Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0645
         (740 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0099 - 1202668-1203023,1203097-1206037                           29   3.9  
02_02_0550 - 11413912-11414079,11414338-11414513,11414617-114146...    29   3.9  

>10_01_0099 - 1202668-1203023,1203097-1206037
          Length = 1098

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
 Frame = -1

Query: 614 NIYMSVGLPTTVAGALIMRTLVGVRNNNVNFKWPAS-GRVQLVIYNLSISTN-YTG 453
           N + S  LP T+     ++ ++ V NN ++   P   GR+Q++++ L++S N +TG
Sbjct: 623 NNHFSGNLPATIGNLASIQIMLDVSNNKLDGLLPQDFGRMQMLVF-LNLSHNQFTG 677


>02_02_0550 -
           11413912-11414079,11414338-11414513,11414617-11414629,
           11414844-11414871,11415447-11415784
          Length = 240

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = +2

Query: 86  LKPIVRGRSQGYLKLWVSHQYRISNFNLSL 175
           +K I++G S GY K+W  H+YR  N N+ +
Sbjct: 121 IKVILQGLSMGYKKVW-WHKYRNLNKNIDI 149


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,012,637
Number of Sequences: 37544
Number of extensions: 290757
Number of successful extensions: 397
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 397
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1957111448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)