BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0640 (755 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 152 5e-38 SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 149 4e-37 SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 136 2e-33 SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 136 2e-33 SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 130 2e-31 SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 75 1e-14 SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 71 1e-13 SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 55 1e-08 SPBC215.10 |||haloacid dehalogenase-like hydrolase|Schizosacchar... 29 0.54 SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 29 0.72 SPAC4G9.17c |mrps5||mitochondrial ribosomal protein subunit S5|S... 28 1.7 SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 26 5.0 SPBC660.16 |||phosphogluconate dehydrogenase, decarboxylating |S... 26 6.7 SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces p... 26 6.7 SPCC188.09c |||glycoprotein |Schizosaccharomyces pombe|chr 3|||M... 25 8.8 >SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces pombe|chr 3|||Manual Length = 647 Score = 152 bits (369), Expect = 5e-38 Identities = 72/84 (85%), Positives = 79/84 (94%) Frame = +2 Query: 2 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDL 181 +AV+TVPAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGLD+ GE NVLIFDL Sbjct: 139 DAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQGESNVLIFDL 198 Query: 182 GGGTFDVSILTIEDGIFEVKSTAG 253 GGGTFDVS+LTIE+GIFEVK+TAG Sbjct: 199 GGGTFDVSLLTIEEGIFEVKATAG 222 Score = 150 bits (363), Expect = 2e-37 Identities = 72/84 (85%), Positives = 77/84 (91%) Frame = +1 Query: 256 THLGGEVFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEID 435 THLGGE FD+R+VNHF+QEFKRK KKD+ N RA+RRLRTACERAKRTLSSS QASIEID Sbjct: 224 THLGGEDFDSRLVNHFIQEFKRKNKKDITGNARAVRRLRTACERAKRTLSSSAQASIEID 283 Query: 436 SLFEGIDFYTSITRARFEELNADL 507 SLFEGIDFYTSITRARFEEL ADL Sbjct: 284 SLFEGIDFYTSITRARFEELCADL 307 Score = 107 bits (258), Expect = 1e-24 Identities = 52/82 (63%), Positives = 62/82 (75%) Frame = +3 Query: 510 RSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXX 689 R TMEPVE+ LRD+K+DKA +++IVLVGGSTRIP+VQKL+ DFFNGKE KSINPDE Sbjct: 309 RKTMEPVERVLRDSKVDKASVNEIVLVGGSTRIPRVQKLVSDFFNGKEPCKSINPDEAVA 368 Query: 690 XXXXXXXXILHGDKSEEVQDLL 755 +L GD SE+ QDLL Sbjct: 369 YGAAVQAAVLTGDTSEKTQDLL 390 >SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces pombe|chr 1|||Manual Length = 644 Score = 149 bits (361), Expect = 4e-37 Identities = 71/84 (84%), Positives = 78/84 (92%) Frame = +2 Query: 2 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDL 181 +AV+TVPAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGLD+ E NVLIFDL Sbjct: 139 DAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQHETNVLIFDL 198 Query: 182 GGGTFDVSILTIEDGIFEVKSTAG 253 GGGTFDVS+LTIE+GIFEVK+TAG Sbjct: 199 GGGTFDVSLLTIEEGIFEVKATAG 222 Score = 147 bits (357), Expect = 1e-36 Identities = 71/84 (84%), Positives = 76/84 (90%) Frame = +1 Query: 256 THLGGEVFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEID 435 THLGGE FD+R+VNHF QEFKRK KKD+ N RA+RRLRTACERAKRTLSSS QASIEID Sbjct: 224 THLGGEDFDSRLVNHFAQEFKRKNKKDITGNARAVRRLRTACERAKRTLSSSAQASIEID 283 Query: 436 SLFEGIDFYTSITRARFEELNADL 507 SL+EGIDFYTSITRARFEEL ADL Sbjct: 284 SLYEGIDFYTSITRARFEELCADL 307 Score = 107 bits (258), Expect = 1e-24 Identities = 52/82 (63%), Positives = 63/82 (76%) Frame = +3 Query: 510 RSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXX 689 R+TMEPVEK LRD+K+DK+ +++IVLVGGSTRIP++QKL+ DFFNGKE KSINPDE Sbjct: 309 RNTMEPVEKVLRDSKIDKSSVNEIVLVGGSTRIPRIQKLVSDFFNGKEPCKSINPDEAVA 368 Query: 690 XXXXXXXXILHGDKSEEVQDLL 755 IL GD SE+ QDLL Sbjct: 369 YGAAVQAAILVGDTSEKTQDLL 390 >SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||Manual Length = 663 Score = 136 bits (330), Expect = 2e-33 Identities = 61/84 (72%), Positives = 80/84 (95%) Frame = +2 Query: 2 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDL 181 +AV+TVPAYFND+QRQATKDAGTI+GLNV+RI+NEPTAAAIAYGLDK T E++++++DL Sbjct: 172 HAVVTVPAYFNDAQRQATKDAGTIAGLNVIRIVNEPTAAAIAYGLDKTDT-EKHIVVYDL 230 Query: 182 GGGTFDVSILTIEDGIFEVKSTAG 253 GGGTFDVS+L+I++G+FEV +T+G Sbjct: 231 GGGTFDVSLLSIDNGVFEVLATSG 254 Score = 89.4 bits (212), Expect = 5e-19 Identities = 40/84 (47%), Positives = 58/84 (69%) Frame = +1 Query: 256 THLGGEVFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEID 435 THLGGE FDNR++N+ + + RK D+ + +A+ +L+ E+AKRTLSS IEI+ Sbjct: 256 THLGGEDFDNRVINYLARTYNRKNNVDVTKDLKAMGKLKREVEKAKRTLSSQKSVRIEIE 315 Query: 436 SLFEGIDFYTSITRARFEELNADL 507 S F G DF +++RA+FEE+N DL Sbjct: 316 SFFNGQDFSETLSRAKFEEINMDL 339 Score = 79.0 bits (186), Expect = 7e-16 Identities = 37/77 (48%), Positives = 54/77 (70%) Frame = +3 Query: 510 RSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXX 689 + T++PVE+ L+D+ + K++I DIVLVGGSTRIPKVQ+LL+ FF GK+ +K INPDE Sbjct: 341 KKTLKPVEQVLKDSNLKKSEIDDIVLVGGSTRIPKVQELLESFF-GKKASKGINPDEAVA 399 Query: 690 XXXXXXXXILHGDKSEE 740 +L G++ + Sbjct: 400 YGAAVQAGVLSGEEGSD 416 >SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces pombe|chr 2|||Manual Length = 613 Score = 136 bits (330), Expect = 2e-33 Identities = 66/83 (79%), Positives = 73/83 (87%) Frame = +2 Query: 5 AVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLG 184 AVITVPAYF+DSQR ATKDAG I+GLNVLRIINEPTAAAIAYGLD K +NVLIFDLG Sbjct: 144 AVITVPAYFSDSQRAATKDAGAIAGLNVLRIINEPTAAAIAYGLDAKSDKPKNVLIFDLG 203 Query: 185 GGTFDVSILTIEDGIFEVKSTAG 253 GGTFDVS+L I+ G+FEV +TAG Sbjct: 204 GGTFDVSLLKIQGGVFEVLATAG 226 Score = 124 bits (298), Expect = 2e-29 Identities = 57/82 (69%), Positives = 69/82 (84%) Frame = +1 Query: 256 THLGGEVFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEID 435 THLGGE FDN +V HF+QEFKRK K D++ + RALRRLR+ACERAKR LSS TQ ++E+D Sbjct: 228 THLGGEDFDNALVEHFIQEFKRKQKIDISDDPRALRRLRSACERAKRALSSVTQTTVEVD 287 Query: 436 SLFEGIDFYTSITRARFEELNA 501 SL GIDF +SITRARFE++NA Sbjct: 288 SLSNGIDFSSSITRARFEDINA 309 Score = 93.5 bits (222), Expect = 3e-20 Identities = 45/83 (54%), Positives = 61/83 (73%), Gaps = 1/83 (1%) Frame = +3 Query: 510 RSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXX 689 ++T++PV K L+D+K+ KA +HDIVLVGGSTRIPKVQ+L+ DFF+G+ LNKSINPDE Sbjct: 313 KATIDPVAKVLKDSKVPKADVHDIVLVGGSTRIPKVQRLVSDFFDGRALNKSINPDEAVA 372 Query: 690 XXXXXXXXIL-HGDKSEEVQDLL 755 +L + S++ QDLL Sbjct: 373 YGAAVQAAVLTNKADSDKTQDLL 395 >SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces pombe|chr 1|||Manual Length = 674 Score = 130 bits (315), Expect = 2e-31 Identities = 61/84 (72%), Positives = 73/84 (86%) Frame = +2 Query: 2 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDL 181 NAV+TVPAYFNDSQRQATK AG I+GLNVLR++NEPTAAA+AYGLDKK + V +FDL Sbjct: 185 NAVVTVPAYFNDSQRQATKAAGAIAGLNVLRVVNEPTAAALAYGLDKK--NDAIVAVFDL 242 Query: 182 GGGTFDVSILTIEDGIFEVKSTAG 253 GGGTFD+SIL + +G+FEV+ST G Sbjct: 243 GGGTFDISILELNNGVFEVRSTNG 266 Score = 58.8 bits (136), Expect = 8e-10 Identities = 26/73 (35%), Positives = 47/73 (64%) Frame = +3 Query: 507 VRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXX 686 VR T++P +++L+DA + ++I++++LVGG TR+P+V + ++ F +E KS+NPDE Sbjct: 356 VRRTIDPCKRALKDANLQTSEINEVILVGGMTRMPRVVETVKSIFK-REPAKSVNPDEAV 414 Query: 687 XXXXXXXXXILHG 725 +L G Sbjct: 415 AIGAAIQGGVLSG 427 Score = 56.8 bits (131), Expect = 3e-09 Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 4/84 (4%) Frame = +1 Query: 256 THLGGEVFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEID 435 THLGGE FD +V H V+ FK+ DL+ ++ A++R+R A E+AK LSS ++ I + Sbjct: 268 THLGGEDFDVALVRHIVETFKKNEGLDLSKDRLAVQRIREAAEKAKCELSSLSKTDISLP 327 Query: 436 SLFEGI----DFYTSITRARFEEL 495 + I+RA+FE+L Sbjct: 328 FITADATGPKHINMEISRAQFEKL 351 >SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pombe|chr 1|||Manual Length = 566 Score = 74.9 bits (176), Expect = 1e-14 Identities = 36/77 (46%), Positives = 51/77 (66%) Frame = +1 Query: 259 HLGGEVFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDS 438 +LGGE + +VN F +EF++K D N R+L +LR CE KR LS+ T AS +DS Sbjct: 251 NLGGEQLTDVLVNFFAKEFEKKNGIDPRKNARSLAKLRAQCEITKRVLSNGTTASAAVDS 310 Query: 439 LFEGIDFYTSITRARFE 489 L +GIDF++SI R R++ Sbjct: 311 LADGIDFHSSINRLRYD 327 Score = 54.4 bits (125), Expect = 2e-08 Identities = 23/77 (29%), Positives = 49/77 (63%) Frame = +2 Query: 8 VITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGG 187 V++VP YF D+QR+A + A +GL VL++I++P A +A ++ ++ V++ + G Sbjct: 167 VMSVPVYFTDAQRKALESAANEAGLPVLQLIHDPAAVILALMYSEEVLIDKTVVVANFGA 226 Query: 188 GTFDVSILTIEDGIFEV 238 +VS+++++ G+ + Sbjct: 227 TRSEVSVVSVKGGLMTI 243 Score = 31.5 bits (68), Expect = 0.13 Identities = 12/46 (26%), Positives = 27/46 (58%) Frame = +3 Query: 528 VEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKS 665 V +++ A M+ I +++L GG++ PK+ L++ F + + +S Sbjct: 341 VTEAVEKANMEPFDISEVILAGGASNTPKLTSLMESIFPEQTIIRS 386 >SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Schizosaccharomyces pombe|chr 1|||Manual Length = 720 Score = 71.3 bits (167), Expect = 1e-13 Identities = 37/86 (43%), Positives = 52/86 (60%), Gaps = 4/86 (4%) Frame = +2 Query: 2 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGE----RNVL 169 + VI++PA+F D QR+A +A I+GLN LR++N+ AAA+ YG+ K E R V Sbjct: 143 DVVISIPAWFTDIQRRALLEAANIAGLNPLRLMNDNAAAALTYGITKTDLPEPESPRRVA 202 Query: 170 IFDLGGGTFDVSILTIEDGIFEVKST 247 I D G + VSI+ G F +KST Sbjct: 203 IVDFGHSNYSVSIVEFSRGQFHIKST 228 Score = 69.3 bits (162), Expect = 5e-13 Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 4/94 (4%) Frame = +1 Query: 226 YLRGEIHRRRT----HLGGEVFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAK 393 + RG+ H + T +LG D ++++F EFK KYK D+ +N +A RL TA ER K Sbjct: 218 FSRGQFHIKSTVCDRNLGSRNMDKALIDYFAAEFKEKYKIDVLSNPKATFRLATAVERLK 277 Query: 394 RTLSSSTQASIEIDSLFEGIDFYTSITRARFEEL 495 + LS++ A + ++ + ID + I R+ FEEL Sbjct: 278 KVLSANANAPLNVEMIMNDIDASSFIKRSDFEEL 311 Score = 46.0 bits (104), Expect = 6e-06 Identities = 21/52 (40%), Positives = 37/52 (71%) Frame = +3 Query: 525 PVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 680 P+EK+L A + K ++ I +VGG TR+P V++++ ++F GK L+ ++N DE Sbjct: 322 PIEKALELAGIKKEDLYSIEMVGGCTRVPIVKEVIANYF-GKGLSFTLNQDE 372 >SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 848 Score = 55.2 bits (127), Expect = 1e-08 Identities = 29/82 (35%), Positives = 44/82 (53%) Frame = +1 Query: 262 LGGEVFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSL 441 L G + +++ F +K+ DL+ N RAL RL R K LS++++A I+ L Sbjct: 262 LSGNEINRKLIGFMKNSFYQKHGIDLSHNHRALARLEKEALRVKHILSANSEAIASIEEL 321 Query: 442 FEGIDFYTSITRARFEELNADL 507 +GIDF ITR+ E L D+ Sbjct: 322 ADGIDFRLKITRSVLESLCKDM 343 Score = 53.2 bits (122), Expect = 4e-08 Identities = 20/56 (35%), Positives = 40/56 (71%) Frame = +3 Query: 513 STMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 680 + +EP+ K+L+ A + ++I+ I+L GG++RIP +Q L D+ + +++K++N DE Sbjct: 346 AAVEPINKALKKANLTFSEINSIILFGGASRIPFIQSTLADYVSSDKISKNVNADE 401 Score = 46.0 bits (104), Expect = 6e-06 Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 1/72 (1%) Frame = +2 Query: 8 VITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK-GTGERNVLIFDLG 184 V+TVP +FN+ QR +A I +VL +I++ A AI Y L + T +I+D G Sbjct: 164 VLTVPPHFNELQRSILLEAARILNKHVLALIDDNVAVAIEYSLSRSFSTDPTYNIIYDSG 223 Query: 185 GGTFDVSILTIE 220 G+ ++++ + Sbjct: 224 SGSTSATVISFD 235 >SPBC215.10 |||haloacid dehalogenase-like hydrolase|Schizosaccharomyces pombe|chr 2|||Manual Length = 302 Score = 29.5 bits (63), Expect = 0.54 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%) Frame = +2 Query: 323 NTKRTSLPTRELLGVCVLHVRGQR-GPCHRPHKRALR*ILSLR 448 N K+ LP E + + + V G GP H+PH R LR + LR Sbjct: 9 NQKKNVLPKPEDIQLIICDVDGTLLGPDHKPHPRNLRALKYLR 51 >SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosaccharomyces pombe|chr 1|||Manual Length = 1628 Score = 29.1 bits (62), Expect = 0.72 Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 1/80 (1%) Frame = +1 Query: 289 MVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTS 468 +++ F EFK++ K D + L+ L + C R R SS SI ++ + + Sbjct: 711 ILSSFSNEFKKRLKSDGTSIAHWLQGLASFCGRVFRRYSSLDCTSI-VEYVIKQFKVNQM 769 Query: 469 ITRARFEELNADLSGL-PWS 525 +EL + ++GL PW+ Sbjct: 770 FDLVILKELLSQMTGLQPWT 789 >SPAC4G9.17c |mrps5||mitochondrial ribosomal protein subunit S5|Schizosaccharomyces pombe|chr 1|||Manual Length = 387 Score = 27.9 bits (59), Expect = 1.7 Identities = 15/44 (34%), Positives = 22/44 (50%) Frame = +1 Query: 421 SIEIDSLFEGIDFYTSITRARFEELNADLSGLPWSQWRSLSVMP 552 + EI S F DF + E +D+SG+P S R+L +P Sbjct: 186 TFEISSKFSPFDFGDAGKSTSDAEFLSDISGIPKSDLRALMFVP 229 >SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 |Schizosaccharomyces pombe|chr 1|||Manual Length = 932 Score = 26.2 bits (55), Expect = 5.0 Identities = 9/19 (47%), Positives = 14/19 (73%) Frame = -3 Query: 576 RGFEPYPSWHHGETSPLAP 520 + +P P+ HG+TSPL+P Sbjct: 420 KAIKPMPTSIHGQTSPLSP 438 >SPBC660.16 |||phosphogluconate dehydrogenase, decarboxylating |Schizosaccharomyces pombe|chr 2|||Manual Length = 492 Score = 25.8 bits (54), Expect = 6.7 Identities = 14/53 (26%), Positives = 25/53 (47%) Frame = +2 Query: 131 GLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGAPTWEVRSLTIA 289 G + K TG++ LI DL + I++ G ++ A W++ + IA Sbjct: 309 GPNTKFTGDKKQLIDDLEDALYASKIISYAQGFMLMREAAKEYGWKLNNAGIA 361 >SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces pombe|chr 1|||Manual Length = 2280 Score = 25.8 bits (54), Expect = 6.7 Identities = 16/44 (36%), Positives = 18/44 (40%) Frame = +2 Query: 134 LDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGAPTW 265 LDK G+ I GG T SIL +GI VK W Sbjct: 48 LDKAPAGKVKDYIASHGGHTVITSILIANNGIAAVKEIRSIRKW 91 >SPCC188.09c |||glycoprotein |Schizosaccharomyces pombe|chr 3|||Manual Length = 609 Score = 25.4 bits (53), Expect = 8.8 Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 4/62 (6%) Frame = +2 Query: 143 KGTGERNVLIFDLGGGTF-DVSILTIEDG---IFEVKSTAGAPTWEVRSLTIAWSTTLSR 310 +GT + + + GT +T+ DG + +++ TAG T + S + ++TTL+ Sbjct: 71 RGTTNHSTIYTTINSGTVASTYTVTLADGDVVVKDIEPTAGTVTTTITSGSHEFTTTLAE 130 Query: 311 SS 316 +S Sbjct: 131 AS 132 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 3,270,652 Number of Sequences: 5004 Number of extensions: 68728 Number of successful extensions: 290 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 252 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 286 length of database: 2,362,478 effective HSP length: 71 effective length of database: 2,007,194 effective search space used: 361294920 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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