Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0641
         (687 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z12017-8|CAA78050.3|  371|Caenorhabditis elegans Hypothetical pr...    28   5.4  
U61950-4|AAC24287.2|  303|Caenorhabditis elegans Hypothetical pr...    28   7.2  

>Z12017-8|CAA78050.3|  371|Caenorhabditis elegans Hypothetical
           protein R08D7.4 protein.
          Length = 371

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +2

Query: 134 KCVMSGVYCHFCCSNVYWKELVSRHRSNYQY 226
           +C+    Y    C+NV+  E+V+ H   Y++
Sbjct: 67  QCIKDSEYAENLCNNVFNNEIVTSHEIRYKF 97


>U61950-4|AAC24287.2|  303|Caenorhabditis elegans Hypothetical
           protein C45E5.1 protein.
          Length = 303

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
 Frame = -2

Query: 611 SFAYQADGIMWVSPRCLLGTRSANNILWLDPE-SALLTEN 495
           +F + ADG++W     + G     N L  DPE S  +T N
Sbjct: 17  TFVFDADGVLWTGDIPIPGAAEWINTLLDDPEKSVFITTN 56


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,921,444
Number of Sequences: 27780
Number of extensions: 305735
Number of successful extensions: 649
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 649
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)