Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0641
         (687 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   2.3  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   4.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.2  

>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +2

Query: 494 CFQSIKRSPDQAKEYYLLSVFLGDIVGSPTL 586
           C  SI    +Q + Y   SVFL DI+   TL
Sbjct: 56  CIWSIFNKWNQFRSYSNFSVFLFDIITIVTL 86


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +1

Query: 265 SPTLLRNYPML*AQRHTGLGVAVSCC*RTQPSPS 366
           +P    +  +L  QRH+   VA+ C  +  PSPS
Sbjct: 230 APAFSTDIKVLGYQRHSKQNVALLCPAQGFPSPS 263


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 5/9 (55%), Positives = 7/9 (77%)
 Frame = +2

Query: 158 CHFCCSNVY 184
           CH CCS ++
Sbjct: 650 CHVCCSTIH 658


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,362
Number of Sequences: 336
Number of extensions: 3198
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)