Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0646
(598 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003134-4|AAB54145.2| 395|Caenorhabditis elegans Hypothetical ... 30 1.1
U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical pr... 30 1.4
AF024502-3|AAB70373.1| 836|Caenorhabditis elegans Hypothetical ... 29 1.9
Z92838-4|CAB07410.1| 1012|Caenorhabditis elegans Hypothetical pr... 29 2.5
U37430-4|AAB52675.1| 1616|Caenorhabditis elegans Vitellogenin st... 29 2.5
AC006807-6|AAK84620.2| 230|Caenorhabditis elegans Hypothetical ... 29 2.5
Z72512-4|CAA96666.1| 328|Caenorhabditis elegans Hypothetical pr... 29 3.3
U55373-9|AAV58870.1| 648|Caenorhabditis elegans Hypothetical pr... 28 4.4
U55373-8|AAD34666.1| 805|Caenorhabditis elegans Hypothetical pr... 28 4.4
U55373-7|AAC25890.2| 890|Caenorhabditis elegans Hypothetical pr... 28 4.4
S47168-2|AAB23866.2| 919|Caenorhabditis elegans UNC-5 protein. 28 4.4
S47168-1|AAB23867.2| 947|Caenorhabditis elegans UNC-5 protein. 28 4.4
AF036698-4|AAB88355.1| 919|Caenorhabditis elegans Uncoordinated... 28 4.4
Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z97191-2|CAB10025.1| 481|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z93397-4|CAB07721.1| 363|Caenorhabditis elegans Hypothetical pr... 27 7.7
AF067607-4|AAF98610.2| 390|Caenorhabditis elegans Hypothetical ... 27 7.7
>AF003134-4|AAB54145.2| 395|Caenorhabditis elegans Hypothetical
protein ZC581.7 protein.
Length = 395
Score = 30.3 bits (65), Expect = 1.1
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +3
Query: 204 KRIAEGEFSLEIEDLFFEEKLGNGSPPAVQ-GLLEHNVRLQVEVEELRRQLTDKQELLAA 380
+ I +G+F L +D+ F++KLG+G+ V G L N ++ V++L + D++ L
Sbjct: 106 RAIPKGKFQLMHKDVDFKKKLGSGAYGTVYLGRLTKN-NTKIAVKKLDTEGNDEESLAEM 164
Query: 381 AAEA 392
EA
Sbjct: 165 MKEA 168
>U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical
protein F41H10.4 protein.
Length = 575
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/48 (31%), Positives = 30/48 (62%)
Frame = +3
Query: 297 LLEHNVRLQVEVEELRRQLTDKQELLAAAAEAIDVLEQQGSVSTDSME 440
++E N+R++ E+EELRR+ E + + A V+++ +S D++E
Sbjct: 197 VVEENLRIRKEIEELRRENEGIAEKMKESNNA--VMDENKKLSDDNLE 242
>AF024502-3|AAB70373.1| 836|Caenorhabditis elegans Hypothetical
protein M151.3 protein.
Length = 836
Score = 29.5 bits (63), Expect = 1.9
Identities = 17/70 (24%), Positives = 33/70 (47%)
Frame = +1
Query: 67 SKHASSIPSPFSTSPRKLQEMAMPSTEGHDVTNISGISMKQYEEQLNGLRKENFHLKLRI 246
S H+ PS +++ + P G D+T +K+ ++++GLR+EN L+
Sbjct: 368 SFHSRQQPSSLASTASDTGNLDRPRFSGSDLT----FEIKKLNDEISGLRQENEELRASN 423
Query: 247 YFLKKNSATD 276
+L+ D
Sbjct: 424 EYLRTAHGVD 433
>Z92838-4|CAB07410.1| 1012|Caenorhabditis elegans Hypothetical
protein T03D8.5 protein.
Length = 1012
Score = 29.1 bits (62), Expect = 2.5
Identities = 15/62 (24%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 103 TSPRKLQEMAMPSTEGHDVTNISGISMKQYEEQLN-GLRKENFHLKLRIYFLKKNSATDP 279
T+P +++ +P T+ D+ + + I + ++ L E F ++ +Y +KK + P
Sbjct: 648 TAPEHIRDTNLPITKEMDIYSFAIICSELITKKSAWDLENETFDIEELVYKIKKGGRSPP 707
Query: 280 RP 285
RP
Sbjct: 708 RP 709
>U37430-4|AAB52675.1| 1616|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 1 protein.
Length = 1616
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 309 NVRLQVEVEELRRQLTDKQELLAAAAEAIDVL 404
N L + V +L + DK++LL EAID L
Sbjct: 519 NAGLDISVNQLNEIIVDKRQLLPVRKEAIDAL 550
>AC006807-6|AAK84620.2| 230|Caenorhabditis elegans Hypothetical
protein Y58A7A.6 protein.
Length = 230
Score = 29.1 bits (62), Expect = 2.5
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +3
Query: 444 SMNNSASMKXAADPHDETTEQRTPSTIRVRNRS 542
S +++ S + A+PHDE T+++ R NR+
Sbjct: 6 SSSSNGSSQITANPHDEKTKEKVEKLFRQNNRT 38
>Z72512-4|CAA96666.1| 328|Caenorhabditis elegans Hypothetical
protein R07B5.6 protein.
Length = 328
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -2
Query: 360 CQLIAVVTLPLLLVIERCALRDLVPRAGIRCRVFLQKIN 244
C I +++LPLL +I C ++P G CR +N
Sbjct: 144 CSKIMIISLPLLFLIPLCCTSFMIPALGY-CRQMGSPLN 181
>U55373-9|AAV58870.1| 648|Caenorhabditis elegans Hypothetical
protein F26F12.3c protein.
Length = 648
Score = 28.3 bits (60), Expect = 4.4
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +3
Query: 288 VQGLLEHNVRLQVEVEELRRQLTDKQELLAAAAEAIDVLEQQGS---VSTDSMEVSMNNS 458
++GLL+H LQ V L + + + +E AA E IDV Q S + D + + N+S
Sbjct: 182 LRGLLKHAANLQEVVAILSKLVAEWKEGGVAAPECIDVHRSQKSRFELKRDFFQPAFNSS 241
>U55373-8|AAD34666.1| 805|Caenorhabditis elegans Hypothetical
protein F26F12.3b protein.
Length = 805
Score = 28.3 bits (60), Expect = 4.4
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +3
Query: 288 VQGLLEHNVRLQVEVEELRRQLTDKQELLAAAAEAIDVLEQQGS---VSTDSMEVSMNNS 458
++GLL+H LQ V L + + + +E AA E IDV Q S + D + + N+S
Sbjct: 339 LRGLLKHAANLQEVVAILSKLVAEWKEGGVAAPECIDVHRSQKSRFELKRDFFQPAFNSS 398
>U55373-7|AAC25890.2| 890|Caenorhabditis elegans Hypothetical
protein F26F12.3a protein.
Length = 890
Score = 28.3 bits (60), Expect = 4.4
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +3
Query: 288 VQGLLEHNVRLQVEVEELRRQLTDKQELLAAAAEAIDVLEQQGS---VSTDSMEVSMNNS 458
++GLL+H LQ V L + + + +E AA E IDV Q S + D + + N+S
Sbjct: 424 LRGLLKHAANLQEVVAILSKLVAEWKEGGVAAPECIDVHRSQKSRFELKRDFFQPAFNSS 483
>S47168-2|AAB23866.2| 919|Caenorhabditis elegans UNC-5 protein.
Length = 919
Score = 28.3 bits (60), Expect = 4.4
Identities = 17/68 (25%), Positives = 27/68 (39%)
Frame = -3
Query: 215 RNPFNCSSYCFMLIPLIFVTS*PSVDGIAISCNFRGLVLNGDGILEACLELCVLGNVAIF 36
R PF YC + DG + C +LN G L C+E + G
Sbjct: 683 RRPFELRVYCVPETGAAMESVWKQEDGSRLLCESNDFILNEKGNLCICIEDVIPGFSCDG 742
Query: 35 PQMIVINQ 12
P+++ I++
Sbjct: 743 PEVVEISE 750
>S47168-1|AAB23867.2| 947|Caenorhabditis elegans UNC-5 protein.
Length = 947
Score = 28.3 bits (60), Expect = 4.4
Identities = 17/68 (25%), Positives = 27/68 (39%)
Frame = -3
Query: 215 RNPFNCSSYCFMLIPLIFVTS*PSVDGIAISCNFRGLVLNGDGILEACLELCVLGNVAIF 36
R PF YC + DG + C +LN G L C+E + G
Sbjct: 711 RRPFELRVYCVPETGAAMESVWKQEDGSRLLCESNDFILNEKGNLCICIEDVIPGFSCDG 770
Query: 35 PQMIVINQ 12
P+++ I++
Sbjct: 771 PEVVEISE 778
>AF036698-4|AAB88355.1| 919|Caenorhabditis elegans Uncoordinated
protein 5, isoform a protein.
Length = 919
Score = 28.3 bits (60), Expect = 4.4
Identities = 17/68 (25%), Positives = 27/68 (39%)
Frame = -3
Query: 215 RNPFNCSSYCFMLIPLIFVTS*PSVDGIAISCNFRGLVLNGDGILEACLELCVLGNVAIF 36
R PF YC + DG + C +LN G L C+E + G
Sbjct: 683 RRPFELRVYCVPETGAAMESVWKQEDGSRLLCESNDFILNEKGNLCICIEDVIPGFSCDG 742
Query: 35 PQMIVINQ 12
P+++ I++
Sbjct: 743 PEVVEISE 750
>Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical protein
C38D4.3 protein.
Length = 1784
Score = 27.9 bits (59), Expect = 5.8
Identities = 22/83 (26%), Positives = 38/83 (45%)
Frame = +3
Query: 300 LEHNVRLQVEVEELRRQLTDKQELLAAAAEAIDVLEQQGSVSTDSMEVSMNNSASMKXAA 479
LE +++LQ E++E + E A + +E+ S ++ S+ S S
Sbjct: 1312 LESSIKLQEELQEEPDIVPTGDEDTADKVQE-QAVEEDRPPSRNTRSSSVQKSTSQVEDR 1370
Query: 480 DPHDETTEQRTPSTIRVRNRSLQ 548
DP + E+R PS R+ S+Q
Sbjct: 1371 DPKELVEEERPPSR-NTRSASVQ 1392
>Z97191-2|CAB10025.1| 481|Caenorhabditis elegans Hypothetical
protein H32K16.1 protein.
Length = 481
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = -3
Query: 107 LVLNGDGILEACLELCVLGNVAIFPQMIVINQQFL 3
++LN G ++ LC+ GNV IF +++I ++ +
Sbjct: 209 MLLNFIGHMKLLTILCLFGNVIIFAAIVLITKELM 243
>Z93397-4|CAB07721.1| 363|Caenorhabditis elegans Hypothetical
protein ZC482.7 protein.
Length = 363
Score = 27.5 bits (58), Expect = 7.7
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +1
Query: 55 RTHSSKHASSIPSPFSTSPRKLQEMAMPSTEG-HDVTNISGISMKQYEEQLNGLRKENFH 231
R +S +P+P ++ ++QE+A + E H ++ + Y E LN L +NFH
Sbjct: 118 RNNSQMTRLGLPAPDISTVGQIQEIAFINFENLHKDFCLTVAEVVHYFE-LNKLSVDNFH 176
Query: 232 LKL 240
+KL
Sbjct: 177 VKL 179
>AF067607-4|AAF98610.2| 390|Caenorhabditis elegans Hypothetical
protein C18H7.4 protein.
Length = 390
Score = 27.5 bits (58), Expect = 7.7
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +3
Query: 204 KRIAEGEFSLEIEDLFFEEKLGNGSPPAV-QGLLEHNVRLQVEVEELRRQLTDKQELLAA 380
+ IA+G+F L D+ F++++G+G+ V +G L + V V++L + TD++ L
Sbjct: 108 RAIAKGKFQLMHTDVNFKKQIGSGAYGTVYRGRLVKTNAI-VAVKKLDTEGTDEEGLTDM 166
Query: 381 AAEA 392
EA
Sbjct: 167 MKEA 170
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,026,704
Number of Sequences: 27780
Number of extensions: 258416
Number of successful extensions: 1058
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1057
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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