Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0641
         (687 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK093718-1|BAC04219.1|  190|Homo sapiens protein ( Homo sapiens ...    31   3.8  
AB058756-1|BAB47482.1|  708|Homo sapiens KIAA1853 protein protein.     30   6.7  
AY130006-1|AAN05090.1|   90|Homo sapiens MU-MB-2.76 protein.           30   8.9  

>AK093718-1|BAC04219.1|  190|Homo sapiens protein ( Homo sapiens
           cDNA FLJ36399 fis, clone THYMU2009658, weakly similar to
           SERYL-TRNA SYNTHETASE (EC 6.1.1.11). ).
          Length = 190

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
 Frame = -1

Query: 669 YLNAKHHDHVYI---PNCWVSQFIRLPS*WHNVGEPTMSPRNTLSK*YS 532
           +  + HH H+ +   P+CW  +   LP  W  V    MSP + L   Y+
Sbjct: 49  HTGSSHHKHLLLWSSPSCWGPRLACLPVVWKQVFMARMSPTSVLYSPYT 97


>AB058756-1|BAB47482.1|  708|Homo sapiens KIAA1853 protein protein.
          Length = 708

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 25/83 (30%), Positives = 31/83 (37%), Gaps = 1/83 (1%)
 Frame = +1

Query: 352 QPSPSMS*KWRNT*-WASSVPKLACSNVYARTMRPGRERNRGLNLTGQMFSVNKALSGSS 528
           +PSPS S    +T  W SS    + S  Y+R+    R R R    T    S      GS 
Sbjct: 618 RPSPSSSGSLSSTSSWYSSSSSRSASRSYSRSWSRSRSRRRSRTRTSSSSSSRSPSPGSR 677

Query: 529 QRILFAERVPRRHRGLTHIMPSA 597
            R     R   R R  +    SA
Sbjct: 678 SRSRSRSRSRSRSRSQSRSYSSA 700


>AY130006-1|AAN05090.1|   90|Homo sapiens MU-MB-2.76 protein.
          Length = 90

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 25/82 (30%), Positives = 30/82 (36%), Gaps = 1/82 (1%)
 Frame = +1

Query: 355 PSPSMS*KWRNT*-WASSVPKLACSNVYARTMRPGRERNRGLNLTGQMFSVNKALSGSSQ 531
           PSPS S    +T  W SS    + S  Y+R+    R R R    T    S      GS  
Sbjct: 1   PSPSSSGSLSSTSSWYSSSSSRSASRSYSRSRSRSRSRRRSRTRTSSSSSSRSPSPGSRS 60

Query: 532 RILFAERVPRRHRGLTHIMPSA 597
           R     R   R R  +    SA
Sbjct: 61  RSRSRSRSRSRSRSQSRSYSSA 82


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,725,217
Number of Sequences: 237096
Number of extensions: 1989547
Number of successful extensions: 8579
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8579
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)