Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0645
         (740 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   4.0  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    23   4.0  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   4.0  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   9.2  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    21   9.2  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   9.2  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 260 IDYTLLKRWT*ILTMYSERAYG 325
           +D      W+ + T+YSE +YG
Sbjct: 130 VDVVKSANWSYVSTVYSEGSYG 151


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +2

Query: 206 LHLDAGARYSHSKRKRRNIDYTLLKRWT*ILTMYSE 313
           L+L   A  +H+  K +   Y L+K W   +  Y+E
Sbjct: 252 LNLSLHASLNHTLTKDQPETYELVKEWRDFVDNYAE 287


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 260 IDYTLLKRWT*ILTMYSERAYG 325
           +D      W+ + T+YSE +YG
Sbjct: 220 VDVVKSANWSYVSTVYSEGSYG 241


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +1

Query: 619 YPLSTCIFYMDT 654
           YPL+ C++Y  T
Sbjct: 298 YPLTGCLYYFST 309


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 150 RYW*LTHSFKYP 115
           RYW +T  F YP
Sbjct: 144 RYWAITDPFTYP 155


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 12/35 (34%), Positives = 15/35 (42%)
 Frame = +1

Query: 226 TLFTLKTEAPEHRLYTVKKMDIDTNYV*RAGIRPR 330
           TL     E P      +K+ DI  NY+ R    PR
Sbjct: 705 TLARSLMEGPRMTAEQLKRTDIIHNYIMRGEASPR 739


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,301
Number of Sequences: 438
Number of extensions: 4165
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)