Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0640
(755 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 152 5e-38
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 149 4e-37
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 136 2e-33
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 136 2e-33
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 130 2e-31
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 75 1e-14
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 71 1e-13
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 55 1e-08
SPBC215.10 |||haloacid dehalogenase-like hydrolase|Schizosacchar... 29 0.54
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 29 0.72
SPAC4G9.17c |mrps5||mitochondrial ribosomal protein subunit S5|S... 28 1.7
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 26 5.0
SPBC660.16 |||phosphogluconate dehydrogenase, decarboxylating |S... 26 6.7
SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces p... 26 6.7
SPCC188.09c |||glycoprotein |Schizosaccharomyces pombe|chr 3|||M... 25 8.8
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 152 bits (369), Expect = 5e-38
Identities = 72/84 (85%), Positives = 79/84 (94%)
Frame = +2
Query: 2 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDL 181
+AV+TVPAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGLD+ GE NVLIFDL
Sbjct: 139 DAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQGESNVLIFDL 198
Query: 182 GGGTFDVSILTIEDGIFEVKSTAG 253
GGGTFDVS+LTIE+GIFEVK+TAG
Sbjct: 199 GGGTFDVSLLTIEEGIFEVKATAG 222
Score = 150 bits (363), Expect = 2e-37
Identities = 72/84 (85%), Positives = 77/84 (91%)
Frame = +1
Query: 256 THLGGEVFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEID 435
THLGGE FD+R+VNHF+QEFKRK KKD+ N RA+RRLRTACERAKRTLSSS QASIEID
Sbjct: 224 THLGGEDFDSRLVNHFIQEFKRKNKKDITGNARAVRRLRTACERAKRTLSSSAQASIEID 283
Query: 436 SLFEGIDFYTSITRARFEELNADL 507
SLFEGIDFYTSITRARFEEL ADL
Sbjct: 284 SLFEGIDFYTSITRARFEELCADL 307
Score = 107 bits (258), Expect = 1e-24
Identities = 52/82 (63%), Positives = 62/82 (75%)
Frame = +3
Query: 510 RSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXX 689
R TMEPVE+ LRD+K+DKA +++IVLVGGSTRIP+VQKL+ DFFNGKE KSINPDE
Sbjct: 309 RKTMEPVERVLRDSKVDKASVNEIVLVGGSTRIPRVQKLVSDFFNGKEPCKSINPDEAVA 368
Query: 690 XXXXXXXXILHGDKSEEVQDLL 755
+L GD SE+ QDLL
Sbjct: 369 YGAAVQAAVLTGDTSEKTQDLL 390
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 149 bits (361), Expect = 4e-37
Identities = 71/84 (84%), Positives = 78/84 (92%)
Frame = +2
Query: 2 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDL 181
+AV+TVPAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGLD+ E NVLIFDL
Sbjct: 139 DAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQHETNVLIFDL 198
Query: 182 GGGTFDVSILTIEDGIFEVKSTAG 253
GGGTFDVS+LTIE+GIFEVK+TAG
Sbjct: 199 GGGTFDVSLLTIEEGIFEVKATAG 222
Score = 147 bits (357), Expect = 1e-36
Identities = 71/84 (84%), Positives = 76/84 (90%)
Frame = +1
Query: 256 THLGGEVFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEID 435
THLGGE FD+R+VNHF QEFKRK KKD+ N RA+RRLRTACERAKRTLSSS QASIEID
Sbjct: 224 THLGGEDFDSRLVNHFAQEFKRKNKKDITGNARAVRRLRTACERAKRTLSSSAQASIEID 283
Query: 436 SLFEGIDFYTSITRARFEELNADL 507
SL+EGIDFYTSITRARFEEL ADL
Sbjct: 284 SLYEGIDFYTSITRARFEELCADL 307
Score = 107 bits (258), Expect = 1e-24
Identities = 52/82 (63%), Positives = 63/82 (76%)
Frame = +3
Query: 510 RSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXX 689
R+TMEPVEK LRD+K+DK+ +++IVLVGGSTRIP++QKL+ DFFNGKE KSINPDE
Sbjct: 309 RNTMEPVEKVLRDSKIDKSSVNEIVLVGGSTRIPRIQKLVSDFFNGKEPCKSINPDEAVA 368
Query: 690 XXXXXXXXILHGDKSEEVQDLL 755
IL GD SE+ QDLL
Sbjct: 369 YGAAVQAAILVGDTSEKTQDLL 390
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 136 bits (330), Expect = 2e-33
Identities = 61/84 (72%), Positives = 80/84 (95%)
Frame = +2
Query: 2 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDL 181
+AV+TVPAYFND+QRQATKDAGTI+GLNV+RI+NEPTAAAIAYGLDK T E++++++DL
Sbjct: 172 HAVVTVPAYFNDAQRQATKDAGTIAGLNVIRIVNEPTAAAIAYGLDKTDT-EKHIVVYDL 230
Query: 182 GGGTFDVSILTIEDGIFEVKSTAG 253
GGGTFDVS+L+I++G+FEV +T+G
Sbjct: 231 GGGTFDVSLLSIDNGVFEVLATSG 254
Score = 89.4 bits (212), Expect = 5e-19
Identities = 40/84 (47%), Positives = 58/84 (69%)
Frame = +1
Query: 256 THLGGEVFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEID 435
THLGGE FDNR++N+ + + RK D+ + +A+ +L+ E+AKRTLSS IEI+
Sbjct: 256 THLGGEDFDNRVINYLARTYNRKNNVDVTKDLKAMGKLKREVEKAKRTLSSQKSVRIEIE 315
Query: 436 SLFEGIDFYTSITRARFEELNADL 507
S F G DF +++RA+FEE+N DL
Sbjct: 316 SFFNGQDFSETLSRAKFEEINMDL 339
Score = 79.0 bits (186), Expect = 7e-16
Identities = 37/77 (48%), Positives = 54/77 (70%)
Frame = +3
Query: 510 RSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXX 689
+ T++PVE+ L+D+ + K++I DIVLVGGSTRIPKVQ+LL+ FF GK+ +K INPDE
Sbjct: 341 KKTLKPVEQVLKDSNLKKSEIDDIVLVGGSTRIPKVQELLESFF-GKKASKGINPDEAVA 399
Query: 690 XXXXXXXXILHGDKSEE 740
+L G++ +
Sbjct: 400 YGAAVQAGVLSGEEGSD 416
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 136 bits (330), Expect = 2e-33
Identities = 66/83 (79%), Positives = 73/83 (87%)
Frame = +2
Query: 5 AVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLG 184
AVITVPAYF+DSQR ATKDAG I+GLNVLRIINEPTAAAIAYGLD K +NVLIFDLG
Sbjct: 144 AVITVPAYFSDSQRAATKDAGAIAGLNVLRIINEPTAAAIAYGLDAKSDKPKNVLIFDLG 203
Query: 185 GGTFDVSILTIEDGIFEVKSTAG 253
GGTFDVS+L I+ G+FEV +TAG
Sbjct: 204 GGTFDVSLLKIQGGVFEVLATAG 226
Score = 124 bits (298), Expect = 2e-29
Identities = 57/82 (69%), Positives = 69/82 (84%)
Frame = +1
Query: 256 THLGGEVFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEID 435
THLGGE FDN +V HF+QEFKRK K D++ + RALRRLR+ACERAKR LSS TQ ++E+D
Sbjct: 228 THLGGEDFDNALVEHFIQEFKRKQKIDISDDPRALRRLRSACERAKRALSSVTQTTVEVD 287
Query: 436 SLFEGIDFYTSITRARFEELNA 501
SL GIDF +SITRARFE++NA
Sbjct: 288 SLSNGIDFSSSITRARFEDINA 309
Score = 93.5 bits (222), Expect = 3e-20
Identities = 45/83 (54%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Frame = +3
Query: 510 RSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXX 689
++T++PV K L+D+K+ KA +HDIVLVGGSTRIPKVQ+L+ DFF+G+ LNKSINPDE
Sbjct: 313 KATIDPVAKVLKDSKVPKADVHDIVLVGGSTRIPKVQRLVSDFFDGRALNKSINPDEAVA 372
Query: 690 XXXXXXXXIL-HGDKSEEVQDLL 755
+L + S++ QDLL
Sbjct: 373 YGAAVQAAVLTNKADSDKTQDLL 395
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 130 bits (315), Expect = 2e-31
Identities = 61/84 (72%), Positives = 73/84 (86%)
Frame = +2
Query: 2 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDL 181
NAV+TVPAYFNDSQRQATK AG I+GLNVLR++NEPTAAA+AYGLDKK + V +FDL
Sbjct: 185 NAVVTVPAYFNDSQRQATKAAGAIAGLNVLRVVNEPTAAALAYGLDKK--NDAIVAVFDL 242
Query: 182 GGGTFDVSILTIEDGIFEVKSTAG 253
GGGTFD+SIL + +G+FEV+ST G
Sbjct: 243 GGGTFDISILELNNGVFEVRSTNG 266
Score = 58.8 bits (136), Expect = 8e-10
Identities = 26/73 (35%), Positives = 47/73 (64%)
Frame = +3
Query: 507 VRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXX 686
VR T++P +++L+DA + ++I++++LVGG TR+P+V + ++ F +E KS+NPDE
Sbjct: 356 VRRTIDPCKRALKDANLQTSEINEVILVGGMTRMPRVVETVKSIFK-REPAKSVNPDEAV 414
Query: 687 XXXXXXXXXILHG 725
+L G
Sbjct: 415 AIGAAIQGGVLSG 427
Score = 56.8 bits (131), Expect = 3e-09
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Frame = +1
Query: 256 THLGGEVFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEID 435
THLGGE FD +V H V+ FK+ DL+ ++ A++R+R A E+AK LSS ++ I +
Sbjct: 268 THLGGEDFDVALVRHIVETFKKNEGLDLSKDRLAVQRIREAAEKAKCELSSLSKTDISLP 327
Query: 436 SLFEGI----DFYTSITRARFEEL 495
+ I+RA+FE+L
Sbjct: 328 FITADATGPKHINMEISRAQFEKL 351
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 74.9 bits (176), Expect = 1e-14
Identities = 36/77 (46%), Positives = 51/77 (66%)
Frame = +1
Query: 259 HLGGEVFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDS 438
+LGGE + +VN F +EF++K D N R+L +LR CE KR LS+ T AS +DS
Sbjct: 251 NLGGEQLTDVLVNFFAKEFEKKNGIDPRKNARSLAKLRAQCEITKRVLSNGTTASAAVDS 310
Query: 439 LFEGIDFYTSITRARFE 489
L +GIDF++SI R R++
Sbjct: 311 LADGIDFHSSINRLRYD 327
Score = 54.4 bits (125), Expect = 2e-08
Identities = 23/77 (29%), Positives = 49/77 (63%)
Frame = +2
Query: 8 VITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGG 187
V++VP YF D+QR+A + A +GL VL++I++P A +A ++ ++ V++ + G
Sbjct: 167 VMSVPVYFTDAQRKALESAANEAGLPVLQLIHDPAAVILALMYSEEVLIDKTVVVANFGA 226
Query: 188 GTFDVSILTIEDGIFEV 238
+VS+++++ G+ +
Sbjct: 227 TRSEVSVVSVKGGLMTI 243
Score = 31.5 bits (68), Expect = 0.13
Identities = 12/46 (26%), Positives = 27/46 (58%)
Frame = +3
Query: 528 VEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKS 665
V +++ A M+ I +++L GG++ PK+ L++ F + + +S
Sbjct: 341 VTEAVEKANMEPFDISEVILAGGASNTPKLTSLMESIFPEQTIIRS 386
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 71.3 bits (167), Expect = 1e-13
Identities = 37/86 (43%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Frame = +2
Query: 2 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGE----RNVL 169
+ VI++PA+F D QR+A +A I+GLN LR++N+ AAA+ YG+ K E R V
Sbjct: 143 DVVISIPAWFTDIQRRALLEAANIAGLNPLRLMNDNAAAALTYGITKTDLPEPESPRRVA 202
Query: 170 IFDLGGGTFDVSILTIEDGIFEVKST 247
I D G + VSI+ G F +KST
Sbjct: 203 IVDFGHSNYSVSIVEFSRGQFHIKST 228
Score = 69.3 bits (162), Expect = 5e-13
Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 4/94 (4%)
Frame = +1
Query: 226 YLRGEIHRRRT----HLGGEVFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAK 393
+ RG+ H + T +LG D ++++F EFK KYK D+ +N +A RL TA ER K
Sbjct: 218 FSRGQFHIKSTVCDRNLGSRNMDKALIDYFAAEFKEKYKIDVLSNPKATFRLATAVERLK 277
Query: 394 RTLSSSTQASIEIDSLFEGIDFYTSITRARFEEL 495
+ LS++ A + ++ + ID + I R+ FEEL
Sbjct: 278 KVLSANANAPLNVEMIMNDIDASSFIKRSDFEEL 311
Score = 46.0 bits (104), Expect = 6e-06
Identities = 21/52 (40%), Positives = 37/52 (71%)
Frame = +3
Query: 525 PVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 680
P+EK+L A + K ++ I +VGG TR+P V++++ ++F GK L+ ++N DE
Sbjct: 322 PIEKALELAGIKKEDLYSIEMVGGCTRVPIVKEVIANYF-GKGLSFTLNQDE 372
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 55.2 bits (127), Expect = 1e-08
Identities = 29/82 (35%), Positives = 44/82 (53%)
Frame = +1
Query: 262 LGGEVFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSL 441
L G + +++ F +K+ DL+ N RAL RL R K LS++++A I+ L
Sbjct: 262 LSGNEINRKLIGFMKNSFYQKHGIDLSHNHRALARLEKEALRVKHILSANSEAIASIEEL 321
Query: 442 FEGIDFYTSITRARFEELNADL 507
+GIDF ITR+ E L D+
Sbjct: 322 ADGIDFRLKITRSVLESLCKDM 343
Score = 53.2 bits (122), Expect = 4e-08
Identities = 20/56 (35%), Positives = 40/56 (71%)
Frame = +3
Query: 513 STMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 680
+ +EP+ K+L+ A + ++I+ I+L GG++RIP +Q L D+ + +++K++N DE
Sbjct: 346 AAVEPINKALKKANLTFSEINSIILFGGASRIPFIQSTLADYVSSDKISKNVNADE 401
Score = 46.0 bits (104), Expect = 6e-06
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +2
Query: 8 VITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK-GTGERNVLIFDLG 184
V+TVP +FN+ QR +A I +VL +I++ A AI Y L + T +I+D G
Sbjct: 164 VLTVPPHFNELQRSILLEAARILNKHVLALIDDNVAVAIEYSLSRSFSTDPTYNIIYDSG 223
Query: 185 GGTFDVSILTIE 220
G+ ++++ +
Sbjct: 224 SGSTSATVISFD 235
>SPBC215.10 |||haloacid dehalogenase-like
hydrolase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 29.5 bits (63), Expect = 0.54
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +2
Query: 323 NTKRTSLPTRELLGVCVLHVRGQR-GPCHRPHKRALR*ILSLR 448
N K+ LP E + + + V G GP H+PH R LR + LR
Sbjct: 9 NQKKNVLPKPEDIQLIICDVDGTLLGPDHKPHPRNLRALKYLR 51
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 29.1 bits (62), Expect = 0.72
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +1
Query: 289 MVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTS 468
+++ F EFK++ K D + L+ L + C R R SS SI ++ + +
Sbjct: 711 ILSSFSNEFKKRLKSDGTSIAHWLQGLASFCGRVFRRYSSLDCTSI-VEYVIKQFKVNQM 769
Query: 469 ITRARFEELNADLSGL-PWS 525
+EL + ++GL PW+
Sbjct: 770 FDLVILKELLSQMTGLQPWT 789
>SPAC4G9.17c |mrps5||mitochondrial ribosomal protein subunit
S5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 387
Score = 27.9 bits (59), Expect = 1.7
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +1
Query: 421 SIEIDSLFEGIDFYTSITRARFEELNADLSGLPWSQWRSLSVMP 552
+ EI S F DF + E +D+SG+P S R+L +P
Sbjct: 186 TFEISSKFSPFDFGDAGKSTSDAEFLSDISGIPKSDLRALMFVP 229
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 26.2 bits (55), Expect = 5.0
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -3
Query: 576 RGFEPYPSWHHGETSPLAP 520
+ +P P+ HG+TSPL+P
Sbjct: 420 KAIKPMPTSIHGQTSPLSP 438
>SPBC660.16 |||phosphogluconate dehydrogenase, decarboxylating
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 492
Score = 25.8 bits (54), Expect = 6.7
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +2
Query: 131 GLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGAPTWEVRSLTIA 289
G + K TG++ LI DL + I++ G ++ A W++ + IA
Sbjct: 309 GPNTKFTGDKKQLIDDLEDALYASKIISYAQGFMLMREAAKEYGWKLNNAGIA 361
>SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2280
Score = 25.8 bits (54), Expect = 6.7
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = +2
Query: 134 LDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGAPTW 265
LDK G+ I GG T SIL +GI VK W
Sbjct: 48 LDKAPAGKVKDYIASHGGHTVITSILIANNGIAAVKEIRSIRKW 91
>SPCC188.09c |||glycoprotein |Schizosaccharomyces pombe|chr
3|||Manual
Length = 609
Score = 25.4 bits (53), Expect = 8.8
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Frame = +2
Query: 143 KGTGERNVLIFDLGGGTF-DVSILTIEDG---IFEVKSTAGAPTWEVRSLTIAWSTTLSR 310
+GT + + + GT +T+ DG + +++ TAG T + S + ++TTL+
Sbjct: 71 RGTTNHSTIYTTINSGTVASTYTVTLADGDVVVKDIEPTAGTVTTTITSGSHEFTTTLAE 130
Query: 311 SS 316
+S
Sbjct: 131 AS 132
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,270,652
Number of Sequences: 5004
Number of extensions: 68728
Number of successful extensions: 290
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 286
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 361294920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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