Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0646
(598 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_4013| Best HMM Match : Spindle_assoc (HMM E-Value=4.7e-15) 47 1e-05
SB_26006| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_35254| Best HMM Match : Vicilin_N (HMM E-Value=0.066) 35 0.057
SB_35206| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.012) 32 0.31
SB_23848| Best HMM Match : H-kinase_dim (HMM E-Value=1.5) 32 0.31
SB_6982| Best HMM Match : Plasmodium_HRP (HMM E-Value=5.5) 31 0.71
SB_36438| Best HMM Match : TmoB (HMM E-Value=8.2) 30 1.6
SB_12729| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.3e-08) 30 1.6
SB_14243| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_2028| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_40314| Best HMM Match : Patched (HMM E-Value=1.3e-08) 29 3.8
SB_34153| Best HMM Match : DUF972 (HMM E-Value=0.17) 29 3.8
SB_27949| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_23567| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.00019) 29 3.8
SB_29594| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.4e-06) 28 5.0
SB_29357| Best HMM Match : LRR_1 (HMM E-Value=0.00026) 28 5.0
SB_50497| Best HMM Match : CH (HMM E-Value=0.0084) 28 6.6
SB_26379| Best HMM Match : HALZ (HMM E-Value=1.4) 28 6.6
SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31) 27 8.7
SB_46123| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_22045| Best HMM Match : Amelogenin (HMM E-Value=0.23) 27 8.7
SB_11738| Best HMM Match : SH3_2 (HMM E-Value=3.7e-32) 27 8.7
SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_18255| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
>SB_4013| Best HMM Match : Spindle_assoc (HMM E-Value=4.7e-15)
Length = 134
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/36 (58%), Positives = 27/36 (75%)
Frame = +1
Query: 178 SMKQYEEQLNGLRKENFHLKLRIYFLKKNSATDPRP 285
+MK YE Q++ L+KENF LKLRIYFL++ A D P
Sbjct: 67 TMKDYEFQISELKKENFGLKLRIYFLEERLANDDTP 102
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/62 (33%), Positives = 36/62 (58%)
Frame = +3
Query: 201 VKRIAEGEFSLEIEDLFFEEKLGNGSPPAVQGLLEHNVRLQVEVEELRRQLTDKQELLAA 380
+ + + F L++ F EE+L N P L + N+ L+V VE+ +++L +KQELL
Sbjct: 75 ISELKKENFGLKLRIYFLEERLANDDTP--DDLFKANIELKVTVEKQKKELVEKQELLVK 132
Query: 381 AA 386
A+
Sbjct: 133 AS 134
>SB_26006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 382
Score = 40.3 bits (90), Expect = 0.001
Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Frame = +1
Query: 46 TLPRTHSSKHASSIPSPFSTSPRKLQEMAMPSTEGHDVTNI----SGISMKQYEEQLNGL 213
T PR +S HA + P + + MP T + NI G+S K E + L
Sbjct: 73 TSPRRYS--HADVLERPEDEREAE-DDFIMPRTSADQLENIRTPTGGMSFKDQETLIQEL 129
Query: 214 RKENFHLKLRIYFLKK 261
+KENF LKLR+Y +K
Sbjct: 130 KKENFDLKLRLYMEQK 145
>SB_35254| Best HMM Match : Vicilin_N (HMM E-Value=0.066)
Length = 909
Score = 34.7 bits (76), Expect = 0.057
Identities = 25/98 (25%), Positives = 42/98 (42%)
Frame = +3
Query: 255 EEKLGNGSPPAVQGLLEHNVRLQVEVEELRRQLTDKQELLAAAAEAIDVLEQQGSVSTDS 434
++ G V GL EH +RL+ E + Q+TDK+E + E + ++ S +
Sbjct: 747 QDLASRGQHEDVYGLREHRIRLKEIDVEGKLQVTDKKEEVGRNVERLSTDIKRLSFELED 806
Query: 435 MEVSMNNSASMKXAADPHDETTEQRTPSTIRVRNRSLQ 548
+E + S + H E + +TI SLQ
Sbjct: 807 IEKTQEKSEADLTQFQSHIERERRDEIATIDAMRESLQ 844
>SB_35206| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.012)
Length = 1148
Score = 32.3 bits (70), Expect = 0.31
Identities = 31/98 (31%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Frame = +3
Query: 213 AEGEFSLEIEDLFFEEKLGNGSPPAVQGLLEHNVRLQVEVEELRRQLTDKQELLAAAAE- 389
AEG+ ++L + KL G QGL +LQ EEL++QLTD +E L E
Sbjct: 721 AEGKTIKLTQELDEKMKLIAGIKEEKQGLAAEVKQLQKSSEELQQQLTDTEEKLQMVMEY 780
Query: 390 AIDVLEQQGSVSTDSMEVSMNNSASMKXAADPHDETTE 503
I Q S+ + + M M A+ E TE
Sbjct: 781 PIWTGRQDMSLLPSPIRLLMRFIVVMAGDANGGGEVTE 818
>SB_23848| Best HMM Match : H-kinase_dim (HMM E-Value=1.5)
Length = 106
Score = 32.3 bits (70), Expect = 0.31
Identities = 22/59 (37%), Positives = 30/59 (50%)
Frame = +3
Query: 213 AEGEFSLEIEDLFFEEKLGNGSPPAVQGLLEHNVRLQVEVEELRRQLTDKQELLAAAAE 389
AEG+ ++L + KL G QGL+ LQ EEL++QLTD +E L E
Sbjct: 17 AEGKTIKLTQELDEKMKLIAGIKEEKQGLVAEVEHLQKSSEELQQQLTDTEEKLQMVME 75
>SB_6982| Best HMM Match : Plasmodium_HRP (HMM E-Value=5.5)
Length = 389
Score = 31.1 bits (67), Expect = 0.71
Identities = 23/89 (25%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Frame = +3
Query: 252 FEEKLGNGSPPAVQGLLE-HNVRLQVEVEE-LRRQLTDKQELLAAAAEAIDVLEQQGSVS 425
F L +V+ L+E H +L+ E EE LRR++ +++ L ++ I+ ++
Sbjct: 65 FHSVLTKSQSHSVRFLIEGHKYKLKFEQEERLRREVQQREKELWEESKLINTNANGTDIN 124
Query: 426 TDSMEVSMNNSASMKXAADPHDETTEQRT 512
T++ + +MN A+ A + H T T
Sbjct: 125 TNANDTAMNTHAN-DTAMNTHANDTTMNT 152
>SB_36438| Best HMM Match : TmoB (HMM E-Value=8.2)
Length = 261
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +1
Query: 34 GKMATLPRTHSSKHASSIPSPFSTSPRKLQEMAMPSTEGH 153
GK A L R +H +P P + P L+ + P + GH
Sbjct: 128 GKRAVLLRGRVGRHRGDVPHPATLLPDDLRLLVRPPSTGH 167
>SB_12729| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.3e-08)
Length = 1183
Score = 29.9 bits (64), Expect = 1.6
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +3
Query: 312 VRLQVEVEELRRQLTDKQELLAAAAEAIDVLEQ-QGSVSTDSMEVSMNNSASMKXAADPH 488
V L+ EL +++ D Q+ + A + +V E+ QG+ + MN+S M PH
Sbjct: 559 VLLRKHKTELEKEIEDLQKAIRNAPKE-EVCERCQGTADGSHSDRFMNDSFEMSRPYSPH 617
Query: 489 DETTEQRTPSTIRVRNRSLQ 548
++ T S RV N Q
Sbjct: 618 SDSQWIVTSSNHRVGNHVTQ 637
>SB_14243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1507
Score = 29.5 bits (63), Expect = 2.2
Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
Frame = +3
Query: 207 RIAEGEFSLEIEDLFFEEKLGNGSPPAVQGLLEHNVRLQVEVEELRRQLTDK-QELLAAA 383
R+ + + L++ D + G PAV+ + E LQ EE + + ++ QE + A
Sbjct: 125 RLEQRKAKLDVAD-DASDTSSRGPYPAVEAIQEQMSSLQANYEEEIQTVKEQLQEQMLRA 183
Query: 384 AEAIDVLEQQGSVSTDSMEVSMNNSASMKXAADPHDETTEQRTPSTIRV 530
EA++ EQQ +++ N A + QR ST+RV
Sbjct: 184 NEAVEKYEQQEYQFHENLNELKNTFAQEQEMM----REEHQREMSTLRV 228
>SB_2028| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 681
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +1
Query: 46 TLPRTHSSKH----ASSIPSPFSTSPRKLQEMAMPSTEGHDVTNISGISMKQY 192
T+P TH KH A +IPS + Q ++PST + SGIS+ +
Sbjct: 560 TIPSTHDPKHPRSQAPTIPSTHDPKHPRYQAPSIPSTHYLYSKHSSGISISPF 612
>SB_40314| Best HMM Match : Patched (HMM E-Value=1.3e-08)
Length = 667
Score = 28.7 bits (61), Expect = 3.8
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +1
Query: 40 MATLPRTHSSKHASSIPSPFSTSPRKLQ-EMAMPSTEGHDVTNISGISMKQYEEQLNGLR 216
+ TLPR S+ +S FSTS ++ M P+ +GH+ +S K + ++ L+
Sbjct: 39 LLTLPRVFSAMSKNS-NGTFSTSAVQINYRMQAPNNDGHETKLLS--FEKNFIRKVESLQ 95
Query: 217 KENFHLKLRIYFLKKNSATD 276
++ H +R+++ + S D
Sbjct: 96 RQLSH--VRMFYTAERSLDD 113
>SB_34153| Best HMM Match : DUF972 (HMM E-Value=0.17)
Length = 473
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/59 (27%), Positives = 33/59 (55%)
Frame = +3
Query: 207 RIAEGEFSLEIEDLFFEEKLGNGSPPAVQGLLEHNVRLQVEVEELRRQLTDKQELLAAA 383
+IAE S+ + +++ AV+ + E + +L+ EVE+L ++L + + LL +A
Sbjct: 400 KIAEKRKSMLDQMAIERQEIETAHREAVERIQEEHRKLRKEVEDLHQKLNENKSLLQSA 458
>SB_27949| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 400
Score = 28.7 bits (61), Expect = 3.8
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = +1
Query: 37 KMATLPRT--HSSKHASSIPSPFSTSPRKLQEMAMPSTEGHDV-TNISGISMKQYEEQ 201
K T PRT HS + ++S+ S STS + STE V T I +S+ +EQ
Sbjct: 207 KNVTSPRTPSHSREGSASLSSSVSTSSTLTAPTSPVSTEDESVDTAIGSLSLSDTKEQ 264
>SB_23567| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.00019)
Length = 653
Score = 28.7 bits (61), Expect = 3.8
Identities = 10/24 (41%), Positives = 19/24 (79%)
Frame = +1
Query: 154 DVTNISGISMKQYEEQLNGLRKEN 225
++T+++ IS KQY EQ+N L+ ++
Sbjct: 508 NITDVNSISKKQYTEQVNDLKPDD 531
>SB_29594| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.4e-06)
Length = 1292
Score = 28.3 bits (60), Expect = 5.0
Identities = 24/83 (28%), Positives = 40/83 (48%)
Frame = +3
Query: 222 EFSLEIEDLFFEEKLGNGSPPAVQGLLEHNVRLQVEVEELRRQLTDKQELLAAAAEAIDV 401
+ S E EDL +++L ++GLLE + R ++EEL +L +K L D
Sbjct: 437 QLSQENEDL--KQRLFTVESSDLKGLLEDSYR---KLEELTSELREKDHQLENIRSNYDS 491
Query: 402 LEQQGSVSTDSMEVSMNNSASMK 470
+QQ S S+ N A+++
Sbjct: 492 KQQQTSHLEQSLFALQNKIATLE 514
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/72 (25%), Positives = 34/72 (47%)
Frame = +3
Query: 231 LEIEDLFFEEKLGNGSPPAVQGLLEHNVRLQVEVEELRRQLTDKQELLAAAAEAIDVLEQ 410
LEIEDL + S +Q + + E+EE+R + +++E + +D L++
Sbjct: 895 LEIEDL---KSAAQVSETTLQRINNELINTVSEIEEMRVKAEEEKEKSCSLESQLDELKK 951
Query: 411 QGSVSTDSMEVS 446
+ ME+S
Sbjct: 952 SSEEEKERMELS 963
>SB_29357| Best HMM Match : LRR_1 (HMM E-Value=0.00026)
Length = 521
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/85 (21%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Frame = +3
Query: 252 FEEKLGNGSPPAVQGLLEHNVRLQVEVEELRRQLTDKQELLAAAAEAIDVLEQQGSVSTD 431
F+E + P+V + E EVE + E+ + + +D E++G +
Sbjct: 17 FDEDVKVIDSPSVPEVEEEESNANAEVESKETNAEESPEITSPVEDEVDGTEEKGDSELE 76
Query: 432 SME-VSMNNSASMKXAADPHDETTE 503
+ V ++S+S + D D+ E
Sbjct: 77 VVSPVPSDSSSSSSSSEDEKDDKDE 101
>SB_50497| Best HMM Match : CH (HMM E-Value=0.0084)
Length = 2086
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = +1
Query: 34 GKMATLPRTHSSKHASSIPSPFSTSPRKLQEMAMPSTEGHDVT 162
GK+ PRTH H SI T + A PS DVT
Sbjct: 596 GKVFPTPRTHGDTHFKSIAQKIQTLRHQQWTWAPPSELTLDVT 638
>SB_26379| Best HMM Match : HALZ (HMM E-Value=1.4)
Length = 421
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +3
Query: 297 LLEHNVRLQVEVEELRRQLTDKQELLAAAAEAID 398
L E N L+ EVE LR QLT + +AE I+
Sbjct: 214 LREENRLLKAEVESLRSQLTSSRRQPVPSAEVIN 247
>SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31)
Length = 2122
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +3
Query: 318 LQVEVEELRRQLTDKQELLAAAAEAIDVLEQQGSVSTDSMEVSMNNSASMKXAAD 482
LQV+ + R +L Q + A + ID LE + +ST ++E + MK D
Sbjct: 192 LQVKFDSNRTELVKYQNQVNADLKRIDHLEHELMISTKTVEEHVITINEMKVGKD 246
>SB_46123| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 771
Score = 27.5 bits (58), Expect = 8.7
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +3
Query: 276 SPPAVQGLLEHNVRLQVEVEELRRQLTDKQELLAAAAEAIDVLEQQGSVSTDSMEVSMNN 455
SP AV+G + ++ +E RR + + + AEA+ +Q D E S+NN
Sbjct: 176 SPDAVRGDQIFIINFKLLDDEKRRNIEQNKHKIKCVAEAVLYWGRQCIALWDEGESSVNN 235
Query: 456 SASMKXA 476
K A
Sbjct: 236 KDENKHA 242
>SB_22045| Best HMM Match : Amelogenin (HMM E-Value=0.23)
Length = 149
Score = 27.5 bits (58), Expect = 8.7
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = -3
Query: 590 HPNPHCSLSPLSNHLQTPIPHTYRRR 513
+PNP+ + SP ++ Q+P+P ++ R
Sbjct: 22 NPNPNHAYSPATSTAQSPVPSNHQHR 47
>SB_11738| Best HMM Match : SH3_2 (HMM E-Value=3.7e-32)
Length = 2436
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Frame = +3
Query: 273 GSPPAVQGLLEHNV--RLQVEVEELRRQLTDKQELLAAAAEAIDVLEQQGSVSTDSME 440
G V G + +N+ +QVE ++L Q D + VLEQ G V +E
Sbjct: 2215 GECEGVTGFVPYNMVSEVQVEDDDLANQAPDNSSYYPREETSTQVLEQSGQVEPLDLE 2272
>SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1040
Score = 27.5 bits (58), Expect = 8.7
Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 2/96 (2%)
Frame = +3
Query: 264 LGNGSPPAVQGLLEHNVRLQVEVEELRRQLTDKQELLAAAAEAIDVLEQQGSVSTDSMEV 443
+ N P+V+ + +L+ E L+ Q + A EAI +LEQ T+ ++
Sbjct: 69 IDNDQHPSVESFKQQIDKLEQENRSLKEQQHQQPPASAKHREAIHILEQDLKAKTNRVKE 128
Query: 444 SMNNSASMK--XAADPHDETTEQRTPSTIRVRNRSL 545
+ A + A E Q STIR + L
Sbjct: 129 LERDHAKCRDYQKAVIFQEKELQEARSTIRELRQQL 164
>SB_18255| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1457
Score = 27.5 bits (58), Expect = 8.7
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Frame = +3
Query: 312 VRLQVEVEELRRQLTDKQELLAAA-AEAIDVLE--QQGSVSTDSMEVSMNNSASMKXAAD 482
V L +EV LR+ D+ LLAA ++ D + Q SVS ++ VS + +++ D
Sbjct: 37 VGLAIEVSSLRQLFADQSPLLAAENSDGFDTVSVADQPSVSDLTLSVSRVHQQALRWKND 96
Query: 483 PHDE--TTEQRTPSTIRVRNRSLQ 548
E + Q+ + RN +++
Sbjct: 97 LETERYSAIQQAEKALEDRNFAIR 120
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,884,215
Number of Sequences: 59808
Number of extensions: 352492
Number of successful extensions: 1124
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1121
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1439498375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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