Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0640
(755 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 156 2e-38
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 154 8e-38
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 153 2e-37
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 139 2e-33
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 96 2e-20
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 2e-12
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 69 4e-12
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 66 2e-11
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 2e-11
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 3e-09
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 58 6e-09
SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 5e-07
SB_24074| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_29289| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5) 31 1.3
SB_41892| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_55650| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015) 30 2.3
SB_28120| Best HMM Match : ScdA_N (HMM E-Value=6.5) 29 3.1
SB_5252| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_52092| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06) 29 5.4
SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_38784| Best HMM Match : Apo-VLDL-II (HMM E-Value=8.3) 28 7.1
SB_55740| Best HMM Match : C1_1 (HMM E-Value=3.6) 28 7.1
SB_14895| Best HMM Match : CcmE (HMM E-Value=5.3) 28 7.1
SB_46403| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_34605| Best HMM Match : APG6 (HMM E-Value=0.94) 28 9.4
SB_45916| Best HMM Match : Cadherin (HMM E-Value=0) 28 9.4
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 156 bits (379), Expect = 2e-38
Identities = 73/84 (86%), Positives = 80/84 (95%)
Frame = +1
Query: 256 THLGGEVFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEID 435
THLGGE FDN+MV+HFV++FK+KYKKD+ NKRA+RRLRTACERAKRTLSSSTQASIEID
Sbjct: 226 THLGGEDFDNKMVDHFVKQFKQKYKKDITPNKRAMRRLRTACERAKRTLSSSTQASIEID 285
Query: 436 SLFEGIDFYTSITRARFEELNADL 507
SLFEGIDFYTSITRARFEELN DL
Sbjct: 286 SLFEGIDFYTSITRARFEELNQDL 309
Score = 155 bits (376), Expect = 4e-38
Identities = 75/84 (89%), Positives = 81/84 (96%)
Frame = +2
Query: 2 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDL 181
+AV+TVPAYF+DSQRQATKDAGTI+GLNVLRIINEPTAAAIAYGLDKK ERNVLI+DL
Sbjct: 141 DAVVTVPAYFHDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGVERNVLIYDL 200
Query: 182 GGGTFDVSILTIEDGIFEVKSTAG 253
GGGTFDVS+LTIEDGIFEVKSTAG
Sbjct: 201 GGGTFDVSVLTIEDGIFEVKSTAG 224
Score = 105 bits (252), Expect = 4e-23
Identities = 51/84 (60%), Positives = 62/84 (73%), Gaps = 2/84 (2%)
Frame = +3
Query: 510 RSTMEPVEKSLRDAKMD--KAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEX 683
+ T EPVE+++RD+K+ K IHDIVLVGGSTRIPK+QK+LQ+ F GKELNKSINPDE
Sbjct: 311 KKTTEPVEQAIRDSKIPGGKESIHDIVLVGGSTRIPKIQKMLQELFGGKELNKSINPDEA 370
Query: 684 XXXXXXXXXXILHGDKSEEVQDLL 755
ILHGDK + V+DLL
Sbjct: 371 VAYGAAVQAAILHGDKDDTVKDLL 394
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 154 bits (373), Expect = 8e-38
Identities = 75/84 (89%), Positives = 79/84 (94%)
Frame = +2
Query: 2 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDL 181
+AV+TVPAYFNDSQRQATKDAG ISGLNVLRIINEPTAAAIAYGLDKK ERNVLIFDL
Sbjct: 234 DAVVTVPAYFNDSQRQATKDAGVISGLNVLRIINEPTAAAIAYGLDKKVGQERNVLIFDL 293
Query: 182 GGGTFDVSILTIEDGIFEVKSTAG 253
GGGTFDVS+L+IEDGIFEVKST G
Sbjct: 294 GGGTFDVSVLSIEDGIFEVKSTHG 317
Score = 149 bits (360), Expect = 3e-36
Identities = 70/84 (83%), Positives = 78/84 (92%)
Frame = +1
Query: 256 THLGGEVFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEID 435
THLGGE FDN MV+ FV++FK+KYKKD+ NKRALRRLRTACERAKRTLSSSTQASIEID
Sbjct: 319 THLGGEDFDNNMVDFFVKQFKQKYKKDITPNKRALRRLRTACERAKRTLSSSTQASIEID 378
Query: 436 SLFEGIDFYTSITRARFEELNADL 507
SL++GIDFYTSITRARFEE+NA L
Sbjct: 379 SLYDGIDFYTSITRARFEEMNAHL 402
Score = 109 bits (263), Expect = 2e-24
Identities = 52/83 (62%), Positives = 65/83 (78%), Gaps = 1/83 (1%)
Frame = +3
Query: 510 RSTMEPVEKSLRDAKMD-KAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXX 686
+ T+EPVEK+++D+K++ K +I +IV+VGGSTRIPK+Q LLQ+FFNGKELNKSINPDE
Sbjct: 404 KKTLEPVEKAIKDSKLESKEKIDEIVMVGGSTRIPKIQSLLQNFFNGKELNKSINPDEAV 463
Query: 687 XXXXXXXXXILHGDKSEEVQDLL 755
ILHGDKSE QDLL
Sbjct: 464 AYGAAVQAAILHGDKSEATQDLL 486
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/22 (90%), Positives = 22/22 (100%)
Frame = +2
Query: 2 NAVITVPAYFNDSQRQATKDAG 67
+AV+TVPAYFNDSQRQATKDAG
Sbjct: 166 DAVVTVPAYFNDSQRQATKDAG 187
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 153 bits (370), Expect = 2e-37
Identities = 74/85 (87%), Positives = 82/85 (96%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDL 181
+AVITVPAYFNDSQRQATKDAGTI+GLNVLR+INEPTAAA+AYGLDK +GE+NVLIFDL
Sbjct: 141 SAVITVPAYFNDSQRQATKDAGTIAGLNVLRVINEPTAAALAYGLDKSLSGEKNVLIFDL 200
Query: 182 GGGTFDVSILTIEDG-IFEVKSTAG 253
GGGTFDVSILTI+DG +FEVKSTAG
Sbjct: 201 GGGTFDVSILTIDDGSLFEVKSTAG 225
Score = 150 bits (363), Expect = 1e-36
Identities = 69/84 (82%), Positives = 78/84 (92%)
Frame = +1
Query: 256 THLGGEVFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEID 435
THLGGE FDNR+VNHFV EFKRKYKKD++ N RA+RRLRTACERAKRTLSSST+ASIE+D
Sbjct: 227 THLGGEDFDNRLVNHFVAEFKRKYKKDMSKNSRAMRRLRTACERAKRTLSSSTEASIEVD 286
Query: 436 SLFEGIDFYTSITRARFEELNADL 507
SLFEGIDFYT I+RARFE+L +DL
Sbjct: 287 SLFEGIDFYTKISRARFEDLCSDL 310
Score = 104 bits (249), Expect = 9e-23
Identities = 46/81 (56%), Positives = 62/81 (76%)
Frame = +3
Query: 513 STMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXX 692
S ++PV K+L DAK K+ IH++VLVGGSTR+PK+QK+L+++F+GK LNKSINPDE
Sbjct: 313 SCLDPVNKALSDAKFSKSDIHEVVLVGGSTRVPKIQKMLEEYFSGKSLNKSINPDEAVAY 372
Query: 693 XXXXXXXILHGDKSEEVQDLL 755
IL GDKS+EV+D+L
Sbjct: 373 GAAVQAAILSGDKSDEVKDVL 393
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 139 bits (337), Expect = 2e-33
Identities = 64/84 (76%), Positives = 78/84 (92%)
Frame = +2
Query: 2 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDL 181
+AV+TVPAYFND+QRQATKDAG I+GL V+RIINEPTAAAIAYG+DKK GE+N+L+FDL
Sbjct: 839 HAVVTVPAYFNDAQRQATKDAGAIAGLTVMRIINEPTAAAIAYGMDKK-EGEKNILVFDL 897
Query: 182 GGGTFDVSILTIEDGIFEVKSTAG 253
GGGTFDVS+LTI++G+FEV +T G
Sbjct: 898 GGGTFDVSLLTIDNGVFEVVATNG 921
Score = 95.5 bits (227), Expect = 4e-20
Identities = 44/84 (52%), Positives = 61/84 (72%)
Frame = +1
Query: 256 THLGGEVFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEID 435
THLGGE FD ++ HF++ +K+K K++ + RA+++LR E+AKR LS+ QA +EI+
Sbjct: 923 THLGGEDFDQNVMEHFIKLYKKKKGKNIRKDNRAVQKLRREVEKAKRALSTQHQARVEIE 982
Query: 436 SLFEGIDFYTSITRARFEELNADL 507
S FEG DF +TRARFEELNA L
Sbjct: 983 SFFEGEDFSEMLTRARFEELNAKL 1006
Score = 86.6 bits (205), Expect = 2e-17
Identities = 39/74 (52%), Positives = 55/74 (74%)
Frame = +3
Query: 510 RSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXX 689
+ST++PV+K L DA + K++IH+IVLVGGSTRIPKVQ+L++DFF GKE ++ INPDE
Sbjct: 1008 KSTLKPVQKVLEDADLKKSEIHEIVLVGGSTRIPKVQQLVKDFFEGKEPSRGINPDEAVA 1067
Query: 690 XXXXXXXXILHGDK 731
+L G++
Sbjct: 1068 YGAAVQAGVLGGEE 1081
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 96.3 bits (229), Expect = 2e-20
Identities = 47/83 (56%), Positives = 62/83 (74%)
Frame = +2
Query: 5 AVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLG 184
AV++VPA F+ QR AT A +++G+ VLR+INEPTAAA+AYGL KK G NV++ DLG
Sbjct: 172 AVMSVPAEFDIKQRNATVKAASLAGITVLRVINEPTAAALAYGLHKK-EGVANVMVVDLG 230
Query: 185 GGTFDVSILTIEDGIFEVKSTAG 253
GGT DVS+L I+ G+F + AG
Sbjct: 231 GGTLDVSLLNIQGGMFVTMAMAG 253
Score = 62.9 bits (146), Expect = 3e-10
Identities = 22/56 (39%), Positives = 44/56 (78%)
Frame = +3
Query: 510 RSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPD 677
+ ++P+ + L + ++ K ++ ++VLVGGSTR+PK+++L+Q+FF+GK N +I+P+
Sbjct: 344 KKVLQPIRRVLAEVELPKEEVDEVVLVGGSTRVPKIRQLIQEFFDGKPPNVAIDPE 399
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 70.1 bits (164), Expect = 2e-12
Identities = 39/94 (41%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Frame = +1
Query: 259 HLGGEVFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSST-QASIEID 435
+LGG FD +V HF QEFK KYK D+ ++ +A +L CE+ K+ +S++T + I I+
Sbjct: 287 NLGGRDFDYVLVEHFAQEFKTKYKIDVHSSIKAKIKLGAECEKLKKLMSANTSEIPINIE 346
Query: 436 SLFEGIDFYTSITRARFEELNADLSGLPWSQWRS 537
E D + + RA+FEEL ADL L + RS
Sbjct: 347 CFMEDKDVHGRMKRAQFEELAADLLKLVEAPLRS 380
Score = 66.5 bits (155), Expect = 2e-11
Identities = 35/89 (39%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Frame = +2
Query: 2 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKG---TGERNVLI 172
+ VI+VP+Y+ D QR+ DA +GLN LR++N+ TA ++AYG+ K+ RNV+
Sbjct: 198 DCVISVPSYYTDRQRRCMLDASATAGLNCLRLMNDTTAVSLAYGIYKQDLPTDKPRNVVF 257
Query: 173 FDLGGGTFDVSILTIEDGIFEVKSTAGAP 259
D+G + V I G +V STA P
Sbjct: 258 VDIGHSSLQVCITAFLKGQLKVLSTAVEP 286
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 68.9 bits (161), Expect = 4e-12
Identities = 46/79 (58%), Positives = 50/79 (63%), Gaps = 26/79 (32%)
Frame = +2
Query: 5 AVITVPAYFNDSQRQATKDAGTISGLN------------------------VLRIINEPT 112
AVITVPA+FND+QRQATKDAGTI+GL+ VLRIINEPT
Sbjct: 41 AVITVPAHFNDAQRQATKDAGTIAGLDVLSRTASERPPSRFRRRRPHGRSRVLRIINEPT 100
Query: 113 AAAIAYGLDKK--GTGERN 163
AAAIAYGLDK G ERN
Sbjct: 101 AAAIAYGLDKARGGKAERN 119
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 66.5 bits (155), Expect = 2e-11
Identities = 31/74 (41%), Positives = 49/74 (66%)
Frame = +3
Query: 507 VRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXX 686
+ T+ P +K L+DA+++K +I D++LVGG TR+PKVQ+ +QD F G+ +K++NPDE
Sbjct: 66 INRTVGPCKKCLQDAEINKGEIGDVLLVGGMTRMPKVQQTVQDIF-GRVPSKAVNPDEAV 124
Query: 687 XXXXXXXXXILHGD 728
+L GD
Sbjct: 125 AIGAAIQGGVLAGD 138
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 66.5 bits (155), Expect = 2e-11
Identities = 31/74 (41%), Positives = 49/74 (66%)
Frame = +3
Query: 507 VRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXX 686
+ T+ P +K L+DA+++K +I D++LVGG TR+PKVQ+ +QD F G+ +K++NPDE
Sbjct: 121 INRTVGPCKKCLQDAEINKGEIGDVLLVGGMTRMPKVQQTVQDIF-GRVPSKAVNPDEAV 179
Query: 687 XXXXXXXXXILHGD 728
+L GD
Sbjct: 180 AIGAAIQGGVLAGD 193
Score = 62.1 bits (144), Expect = 5e-10
Identities = 35/88 (39%), Positives = 51/88 (57%), Gaps = 4/88 (4%)
Frame = +1
Query: 256 THLGGEVFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEID 435
T+LGGE FDN ++ + EFK++ DL+ + AL+RLR A E+AK LSSS Q I +
Sbjct: 33 TYLGGEDFDNTLLKFLIAEFKKESGVDLSKDSMALQRLREAAEKAKIELSSSVQTDINLP 92
Query: 436 SLFEGID----FYTSITRARFEELNADL 507
+ ++R++FE L ADL
Sbjct: 93 YITVDASGPKHLNMKLSRSKFESLVADL 120
Score = 48.8 bits (111), Expect = 5e-06
Identities = 19/30 (63%), Positives = 26/30 (86%)
Frame = +2
Query: 164 VLIFDLGGGTFDVSILTIEDGIFEVKSTAG 253
+ ++DLGGGTFD+SIL I+ G+FEVK+T G
Sbjct: 2 IAVYDLGGGTFDISILEIQKGVFEVKATNG 31
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 59.3 bits (137), Expect = 3e-09
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Frame = +1
Query: 262 LGGEVFDNRMVNHFVQEFKR--KYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEID 435
LGG D R+ +H VQ FK+ K+K ++ + RA+ + R K+ LS++ + +I+
Sbjct: 210 LGGHAIDMRLRDHLVQLFKKNYKFKGEVTQSSRAMAKFYKEALRVKQVLSANNEIFAQIE 269
Query: 436 SLFEGIDFYTSITRARFEELNADL 507
+F+G DF +TR EE+ DL
Sbjct: 270 GVFDGKDFRVKVTREELEEMCQDL 293
Score = 53.2 bits (122), Expect = 2e-07
Identities = 27/74 (36%), Positives = 47/74 (63%), Gaps = 4/74 (5%)
Frame = +2
Query: 2 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK----GTGERNVL 169
+ V+TVP +FN ++R+A A + GLNVL+I+N TA A+ YGL ++ T E++ +
Sbjct: 107 DVVLTVPPFFNQAERRALLRAAELVGLNVLQIMNSNTAVALNYGLFQQKSFNDTLEKHFM 166
Query: 170 IFDLGGGTFDVSIL 211
+D+G + +I+
Sbjct: 167 FYDMGASSTVATIV 180
Score = 47.6 bits (108), Expect = 1e-05
Identities = 24/52 (46%), Positives = 30/52 (57%)
Frame = +3
Query: 525 PVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 680
PV ++L+ A M I +VLVGG R+PKVQ L EL K+IN DE
Sbjct: 300 PVNRALKSASMTMNDIDSVVLVGGGIRVPKVQDALLRAVKKPELAKNINADE 351
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 58.4 bits (135), Expect = 6e-09
Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Frame = +1
Query: 262 LGGEVFDNRMVNHFVQEFKR-----KYKKDLATNKRALRRLRTACERAKRTLSSSTQASI 426
LGG FD +++ +FKR K+K D TNKR+ +L+T+ E+ K LS+ A+
Sbjct: 189 LGGRNFDEVLLDLLANDFKRQVLLWKWKIDPLTNKRSKTKLQTSAEQCKNILSTLESANC 248
Query: 427 EIDSLFEGIDFYTSITRARFEELNADLSGLPW 522
+DSL EGIDF ++R LN S W
Sbjct: 249 SVDSLCEGIDFQGQVSRMS-RRLNTGESDKIW 279
>SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 52.0 bits (119), Expect = 5e-07
Identities = 23/63 (36%), Positives = 40/63 (63%)
Frame = +3
Query: 555 MDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKS 734
+ ++ + ++LVGG+TR PK+Q+LL+++F GKE+ + I+PDE IL G K
Sbjct: 35 LKQSSMIQVILVGGATRTPKIQQLLKNYFVGKEICRRISPDEVVAYGAAVQASILMGRKE 94
Query: 735 EEV 743
++
Sbjct: 95 ADM 97
>SB_24074| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 87
Score = 38.7 bits (86), Expect = 0.005
Identities = 17/38 (44%), Positives = 28/38 (73%)
Frame = +3
Query: 567 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 680
+I + +VGGSTRIP ++ ++++ F GKEL ++N DE
Sbjct: 6 EIDSVEIVGGSTRIPAIKDIIKNVF-GKELMTTMNADE 42
>SB_29289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 956
Score = 31.1 bits (67), Expect = 1.0
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 300 LCPGVQEEIQKGPRYQQESS*AFAYCM*EGK 392
LCP ++ + GP +++E AFA C+ GK
Sbjct: 169 LCPSPEQNGEPGPMFEREGGDAFANCVARGK 199
>SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5)
Length = 634
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +2
Query: 164 VLIFDLGGGTFDVSILTIEDGIFEVK 241
V I+DLG GT++++IL E G++ ++
Sbjct: 319 VPIYDLGNGTYEMAILFHEPGVYSIR 344
>SB_41892| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 382
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 291 GQPLCPGVQEEIQKGPRYQQESS*AFAYCM 380
G LCP ++ + GP +++E S AFA C+
Sbjct: 218 GYKLCPLPEQNGEPGPMFEREGSDAFANCV 247
>SB_55650| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1172
Score = 29.9 bits (64), Expect = 2.3
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +2
Query: 206 ILTIEDGIFEVKSTAGAPTWEVRSLTIAWSTTLSR-SSRGNTKRTSLPTRELLGVCVLHV 382
ILT+E+G+F+ ++ E L+ +WS R + G K S+P G C LH
Sbjct: 799 ILTLENGLFKQHDSSIRELVEFLELSRSWSLLHPRWAPCGLAKVLSVP-HCCWGSCALHH 857
Query: 383 RGQR 394
GQR
Sbjct: 858 LGQR 861
>SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015)
Length = 600
Score = 29.9 bits (64), Expect = 2.3
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +2
Query: 170 IFDLGGGTFDVSILTIEDGIFEV 238
+FDLG G+++V L +E G++ V
Sbjct: 311 VFDLGNGSYEVLFLVMEPGVYRV 333
>SB_28120| Best HMM Match : ScdA_N (HMM E-Value=6.5)
Length = 452
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 300 LCPGVQEEIQKGPRYQQESS*AFAYCM*EGK 392
LCP ++ GP +++E S AFA C+ GK
Sbjct: 206 LCPLPEQNGGPGPMFEREGSDAFANCVTRGK 236
>SB_5252| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 541
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -3
Query: 294 DHAIVKDLTSQVGAPAVDFTSKIPSSMVRMDTSKVPP 184
+ A + D T Q AP D TSK P+ RMD +K P
Sbjct: 490 EQACMDDATKQ--APIDDATSKKPNEQARMDATKQAP 524
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -3
Query: 294 DHAIVKDLTSQVGAPAVDFTSKIPSSMVRMDTSKVPP 184
+ A + D T Q AP D TSK P+ RMD +K P
Sbjct: 354 EQARMDDATKQ--APIDDATSKKPNEQARMDATKQAP 388
>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 29.1 bits (62), Expect = 4.1
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
Frame = -2
Query: 247 GGFHLEDTILDGKDGHVEGTAAEVK--DKYISFSSTLFVKTVSNRSSS--RFIDDSENVQ 80
G F L D+ G++GH EG+ +EV + ++ + F +T S S F ++S ++Q
Sbjct: 285 GVFVLVDSKDSGENGHTEGSNSEVGTIENFVKTQTKQFKQTACKYSESNLEFNENSAHLQ 344
Query: 79 ---ARDGTC 62
AR TC
Sbjct: 345 VYNARISTC 353
>SB_52092| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 28.7 bits (61), Expect = 5.4
Identities = 25/94 (26%), Positives = 41/94 (43%)
Frame = +1
Query: 229 LRGEIHRRRTHLGGEVFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSS 408
LR E+H R + N E +K + DLA R + +A T+SS
Sbjct: 189 LRKELHTTRQFINS-------TNSKTLEEHQKTRADLA---RLWAHSQELWNQANETVSS 238
Query: 409 STQASIEIDSLFEGIDFYTSITRARFEELNADLS 510
+ +I L E + YT+ T R +++ AD++
Sbjct: 239 ISTVKEKITQLDEKLSEYTNRTMERIDQIKADMT 272
>SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06)
Length = 799
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = -3
Query: 285 IVKDLTSQVGAPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVP 145
I D S PA+ S +PS V +D VP P I+ + VP
Sbjct: 259 ITLDQHSTYLTPAISTQSTLPSGTVTLDQHNVPHPSGTITLDQHNVP 305
>SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 177 TSAAVPSTCPSLPSRMVSSR*NPPPAHP 260
T A P P++PSR +R PPP P
Sbjct: 784 TKPATPRVPPNIPSRPPGARPTPPPPPP 811
>SB_38784| Best HMM Match : Apo-VLDL-II (HMM E-Value=8.3)
Length = 439
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 300 LCPGVQEEIQKGPRYQQESS*AFAYCM 380
LCP ++ + GP +++E S AFA C+
Sbjct: 107 LCPLPEQNGEPGPMFEREGSDAFANCV 133
>SB_55740| Best HMM Match : C1_1 (HMM E-Value=3.6)
Length = 533
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 300 LCPGVQEEIQKGPRYQQESS*AFAYCM 380
LCP ++ + GP +++E S AFA C+
Sbjct: 74 LCPLPEQNGEPGPMFEREGSDAFANCV 100
>SB_14895| Best HMM Match : CcmE (HMM E-Value=5.3)
Length = 485
Score = 28.3 bits (60), Expect = 7.1
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = -3
Query: 303 KVVDHAIVKDLTSQVGAPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPF 142
K++ A +L ++V + +D S+IP S + VPPPRS ++ +P PF
Sbjct: 27 KLIMSAHELELFTKVNSVQID--SQIPGSTFQTVLHPVPPPRS-VAMDNAPKPF 77
>SB_46403| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 733
Score = 27.9 bits (59), Expect = 9.4
Identities = 23/70 (32%), Positives = 28/70 (40%), Gaps = 4/70 (5%)
Frame = +2
Query: 104 EPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDG----IFEVKSTAGAPTWEV 271
EP A YGLD + GE L GG D L + G ++ + G P EV
Sbjct: 261 EPPAITSVYGLDFEAEGELR-CEDSLSGGASDAIDLVRKYGFPTNVYRIADVVGRPLSEV 319
Query: 272 RSLTIAWSTT 301
LT A T
Sbjct: 320 LQLTGAIQLT 329
>SB_34605| Best HMM Match : APG6 (HMM E-Value=0.94)
Length = 1047
Score = 27.9 bits (59), Expect = 9.4
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = -3
Query: 318 LELLDKVVDHAIVKDLTSQVGAPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPF 142
LE L + + +D V VD+ K PS R+ P P + T R+PVP+
Sbjct: 124 LEPLLNELKSEVAEDYDFSVRKAIVDYVLKDPSEKNRLHIKSTPKPFPQ-RTVRAPVPW 181
>SB_45916| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 1774
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -2
Query: 172 DKYISFSSTLFVKTVSNRSSSRFIDDSEN 86
+K ISF +LF+ VSN S+ R+I +E+
Sbjct: 752 NKVISFGPSLFMDKVSNASAGRYICIAES 780
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,539,269
Number of Sequences: 59808
Number of extensions: 554070
Number of successful extensions: 1951
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1939
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2058295707
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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