Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0646
(598 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1257 - 35778078-35778299,35778952-35779069,35779294-357794... 42 4e-04
05_05_0145 - 22690212-22690472,22690701-22690818,22691125-226912... 36 0.019
07_03_1221 + 24968710-24969123 32 0.30
08_01_1029 - 10419090-10419476,10419721-10419822,10420367-104204... 30 1.6
06_01_0721 - 5255422-5255790,5256287-5256660,5256845-5257192,525... 29 2.1
02_02_0520 + 11152718-11153600,11153736-11153917,11154160-111542... 29 2.1
09_06_0187 + 21433842-21433887,21434504-21435246,21435437-214354... 29 2.8
03_06_0347 + 33293915-33294104,33295143-33295284,33295365-332954... 29 3.7
09_02_0393 + 8510089-8510274,8510450-8510806,8510889-8511011,851... 28 4.9
07_03_1507 - 27228032-27228742 28 4.9
07_01_0819 + 6606438-6607373,6608282-6608359,6608543-6609166 28 6.5
03_03_0042 + 14009649-14009866,14011342-14011419,14011791-140119... 28 6.5
12_01_0282 - 2088302-2089081 27 8.6
09_04_0318 - 16620177-16620582,16620686-16620765,16620873-166212... 27 8.6
07_01_1153 - 10842259-10842390,10843348-10845315 27 8.6
03_05_0902 + 28643395-28643708,28643830-28643921,28644342-286444... 27 8.6
03_04_0204 - 18444903-18445054,18445445-18445676,18445765-184458... 27 8.6
02_05_0167 - 26415319-26415494,26415591-26415840,26415909-264159... 27 8.6
>01_06_1257 -
35778078-35778299,35778952-35779069,35779294-35779433,
35779763-35779864,35779971-35780051,35780333-35780402,
35781053-35781114,35781789-35782183,35782303-35782386,
35782949-35783041,35783144-35783195,35783310-35783376,
35783492-35783550,35784209-35784256,35784927-35785040,
35785162-35785335,35785417-35785944,35786025-35786094,
35786668-35786711
Length = 840
Score = 41.9 bits (94), Expect = 4e-04
Identities = 24/81 (29%), Positives = 44/81 (54%)
Frame = +3
Query: 315 RLQVEVEELRRQLTDKQELLAAAAEAIDVLEQQGSVSTDSMEVSMNNSASMKXAADPHDE 494
+L+ E+ +LR+ L DKQE A + + +EQ+ V+ D+ + ++A+ K AA E
Sbjct: 623 QLEQELSDLRQALLDKQEQEQAMLQVLMRVEQEQKVTEDARIFAEQDAAAQKYAAHVLQE 682
Query: 495 TTEQRTPSTIRVRNRSLQVIT 557
E+ S ++ NR++ T
Sbjct: 683 KYEEAMASLAQMENRAVMAET 703
>05_05_0145 -
22690212-22690472,22690701-22690818,22691125-22691261,
22691743-22691844,22691921-22692001,22692325-22692394,
22692628-22692689,22692908-22693320,22693424-22693507,
22694180-22694272,22694376-22694427,22694542-22694608,
22694714-22694772,22694920-22695033,22695174-22695347,
22695444-22695935,22696021-22696090,22696649-22696692
Length = 830
Score = 36.3 bits (80), Expect = 0.019
Identities = 20/77 (25%), Positives = 41/77 (53%)
Frame = +3
Query: 327 EVEELRRQLTDKQELLAAAAEAIDVLEQQGSVSTDSMEVSMNNSASMKXAADPHDETTEQ 506
E+ ELR+ L DKQE A + + +EQ+ ++ ++ + ++A+ + A + E E+
Sbjct: 605 ELSELRQTLLDKQEQEQAMCQVLLRVEQELKIAEEARISAEQDAAAQRYAVNVLQEKYEE 664
Query: 507 RTPSTIRVRNRSLQVIT 557
S ++ NR++ T
Sbjct: 665 AMASLAKMENRAVMAET 681
>07_03_1221 + 24968710-24969123
Length = 137
Score = 32.3 bits (70), Expect = 0.30
Identities = 19/52 (36%), Positives = 23/52 (44%)
Frame = -3
Query: 593 VHPNPHCSLSPLSNHLQTPIPHTYRRRRPLLCCLVMWIGGXFHRSAIVHGHL 438
VH H + + H P PH RR L MW+GG +SA HG L
Sbjct: 69 VHHLVHLARRCPAYHKPPPTPHCCRRCLTLEHARRMWVGGEDDQSANAHGPL 120
>08_01_1029 -
10419090-10419476,10419721-10419822,10420367-10420459,
10420542-10420754,10421625-10421654
Length = 274
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +3
Query: 309 NVRLQVEVEELRRQLTDKQELLAAAAEAIDVLEQQGS 419
+ R+Q+++ +L +QL D++E+ E + L QGS
Sbjct: 217 SARMQLQIADLHKQLEDQKEVARKNEEETEKLRHQGS 253
>06_01_0721 -
5255422-5255790,5256287-5256660,5256845-5257192,
5257369-5257497,5257585-5257658,5257745-5257816,
5257901-5257969,5258059-5258130,5258208-5258279,
5258512-5258583,5258735-5258806,5258887-5258958,
5259050-5259121,5259203-5259274,5259427-5259498,
5259599-5259670,5259764-5259832,5260072-5260143,
5260428-5260499,5260579-5260650,5260919-5260990,
5261015-5261161,5261249-5261378,5262212-5262290
Length = 931
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -3
Query: 569 LSPLSNHLQTPIPHTYRRRRPLLCCLVMWIGGXFHRS 459
+SP L+ + RR L CCL MW+ G + RS
Sbjct: 81 ISPAVGRLKGIVSMYGRRGGVLCCCLEMWLAGAWTRS 117
>02_02_0520 +
11152718-11153600,11153736-11153917,11154160-11154249,
11154343-11154627,11154776-11154994,11155112-11155339
Length = 628
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/53 (22%), Positives = 27/53 (50%)
Frame = +3
Query: 303 EHNVRLQVEVEELRRQLTDKQELLAAAAEAIDVLEQQGSVSTDSMEVSMNNSA 461
EH+ ++ E ++LR+QL DK+ + ++ + Q + +E M ++
Sbjct: 305 EHSQKIFEETDQLRKQLDDKENAIERRSKQLSKFVAQTDIERRKLESEMKKNS 357
>09_06_0187 +
21433842-21433887,21434504-21435246,21435437-21435484,
21435929-21436814,21436967-21437056,21437543-21438417
Length = 895
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +3
Query: 375 AAAAEAIDVLEQQGSVSTDSMEVSMNNSASMKXAADPHDETTEQRTPST 521
AAAA +D+LEQ S +EV+ N S S A P + T+ +T
Sbjct: 43 AAAAVDLDLLEQLLSADNAWLEVAANTSRSPNFFATPSNCLTDASVATT 91
>03_06_0347 +
33293915-33294104,33295143-33295284,33295365-33295485,
33295590-33295652,33296524-33296553,33297411-33297905
Length = 346
Score = 28.7 bits (61), Expect = 3.7
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +3
Query: 288 VQGLLEHNVRLQVEVEELRRQLTDKQELLAAAAEAIDVLEQQGSVSTDSMEVSMNNSASM 467
V+G++ N+ ++ E L DK E L + A+ QG+ E+ M+ S+
Sbjct: 141 VKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQAGTQGTRRQTLGEILMDPDGSV 200
Query: 468 KXAADPH 488
A+PH
Sbjct: 201 AARANPH 207
>09_02_0393 + 8510089-8510274,8510450-8510806,8510889-8511011,
8511209-8511523,8511576-8511682,8512559-8512629,
8512952-8513029,8513390-8513454,8514224-8514274,
8514373-8514414,8514785-8515105,8515154-8517880
Length = 1480
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 26 SFEEKWPHYLERTVLNMLRVYHHRLVQ 106
SF+ KW YL V N LR + LVQ
Sbjct: 1032 SFQSKWRTYLRSCVRNNLRTFFQVLVQ 1058
>07_03_1507 - 27228032-27228742
Length = 236
Score = 28.3 bits (60), Expect = 4.9
Identities = 24/63 (38%), Positives = 29/63 (46%)
Frame = -2
Query: 552 SPADSDSAHVSSTASAALLSRHVDRRXFSSKRYCSWTPPYCRSRLNPAALERRWPQLRPR 373
S + S +A S+ASAA+ VDR + S PP R L A RR P R
Sbjct: 101 SSSSSRTAPPPSSASAAVPVVAVDRGEPKTVPLASPFPPLSRVPLRRAVGRRRRPSGRGC 160
Query: 372 AAP 364
AAP
Sbjct: 161 AAP 163
>07_01_0819 + 6606438-6607373,6608282-6608359,6608543-6609166
Length = 545
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/69 (24%), Positives = 33/69 (47%)
Frame = +3
Query: 225 FSLEIEDLFFEEKLGNGSPPAVQGLLEHNVRLQVEVEELRRQLTDKQELLAAAAEAIDVL 404
FSL + DLF KL + A + LE +++ ++++ ++ D+ E A+ + +
Sbjct: 219 FSLSVADLFPSSKLASMVATAPRRALETRNKMERVIQQIIQERRDQIEADMASGDQVTAA 278
Query: 405 EQQGSVSTD 431
S S D
Sbjct: 279 AGSKSCSLD 287
>03_03_0042 +
14009649-14009866,14011342-14011419,14011791-14011955,
14012071-14012138,14012219-14012258,14013579-14013690,
14013859-14013942
Length = 254
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 267 GNGSPPAVQGLLEHNVRLQVEVEELR 344
G G PPA GLL N+ L E++R
Sbjct: 53 GYGRPPAPTGLLVRNISLTARPEDIR 78
>12_01_0282 - 2088302-2089081
Length = 259
Score = 27.5 bits (58), Expect = 8.6
Identities = 19/74 (25%), Positives = 32/74 (43%)
Frame = -2
Query: 534 SAHVSSTASAALLSRHVDRRXFSSKRYCSWTPPYCRSRLNPAALERRWPQLRPRAAPACQ 355
SA V S + LL D +S +C TPP R+ L+ W Q + A +
Sbjct: 91 SAPVISRSPVLLLFPSPDAADLAS--WCRSTPPPARANPTLLLLDGTWKQAKEMHAASLP 148
Query: 354 LIAVVTLPLLLVIE 313
++ +P+ L ++
Sbjct: 149 FLSSFAVPVSLPVD 162
>09_04_0318 -
16620177-16620582,16620686-16620765,16620873-16621213,
16621298-16621559
Length = 362
Score = 27.5 bits (58), Expect = 8.6
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +3
Query: 297 LLEHNVRLQVEVEELRRQLTDKQELLAAAAEAIDVLEQQGSVSTDSMEVSMNNSASMKXA 476
L E N RLQ E+ ELR T + A + + V+++S + +++A+ A
Sbjct: 248 LTEENRRLQKELAELRALKTVHPFYMHLPATTLSMCPSCERVASNSAPATASSAATSSTA 307
Query: 477 ADP 485
A P
Sbjct: 308 APP 310
>07_01_1153 - 10842259-10842390,10843348-10845315
Length = 699
Score = 27.5 bits (58), Expect = 8.6
Identities = 9/21 (42%), Positives = 17/21 (80%)
Frame = +2
Query: 65 VLNMLRVYHHRLVQVLGSCKK 127
++++ R+ HH LVQ+LG C++
Sbjct: 394 IVSIGRLQHHNLVQLLGYCRR 414
>03_05_0902 +
28643395-28643708,28643830-28643921,28644342-28644443,
28645135-28645185,28645267-28645328,28645664-28645754,
28645911-28645975,28646053-28646247,28646346-28646465,
28646630-28646700,28646839-28647064,28647474-28647524,
28647629-28647857,28648140-28648279,28648527-28648652
Length = 644
Score = 27.5 bits (58), Expect = 8.6
Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 4/97 (4%)
Frame = +3
Query: 276 SPPAVQGLLEHNVRLQVEV-EELRRQLTDKQELLAAAAEAIDVLEQQGS---VSTDSMEV 443
S AV +L+ VR + EEL+R T + ++ AAA E+++ + G + ME
Sbjct: 460 SVDAVHLVLKELVRRSIAATEELKRFPTLQTDIAAAANESLERFREDGRKTVIRLVEMEA 519
Query: 444 SMNNSASMKXAADPHDETTEQRTPSTIRVRNRSLQVI 554
S + D+ TP+ R ++ L+ I
Sbjct: 520 SYLTVEFFRKLPTEPDKGANNNTPANDRYQDNHLRRI 556
>03_04_0204 -
18444903-18445054,18445445-18445676,18445765-18445836,
18446201-18446347,18446559-18446614,18446727-18446832,
18446938-18447025,18447112-18447230,18448975-18449580,
18449803-18449898,18450232-18450422,18453287-18453416,
18453531-18453566
Length = 676
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +1
Query: 151 HDVTNISGISMKQYEEQLNGLRKE 222
+DVT +SG+++++ EEQL KE
Sbjct: 411 NDVTAVSGVNLREEEEQLFSAPKE 434
>02_05_0167 -
26415319-26415494,26415591-26415840,26415909-26415974,
26416457-26416600,26416813-26416868,26416966-26417101,
26417190-26417277,26417379-26417482,26418515-26419180,
26419337-26419432,26419974-26420242,26420334-26420489,
26421153-26421192
Length = 748
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +1
Query: 151 HDVTNISGISMKQYEEQLNGLRKE 222
+DVT +SG+++++ EEQL KE
Sbjct: 462 NDVTAVSGVNLREEEEQLLSAPKE 485
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,700,637
Number of Sequences: 37544
Number of extensions: 317600
Number of successful extensions: 1291
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1291
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1423789920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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