW H F + L +AP ++LLTEAPL+ P R
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQR 111
Score = 31.1 bits (67), Expect = 0.34
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 103 LVVDNGSGMCKAGFAGEDAPRAGFPSIVGRP 195
+V+DNG G+ KAG GE P P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 42.3 bits (95), Expect = 1e-04
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +1
Query: 103 LVVDNGSGMCKAGFAGEDAPRAGFPSIVGRPRHQGVMVGMGQKDSYVGD 249
+V+DNG+ + G+AGE PR F +IV RPRH+ G+ + VGD
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGD 66
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.5 bits (73), Expect = 0.063
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = -3
Query: 224 PIPTITP*WRGLPTIEGNPARGASSPAKPALHIPEPLSTTNAATSS 87
P P I P RGL +G A +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQG--ATSSSSPAEPLMPVPNDMSTAHRFTSN 332
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 28.7 bits (61), Expect = 1.8
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -3
Query: 224 PIPTITP*WRGLPTIEGNPARGASSPAKP-ALHIPEPLSTTNAATSS 87
P P P G+P G P GA P +P A +P PL+ ++ SS
Sbjct: 213 PSPVNNPLLGGIPKAGGFPPLGAHGPFQPTASPVPTPLAGWMSSPSS 259
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 28.7 bits (61), Expect = 1.8
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -3
Query: 224 PIPTITP*WRGLPTIEGNPARGASSPAKP-ALHIPEPLSTTNAATSS 87
P P P G+P G P GA P +P A +P PL+ ++ SS
Sbjct: 213 PSPVNNPLLGGIPKAGGFPPLGAHGPFQPTASPVPTPLAGWMSSPSS 259
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 27.5 bits (58), Expect = 4.1
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +3
Query: 273 LTLKYPIEHGIVTNWGDMEKIWHHTFYNELRVAP 374
L++KY + H I + W + +IW L+ P
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 27.5 bits (58), Expect = 4.1
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +3
Query: 273 LTLKYPIEHGIVTNWGDMEKIWHHTFYNELRVAP 374
L++KY + H I + W + +IW L+ P
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.1 bits (57), Expect = 5.5
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -3
Query: 200 WRGLPTIEGNPARGASSPAKPALHIPEPLSTTNAATSSSHI 78
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At5g59310.1 68418.m07432 lipid transfer protein 4 (LTP4) identical
to lipid transfer protein 4 from Arabidopsis thaliana
[gi:8571923]; contains Pfam protease inhibitor/seed
storage/LTP family domain PF00234
Length = 112
Score = 26.6 bits (56), Expect = 7.2
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -3
Query: 173 NPARGASSPAKPALHIPEPLST-TNAAT 93
NP+ + P K + IP P+ST TN AT
Sbjct: 83 NPSLASGLPGKCGVSIPYPISTSTNCAT 110
>At1g60060.1 68414.m06766 expressed protein
Length = 386
Score = 26.6 bits (56), Expect = 7.2
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -1
Query: 220 YRPSRPDG-GAFPRSRGTRREEHLLLRNRPCTY 125
Y P + DG GA+ RSRG RR L+ + C +
Sbjct: 42 YPPPKWDGQGAYDRSRGNRRNWILVWEDGFCNF 74
>At3g62850.1 68416.m07061 zinc finger protein-related contains Pfam
profiles PF04396: Protein of unknown function DUF537,
weak hit to PF00096: Zinc finger, C2H2 type
Length = 472
Score = 26.2 bits (55), Expect = 9.5
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -2
Query: 249 ISYIRVL-LSHTDHHALMAGPSHDRGEPGARSIFSC 145
+SYI L +S T +H L RGEP + +FSC
Sbjct: 404 LSYIITLSVSETRNHVLRKCSQSQRGEPSTK-MFSC 438
>At2g22450.1 68415.m02662 riboflavin biosynthesis protein, putative
similar to SP|P50855 Riboflavin biosynthesis protein
ribA [Includes: GTP cyclohydrolase II (EC 3.5.4.25);
3,4-dihydroxy-2-butanone 4-phosphate synthase (DHBP
synthase)] {Actinobacillus pleuropneumoniae}; contains
Pfam profiles PF00925: GTP cyclohydrolase II, PF00926:
3,4-dihydroxy-2-butanone 4-phosphate synthase
Length = 476
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 91 EVAALVVDNGSGMCKAGFAGEDAPRAGFPSIVGR 192
E A VV +G+G+ GED R P +V R
Sbjct: 146 EAMAFVVKHGTGIVCVSMKGEDLERLELPLMVTR 179
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,930,185
Number of Sequences: 28952
Number of extensions: 227645
Number of successful extensions: 698
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 698
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 683042040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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