Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0643
(480 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 162 2e-40
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 162 2e-40
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 161 3e-40
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 159 8e-40
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 138 3e-33
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 130 8e-31
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 85 4e-17
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 85 4e-17
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 84 7e-17
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 83 2e-16
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 82 2e-16
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 82 2e-16
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 82 3e-16
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 2e-15
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 2e-15
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 4e-14
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 74 7e-14
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 72 2e-13
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 66 1e-11
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 57 9e-09
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 1e-08
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 51 6e-07
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 50 1e-06
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 4e-05
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 42 3e-04
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 38 0.006
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 38 0.006
SB_49423| Best HMM Match : Dicty_CAD (HMM E-Value=6.4) 33 0.12
SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23) 31 0.65
SB_23807| Best HMM Match : DUF885 (HMM E-Value=6.6e-16) 28 4.6
SB_48387| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.1
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 162 bits (393), Expect = 2e-40
Identities = 74/75 (98%), Positives = 74/75 (98%)
Frame = +2
Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDNFVFRQSGAGNNWAKGHYTEGAELVDSVLDVVRKEA 433
LVDLEPGTMDSVRSGPFGQIFRPDNFVF QSGAGNNWAKGHYTEGAELVDSVLDVVRKEA
Sbjct: 65 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEA 124
Query: 434 ESCDCLQGFQLTHSL 478
ESCDCLQGFQLTHSL
Sbjct: 125 ESCDCLQGFQLTHSL 139
Score = 138 bits (333), Expect = 3e-33
Identities = 60/64 (93%), Positives = 62/64 (96%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 242
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 243 PRAI 254
PRAI
Sbjct: 61 PRAI 64
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 162 bits (393), Expect = 2e-40
Identities = 74/75 (98%), Positives = 74/75 (98%)
Frame = +2
Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDNFVFRQSGAGNNWAKGHYTEGAELVDSVLDVVRKEA 433
LVDLEPGTMDSVRSGPFGQIFRPDNFVF QSGAGNNWAKGHYTEGAELVDSVLDVVRKEA
Sbjct: 278 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEA 337
Query: 434 ESCDCLQGFQLTHSL 478
ESCDCLQGFQLTHSL
Sbjct: 338 ESCDCLQGFQLTHSL 352
Score = 142 bits (345), Expect = 1e-34
Identities = 63/73 (86%), Positives = 67/73 (91%)
Frame = +3
Query: 36 IYSSHK*NKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYY 215
+YSS KMREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYY
Sbjct: 205 VYSSKLLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYY 264
Query: 216 NEASGGKYVPRAI 254
NEA+GGKYVPRA+
Sbjct: 265 NEATGGKYVPRAV 277
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 161 bits (391), Expect = 3e-40
Identities = 73/75 (97%), Positives = 74/75 (98%)
Frame = +2
Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDNFVFRQSGAGNNWAKGHYTEGAELVDSVLDVVRKEA 433
LVDLEPGTMDSVRSGPFGQIFRPDNFVF QSGAGNNWAKGHYTEGAELVDSVLDVVRKEA
Sbjct: 10 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEA 69
Query: 434 ESCDCLQGFQLTHSL 478
ESCDC+QGFQLTHSL
Sbjct: 70 ESCDCIQGFQLTHSL 84
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 159 bits (387), Expect = 8e-40
Identities = 71/75 (94%), Positives = 74/75 (98%)
Frame = +2
Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDNFVFRQSGAGNNWAKGHYTEGAELVDSVLDVVRKEA 433
L+DLEPGTMDSVRSGPFGQIFRPDNFVF QSGAGNNWAKGHYTEGAEL+DSVLDVVRKEA
Sbjct: 65 LIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLDVVRKEA 124
Query: 434 ESCDCLQGFQLTHSL 478
ESCDC+QGFQLTHSL
Sbjct: 125 ESCDCIQGFQLTHSL 139
Score = 134 bits (323), Expect = 5e-32
Identities = 57/64 (89%), Positives = 62/64 (96%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 242
MREIV +QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 243 PRAI 254
PR++
Sbjct: 61 PRSV 64
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 138 bits (333), Expect = 3e-33
Identities = 60/64 (93%), Positives = 62/64 (96%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 242
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 243 PRAI 254
PRAI
Sbjct: 61 PRAI 64
Score = 64.1 bits (149), Expect = 6e-11
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +2
Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDNFVF 337
LVDLEPGTMDSVRSGPFGQIFRPDNFVF
Sbjct: 65 LVDLEPGTMDSVRSGPFGQIFRPDNFVF 92
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 130 bits (313), Expect = 8e-31
Identities = 55/75 (73%), Positives = 65/75 (86%)
Frame = +2
Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDNFVFRQSGAGNNWAKGHYTEGAELVDSVLDVVRKEA 433
LVDLEPGTMD+VR GP G +FRPDNFV QSGA NNWAKGHY+EGAEL+D++ DV+RKEA
Sbjct: 21 LVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELIDNIFDVLRKEA 80
Query: 434 ESCDCLQGFQLTHSL 478
E+CDC+QG QL +L
Sbjct: 81 ENCDCMQGVQLIQAL 95
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 84.6 bits (200), Expect = 4e-17
Identities = 38/73 (52%), Positives = 50/73 (68%)
Frame = +2
Query: 257 VDLEPGTMDSVRSGPFGQIFRPDNFVFRQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 436
VDLEP +D VR+G + Q+F P+ V + A NN+A+GHYT G E+VD VLD +RK A+
Sbjct: 68 VDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLDRIRKLAD 127
Query: 437 SCDCLQGFQLTHS 475
C LQGF + HS
Sbjct: 128 QCTGLQGFLIFHS 140
Score = 84.2 bits (199), Expect = 5e-17
Identities = 37/73 (50%), Positives = 50/73 (68%)
Frame = +2
Query: 257 VDLEPGTMDSVRSGPFGQIFRPDNFVFRQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 436
VDLEP +D VR+G + Q+F P+ + + A NN+A+GHYT G E+VD VLD +RK A+
Sbjct: 501 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLVLDRIRKLAD 560
Query: 437 SCDCLQGFQLTHS 475
C LQGF + HS
Sbjct: 561 QCTGLQGFLIFHS 573
Score = 56.4 bits (130), Expect = 1e-08
Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 236
MRE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 237 YVPRAI 254
+VPRA+
Sbjct: 61 HVPRAV 66
Score = 54.4 bits (125), Expect = 5e-08
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +3
Query: 66 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 239
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 494
Query: 240 VPRAI 254
VPRA+
Sbjct: 495 VPRAV 499
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 84.6 bits (200), Expect = 4e-17
Identities = 37/73 (50%), Positives = 50/73 (68%)
Frame = +2
Query: 257 VDLEPGTMDSVRSGPFGQIFRPDNFVFRQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 436
VDLEP +D VR+G + Q+F P+ + + A NN+A+GHYT G EL+D VLD +RK A+
Sbjct: 653 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLAD 712
Query: 437 SCDCLQGFQLTHS 475
C LQGF + HS
Sbjct: 713 QCTGLQGFLIFHS 725
Score = 83.8 bits (198), Expect = 7e-17
Identities = 37/73 (50%), Positives = 50/73 (68%)
Frame = +2
Query: 257 VDLEPGTMDSVRSGPFGQIFRPDNFVFRQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 436
VDLEP +D VR+G + Q+F P+ + + A NN+A+GHYT G E+VD VLD +RK A+
Sbjct: 132 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 191
Query: 437 SCDCLQGFQLTHS 475
C LQGF + HS
Sbjct: 192 QCTGLQGFLIFHS 204
Score = 54.8 bits (126), Expect = 3e-08
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 236
+RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 237 YVPRAI 254
+VPRA+
Sbjct: 646 HVPRAV 651
Score = 54.4 bits (125), Expect = 5e-08
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +3
Query: 66 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 239
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 240 VPRAI 254
VPRA+
Sbjct: 574 VPRAV 578
Score = 54.0 bits (124), Expect = 6e-08
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +3
Query: 66 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 239
RE + + GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 66 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 125
Query: 240 VPRAI 254
VPRA+
Sbjct: 126 VPRAV 130
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 83.8 bits (198), Expect = 7e-17
Identities = 36/73 (49%), Positives = 50/73 (68%)
Frame = +2
Query: 257 VDLEPGTMDSVRSGPFGQIFRPDNFVFRQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 436
VDLEP +D VR+G + Q+F P+ + + A NN+A+GHYT G E++D VLD +RK A+
Sbjct: 67 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDRIRKLAD 126
Query: 437 SCDCLQGFQLTHS 475
C LQGF + HS
Sbjct: 127 QCTGLQGFLIFHS 139
Score = 54.4 bits (125), Expect = 5e-08
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +3
Query: 66 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 239
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 240 VPRAI 254
VPRA+
Sbjct: 61 VPRAV 65
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 82.6 bits (195), Expect = 2e-16
Identities = 35/72 (48%), Positives = 50/72 (69%)
Frame = +2
Query: 260 DLEPGTMDSVRSGPFGQIFRPDNFVFRQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAES 439
DLEP +D VR+G + Q+F P+ + + A NN+A+GHYT G E++D+VLD +RK A+
Sbjct: 69 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLDRLRKLADG 128
Query: 440 CDCLQGFQLTHS 475
C LQGF + HS
Sbjct: 129 CTGLQGFLIFHS 140
Score = 55.2 bits (127), Expect = 3e-08
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 236
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 237 YVPRAISSTWSP 272
+VPRA+ P
Sbjct: 61 HVPRAVFCDLEP 72
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 82.2 bits (194), Expect = 2e-16
Identities = 35/72 (48%), Positives = 49/72 (68%)
Frame = +2
Query: 260 DLEPGTMDSVRSGPFGQIFRPDNFVFRQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAES 439
DLEP +D VR+G + Q+F P+ + + A NN+A+GHYT G E++D VLD +RK A+
Sbjct: 873 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLVLDRIRKLADQ 932
Query: 440 CDCLQGFQLTHS 475
C LQGF + HS
Sbjct: 933 CTGLQGFLIFHS 944
Score = 81.4 bits (192), Expect = 4e-16
Identities = 36/73 (49%), Positives = 49/73 (67%)
Frame = +2
Query: 257 VDLEPGTMDSVRSGPFGQIFRPDNFVFRQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 436
VDLEP +D VR+G + Q+F P+ + + A NN+A+GHYT G E +D VLD +RK A+
Sbjct: 439 VDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLDRLRKLAD 498
Query: 437 SCDCLQGFQLTHS 475
C LQGF + HS
Sbjct: 499 GCTGLQGFLIFHS 511
Score = 54.0 bits (124), Expect = 6e-08
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +3
Query: 66 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 239
RE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK+
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 865
Query: 240 VPRAISSTWSP 272
VPRA+ + P
Sbjct: 866 VPRAVFADLEP 876
Score = 53.2 bits (122), Expect = 1e-07
Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +3
Query: 66 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 239
RE + I GQ G QIG WE+ EHGI P G D + + N ++ E GK+
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 240 VPRAI 254
VPRA+
Sbjct: 433 VPRAV 437
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 82.2 bits (194), Expect = 2e-16
Identities = 34/73 (46%), Positives = 50/73 (68%)
Frame = +2
Query: 257 VDLEPGTMDSVRSGPFGQIFRPDNFVFRQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 436
VDLEP +D +R+G + Q+F P+ + + A NN+A+GHYT G + +D+VLD +RK A+
Sbjct: 486 VDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNVLDRIRKLAD 545
Query: 437 SCDCLQGFQLTHS 475
C LQGF + HS
Sbjct: 546 QCSGLQGFLVFHS 558
Score = 79.4 bits (187), Expect = 1e-15
Identities = 34/72 (47%), Positives = 49/72 (68%)
Frame = +2
Query: 260 DLEPGTMDSVRSGPFGQIFRPDNFVFRQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAES 439
DLEP +D VR+G + Q+F P+ + + A NN+A+GHYT G +L++ VLD +RK A+
Sbjct: 54 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRLRKLADQ 113
Query: 440 CDCLQGFQLTHS 475
C LQGF + HS
Sbjct: 114 CTGLQGFLIFHS 125
Score = 54.0 bits (124), Expect = 6e-08
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +3
Query: 66 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 239
RE V I GQ G Q+G WE+ EHGI P G D + + N +++E GK+
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 479
Query: 240 VPRAISSTWSPA 275
VPRA+ P+
Sbjct: 480 VPRAVFVDLEPS 491
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +3
Query: 108 IGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAISSTWSP 272
+G WE+ EHGI P G D + + N +++E GK+VPRA+ P
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEP 57
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 81.8 bits (193), Expect = 3e-16
Identities = 36/73 (49%), Positives = 49/73 (67%)
Frame = +2
Query: 257 VDLEPGTMDSVRSGPFGQIFRPDNFVFRQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 436
VDLEP +D VR+G + Q+F P+ + + A NN+A+GHYT G E++D VLD RK A+
Sbjct: 68 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRCRKLAD 127
Query: 437 SCDCLQGFQLTHS 475
C LQGF + HS
Sbjct: 128 QCTGLQGFLIFHS 140
Score = 55.2 bits (127), Expect = 3e-08
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 236
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 237 YVPRAI 254
+VPRA+
Sbjct: 61 HVPRAV 66
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 79.0 bits (186), Expect = 2e-15
Identities = 34/73 (46%), Positives = 48/73 (65%)
Frame = +2
Query: 257 VDLEPGTMDSVRSGPFGQIFRPDNFVFRQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 436
VDLEP +D +R+G + Q+F P+ + + A NN+A+GHYT G E +D LD +RK A+
Sbjct: 33 VDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLAD 92
Query: 437 SCDCLQGFQLTHS 475
C LQGF + HS
Sbjct: 93 QCTGLQGFLIFHS 105
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 78.6 bits (185), Expect = 2e-15
Identities = 33/74 (44%), Positives = 49/74 (66%)
Frame = +2
Query: 254 LVDLEPGTMDSVRSGPFGQIFRPDNFVFRQSGAGNNWAKGHYTEGAELVDSVLDVVRKEA 433
LVDLEP +D VR+G + ++ P+ + + A NN+A+GHYT G E+V+ V+D +RK
Sbjct: 978 LVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKEMVEVVMDKIRKMT 1037
Query: 434 ESCDCLQGFQLTHS 475
+ C LQGF + HS
Sbjct: 1038 DQCSGLQGFLIFHS 1051
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 74.5 bits (175), Expect = 4e-14
Identities = 32/65 (49%), Positives = 44/65 (67%)
Frame = +2
Query: 281 DSVRSGPFGQIFRPDNFVFRQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGF 460
D VR+G + Q+F P+ + + A NN+A+GHYT G EL+D VLD +RK A+ C LQGF
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 72
Query: 461 QLTHS 475
+ HS
Sbjct: 73 LIFHS 77
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 73.7 bits (173), Expect = 7e-14
Identities = 31/46 (67%), Positives = 38/46 (82%)
Frame = +2
Query: 341 QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSL 478
Q+ A NNWAKG YTEGAEL+DS +D +RK AE+CD +QGFQ+ HSL
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQIAHSL 47
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 72.1 bits (169), Expect = 2e-13
Identities = 31/63 (49%), Positives = 43/63 (68%)
Frame = +2
Query: 287 VRSGPFGQIFRPDNFVFRQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQL 466
VR+G + Q+F P+ + + A NN+A+GHYT G EL+D VLD +RK A+ C LQGF +
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGFLI 62
Query: 467 THS 475
HS
Sbjct: 63 FHS 65
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 66.5 bits (155), Expect = 1e-11
Identities = 28/63 (44%), Positives = 41/63 (65%)
Frame = +2
Query: 287 VRSGPFGQIFRPDNFVFRQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQL 466
+R+G + Q+F P+ + + A NN+A+GHYT G E +D LD +RK A+ C LQGF +
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGFLI 62
Query: 467 THS 475
HS
Sbjct: 63 FHS 65
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 59.7 bits (138), Expect = 1e-09
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQ--LERINVYYNEASGGK 236
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GGK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 237 YVPRAISSTWSPA 275
+VPRA+ P+
Sbjct: 61 HVPRAVFVDLEPS 73
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 56.8 bits (131), Expect = 9e-09
Identities = 25/52 (48%), Positives = 34/52 (65%)
Frame = +2
Query: 320 PDNFVFRQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHS 475
P+ + + A NN+A+GHYT G + VD VLD +RK A+ C LQGF + HS
Sbjct: 79 PEQLITGKEDAANNYARGHYTIGKQQVDQVLDRLRKLADQCSGLQGFFIFHS 130
Score = 56.0 bits (129), Expect = 2e-08
Identities = 30/78 (38%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 236
MRE + I GQ G QIG WE+ EHGI P G D + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 237 YVPRAISSTWSPAPWTLS 290
+VPRA+ P LS
Sbjct: 61 HVPRAVFVDLEPTVVALS 78
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 56.4 bits (130), Expect = 1e-08
Identities = 23/47 (48%), Positives = 33/47 (70%)
Frame = +2
Query: 287 VRSGPFGQIFRPDNFVFRQSGAGNNWAKGHYTEGAELVDSVLDVVRK 427
VR+G + Q+F P+ + + A NN+A+GHYT G EL+D VLD +RK
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 49
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 50.8 bits (116), Expect = 6e-07
Identities = 22/47 (46%), Positives = 30/47 (63%)
Frame = +2
Query: 338 RQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSL 478
++ G+GNNWA G G + +D VLD+V++E E CD L GF SL
Sbjct: 101 QKRGSGNNWAHGFSEHGPKSIDKVLDLVQREVEKCDRLDGFLTLLSL 147
Score = 32.3 bits (70), Expect = 0.21
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +3
Query: 72 IVHIQAGQCGNQIGAKFWEIISDE 143
IV +Q GQCGNQIG + +++I ++
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVED 26
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 49.6 bits (113), Expect = 1e-06
Identities = 20/47 (42%), Positives = 29/47 (61%)
Frame = +2
Query: 287 VRSGPFGQIFRPDNFVFRQSGAGNNWAKGHYTEGAELVDSVLDVVRK 427
VR G + +F PD + + A NN+A+GHYT G E +D L+ +RK
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRK 49
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 46.0 bits (104), Expect = 2e-05
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Frame = +3
Query: 63 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLER----INVYYNEASG 230
MRE + I GQ G QIG WE+ EHGI P G H SD +R + +++E +
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDG--HMPSDQSADRCDDSFSTFFSETAS 253
Query: 231 GKY 239
GK+
Sbjct: 254 GKH 256
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 44.8 bits (101), Expect = 4e-05
Identities = 18/35 (51%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +3
Query: 120 FWEIISDEHGIDPTGAYHG-DSDLQLERINVYYNE 221
FWE+I++EHGIDP G S +Q +R+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 41.5 bits (93), Expect = 3e-04
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
Frame = +2
Query: 257 VDLEPGTMDSVR--SGPFGQIFRPDNFVFRQSGAGNNWAKGHYTE-----GAELVDSVLD 415
VD E + S R G GQ R N + + G GNN+A G++ G L+ +D
Sbjct: 44 VDSESKVIASNRRSDGVHGQN-RDSNIIAGRRGRGNNFALGYHGNSIDEGGTSLLHMTMD 102
Query: 416 VVRKEAESCDCLQGFQLTHSL 478
+RKE E CD G + HSL
Sbjct: 103 AMRKEVERCDSFAGTIVMHSL 123
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 37.5 bits (83), Expect = 0.006
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +2
Query: 230 RQVRAPRHLVDLEPGTMDSVRSGPFGQIFRPDNFVFRQSGAGNNW 364
+ ++A L+D+E G ++++ GP +F + SG GNNW
Sbjct: 71 KSLKARAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 37.5 bits (83), Expect = 0.006
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +2
Query: 419 VRKEAESCDCLQGFQLTHSL 478
+RKEAE CD +QGFQL HSL
Sbjct: 1 MRKEAEDCDAIQGFQLLHSL 20
>SB_49423| Best HMM Match : Dicty_CAD (HMM E-Value=6.4)
Length = 384
Score = 33.1 bits (72), Expect = 0.12
Identities = 21/64 (32%), Positives = 33/64 (51%)
Frame = -3
Query: 457 SLEAITRFRFLSNDV*N*IDELSTLRVVSLGPVVAGAGLSEDEVVRTEDLSERSRADRVH 278
S++A R R +S V I +L V++L PV+ G +++D V + RSR R H
Sbjct: 204 SVDATLRGRDISAGVYQEIRDLGGAGVIALKPVMRGPDINDDGSVCQKRRPNRSRCPRRH 263
Query: 277 GAGL 266
G+
Sbjct: 264 RCGI 267
>SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23)
Length = 3368
Score = 30.7 bits (66), Expect = 0.65
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -1
Query: 438 DSASFRTTSKTESTSSAPSV*CPLAQL 358
DSASFR +S + ++ SV CPL QL
Sbjct: 2663 DSASFRNSSNDKESADPSSVRCPLLQL 2689
>SB_23807| Best HMM Match : DUF885 (HMM E-Value=6.6e-16)
Length = 879
Score = 27.9 bits (59), Expect = 4.6
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 317 RPDNFVFRQSGAGNNWAKGHYTEGAELVDSVLDVVRK 427
RP+ + + G + W K H +G + DS+LD + K
Sbjct: 295 RPEYYSELEEGVNDKWTKNH--KGMNVSDSILDALVK 329
>SB_48387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 941
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = -3
Query: 451 EAITRFRFLSNDV*N*IDELSTLRVVSLGPVVAGAGLSEDEVVRTEDLSERSRADR 284
E T R S ++ ++ELS ++ + + A G S DE+ R D + + +R
Sbjct: 589 EEATTLRVQSQELRASLEELSQVKTKEINTLRAELGKSRDEIARKNDREKNALRER 644
>SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 27.5 bits (58), Expect = 6.1
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -2
Query: 218 IVVYIDALQLQVRVPM-VGTGGVDAVLVGDDLPEL 117
I VY DA++LQV P+ G+D + V D EL
Sbjct: 48 ITVYADAVELQVTYPLRAPLRGIDLITVYADAVEL 82
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,982,716
Number of Sequences: 59808
Number of extensions: 313991
Number of successful extensions: 949
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 934
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1001731762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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