Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0641
         (687 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113426-1|AAM29431.1|  193|Drosophila melanogaster RE22290p pro...    66   3e-11
AY071344-1|AAL48966.1|  193|Drosophila melanogaster RE37935p pro...    66   3e-11
AE014296-3006|AAF49272.1|  193|Drosophila melanogaster CG7330-PA...    66   3e-11

>AY113426-1|AAM29431.1|  193|Drosophila melanogaster RE22290p
           protein.
          Length = 193

 Score = 66.5 bits (155), Expect = 3e-11
 Identities = 36/75 (48%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
 Frame = +3

Query: 237 FPFHHHAVRLTNFVKKLSYALSPATYRSRSRRELLLTDPAEP--FDVVEVEKYIVGEFGA 410
           FP    +VRL+ F KKL+Y+LSP+TYRSR+RR     D A P   D    +K I+GEFG 
Sbjct: 47  FPVIVLSVRLSQFAKKLAYSLSPSTYRSRTRR-----DTAHPLALDAELAQKQILGEFGP 101

Query: 411 KACVFERVCAHYATR 455
           +AC+ E  C  +A+R
Sbjct: 102 QACILEEPCRVHASR 116



 Score = 38.3 bits (85), Expect = 0.010
 Identities = 16/29 (55%), Positives = 20/29 (68%)
 Frame = +2

Query: 530 KEYYLLSVFLGDIVGSPTLCHQLGKRMNC 616
           K++YLLS+F+GD V    LC  L KRM C
Sbjct: 153 KQWYLLSLFIGDAVRDVPLCKHLAKRMPC 181



 Score = 31.5 bits (68), Expect = 1.1
 Identities = 14/25 (56%), Positives = 18/25 (72%), Gaps = 2/25 (8%)
 Frame = +1

Query: 187 EGTGQQTS--FELPVQLIGFPFIIM 255
           EG  Q +   FELPVQL+GFP I++
Sbjct: 28  EGLAQNSDPLFELPVQLVGFPVIVL 52


>AY071344-1|AAL48966.1|  193|Drosophila melanogaster RE37935p
           protein.
          Length = 193

 Score = 66.5 bits (155), Expect = 3e-11
 Identities = 36/75 (48%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
 Frame = +3

Query: 237 FPFHHHAVRLTNFVKKLSYALSPATYRSRSRRELLLTDPAEP--FDVVEVEKYIVGEFGA 410
           FP    +VRL+ F KKL+Y+LSP+TYRSR+RR     D A P   D    +K I+GEFG 
Sbjct: 47  FPVIVLSVRLSQFAKKLAYSLSPSTYRSRTRR-----DTAHPLALDAELAQKQILGEFGP 101

Query: 411 KACVFERVCAHYATR 455
           +AC+ E  C  +A+R
Sbjct: 102 QACILEEPCRVHASR 116



 Score = 38.3 bits (85), Expect = 0.010
 Identities = 16/29 (55%), Positives = 20/29 (68%)
 Frame = +2

Query: 530 KEYYLLSVFLGDIVGSPTLCHQLGKRMNC 616
           K++YLLS+F+GD V    LC  L KRM C
Sbjct: 153 KQWYLLSLFIGDAVRDVPLCKHLAKRMPC 181



 Score = 31.5 bits (68), Expect = 1.1
 Identities = 14/25 (56%), Positives = 18/25 (72%), Gaps = 2/25 (8%)
 Frame = +1

Query: 187 EGTGQQTS--FELPVQLIGFPFIIM 255
           EG  Q +   FELPVQL+GFP I++
Sbjct: 28  EGLAQNSDPLFELPVQLVGFPVIVL 52


>AE014296-3006|AAF49272.1|  193|Drosophila melanogaster CG7330-PA
           protein.
          Length = 193

 Score = 66.5 bits (155), Expect = 3e-11
 Identities = 36/75 (48%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
 Frame = +3

Query: 237 FPFHHHAVRLTNFVKKLSYALSPATYRSRSRRELLLTDPAEP--FDVVEVEKYIVGEFGA 410
           FP    +VRL+ F KKL+Y+LSP+TYRSR+RR     D A P   D    +K I+GEFG 
Sbjct: 47  FPVIVLSVRLSQFAKKLAYSLSPSTYRSRTRR-----DTAHPLALDAELAQKQILGEFGP 101

Query: 411 KACVFERVCAHYATR 455
           +AC+ E  C  +A+R
Sbjct: 102 QACILEEPCRVHASR 116



 Score = 38.3 bits (85), Expect = 0.010
 Identities = 16/29 (55%), Positives = 20/29 (68%)
 Frame = +2

Query: 530 KEYYLLSVFLGDIVGSPTLCHQLGKRMNC 616
           K++YLLS+F+GD V    LC  L KRM C
Sbjct: 153 KQWYLLSLFIGDAVRDVPLCKHLAKRMPC 181



 Score = 31.5 bits (68), Expect = 1.1
 Identities = 14/25 (56%), Positives = 18/25 (72%), Gaps = 2/25 (8%)
 Frame = +1

Query: 187 EGTGQQTS--FELPVQLIGFPFIIM 255
           EG  Q +   FELPVQL+GFP I++
Sbjct: 28  EGLAQNSDPLFELPVQLVGFPVIVL 52


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,205,815
Number of Sequences: 53049
Number of extensions: 610992
Number of successful extensions: 1265
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1262
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)