Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0641
         (687 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q17AF3 Cluster: Putative uncharacterized protein; n=1; ...    71   2e-11
UniRef50_Q9VVN9 Cluster: CG7330-PA; n=3; Diptera|Rep: CG7330-PA ...    66   6e-10
UniRef50_A0TV72 Cluster: Putative uncharacterized protein; n=2; ...    35   2.1  
UniRef50_A2E5A3 Cluster: Putative uncharacterized protein; n=1; ...    34   2.8  
UniRef50_UPI0001554887 Cluster: PREDICTED: similar to Tumor necr...    34   3.7  
UniRef50_UPI0000DA30F4 Cluster: PREDICTED: hypothetical protein;...    33   6.5  
UniRef50_A3ZWK7 Cluster: Transcriptional regulator, AraC family ...    33   8.6  

>UniRef50_Q17AF3 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 192

 Score = 71.3 bits (167), Expect = 2e-11
 Identities = 45/99 (45%), Positives = 58/99 (58%), Gaps = 12/99 (12%)
 Frame = +3

Query: 237 FPFHHHAVRLTNFVKKLSYALSPATYRSRSRRELL-----LTD---PAEPFDVVEVEKYI 392
           FP    +VRL NF KKL+Y+++P TY+SRSRRE L     LTD        DV + E+ I
Sbjct: 44  FPVIILSVRLANFAKKLAYSVNPKTYQSRSRRETLAGAGELTDEEISRMAVDVAQAERKI 103

Query: 393 VGEFGAKACVFERVCAHYATRA-RTQPRP---QLDWPDV 497
           + EFG KAC+ E  C  +A R+ RT   P   Q DW D+
Sbjct: 104 LQEFGPKACIEEEPCRLHAVRSTRTTSAPGDYQPDWNDI 142



 Score = 42.3 bits (95), Expect = 0.011
 Identities = 17/33 (51%), Positives = 22/33 (66%)
 Frame = +2

Query: 530 KEYYLLSVFLGDIVGSPTLCHQLGKRMNCDTQQ 628
           K++YLLSVF+GD +     C QL KR+ CD  Q
Sbjct: 154 KQWYLLSVFIGDYIRDVQFCKQLSKRLACDRNQ 186



 Score = 32.7 bits (71), Expect = 8.6
 Identities = 14/19 (73%), Positives = 16/19 (84%)
 Frame = +1

Query: 199 QQTSFELPVQLIGFPFIIM 255
           Q+  FELPVQLIGFP II+
Sbjct: 31  QEPLFELPVQLIGFPVIIL 49


>UniRef50_Q9VVN9 Cluster: CG7330-PA; n=3; Diptera|Rep: CG7330-PA -
           Drosophila melanogaster (Fruit fly)
          Length = 193

 Score = 66.5 bits (155), Expect = 6e-10
 Identities = 36/75 (48%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
 Frame = +3

Query: 237 FPFHHHAVRLTNFVKKLSYALSPATYRSRSRRELLLTDPAEP--FDVVEVEKYIVGEFGA 410
           FP    +VRL+ F KKL+Y+LSP+TYRSR+RR     D A P   D    +K I+GEFG 
Sbjct: 47  FPVIVLSVRLSQFAKKLAYSLSPSTYRSRTRR-----DTAHPLALDAELAQKQILGEFGP 101

Query: 411 KACVFERVCAHYATR 455
           +AC+ E  C  +A+R
Sbjct: 102 QACILEEPCRVHASR 116



 Score = 38.3 bits (85), Expect = 0.17
 Identities = 16/29 (55%), Positives = 20/29 (68%)
 Frame = +2

Query: 530 KEYYLLSVFLGDIVGSPTLCHQLGKRMNC 616
           K++YLLS+F+GD V    LC  L KRM C
Sbjct: 153 KQWYLLSLFIGDAVRDVPLCKHLAKRMPC 181


>UniRef50_A0TV72 Cluster: Putative uncharacterized protein; n=2;
           Burkholderia cepacia complex|Rep: Putative
           uncharacterized protein - Burkholderia cenocepacia MC0-3
          Length = 1809

 Score = 34.7 bits (76), Expect = 2.1
 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = -1

Query: 498 KHLASQVEAAVAFAPWSHSARIH-VRTRKLWHRTRPLCISPLLRHRRARLGPLATTHGDS 322
           +H  +++   V  A     A++H V T    HRTRP    P +R   AR  P    HG++
Sbjct: 685 QHARAELREQVRAADVDRRAQVHAVATHAAPHRTRPRVAHPRVRQHAARFRPPRRIHGEA 744


>UniRef50_A2E5A3 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 863

 Score = 34.3 bits (75), Expect = 2.8
 Identities = 20/55 (36%), Positives = 29/55 (52%)
 Frame = -2

Query: 527 LDPESALLTENIWPVKLRPRLRSRPGRIVRAYTFEHASFGTELAHYVFLHFYDIE 363
           L+    +LTEN W V +   LRS P +I    T + A +  E A  VF++ + IE
Sbjct: 561 LNNNPEILTENSWNVLVEMCLRSDPSKIKEILTHKSAKYNNEEA-LVFMNSFGIE 614


>UniRef50_UPI0001554887 Cluster: PREDICTED: similar to Tumor
           necrosis factor receptor superfamily member 8 precursor
           (CD30L receptor) (Lymphocyte activation antigen CD30)
           (KI-1 antigen); n=1; Ornithorhynchus anatinus|Rep:
           PREDICTED: similar to Tumor necrosis factor receptor
           superfamily member 8 precursor (CD30L receptor)
           (Lymphocyte activation antigen CD30) (KI-1 antigen) -
           Ornithorhynchus anatinus
          Length = 751

 Score = 33.9 bits (74), Expect = 3.7
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = +2

Query: 365 RCRRSGEIHSGRVRCQSLRVRTCMRALCDQGANATAAST*LARCFQSIKRSPD 523
           RC   GEI +G +  +SLR  + +   CD+G     +ST   R  ++  R  D
Sbjct: 651 RCPHPGEILNGHIEIESLRAGSVIHFTCDKGHKLFGSSTSTCRTVKNESRWSD 703


>UniRef50_UPI0000DA30F4 Cluster: PREDICTED: hypothetical protein;
           n=1; Rattus norvegicus|Rep: PREDICTED: hypothetical
           protein - Rattus norvegicus
          Length = 295

 Score = 33.1 bits (72), Expect = 6.5
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = +2

Query: 317 VSESP*VVANGPSRALRCRRSGEIHSGRVRCQSLRVRTCMRA 442
           ++  P + ANG +   R R +G  HS RV  Q  + R+C RA
Sbjct: 98  LAHGPQLRANGNAHVGRLRATGGPHSARVTAQKKKTRSCARA 139


>UniRef50_A3ZWK7 Cluster: Transcriptional regulator, AraC family
           protein; n=1; Blastopirellula marina DSM 3645|Rep:
           Transcriptional regulator, AraC family protein -
           Blastopirellula marina DSM 3645
          Length = 301

 Score = 32.7 bits (71), Expect = 8.6
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = -2

Query: 506 LTENIWPVKLRPRLRSRPGRIVRAYTFEHASFGTELA 396
           LTEN  P  L PR R RP  I R   + HA+F  +++
Sbjct: 179 LTENQAPAPLGPRDRLRPASIQRTLEYLHANFSQDVS 215


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 648,946,439
Number of Sequences: 1657284
Number of extensions: 12956023
Number of successful extensions: 29966
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 29200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29960
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53719013270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)