Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0640
(755 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 164 7e-41
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 162 2e-40
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 147 8e-36
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 147 8e-36
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 144 6e-35
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 142 2e-34
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 140 1e-33
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 140 1e-33
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 138 5e-33
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 136 2e-32
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 103 1e-22
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 103 1e-22
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 89 4e-18
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 64 1e-10
Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical pr... 58 9e-09
Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical pr... 58 9e-09
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 56 4e-08
M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein ( C.ele... 44 2e-04
Z35598-2|CAA84651.2| 656|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z92849-8|CAB07427.3| 523|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical pr... 28 6.2
X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin prot... 28 6.2
AF047660-5|AAM54168.1| 733|Caenorhabditis elegans Nuclear hormo... 28 6.2
L08403-5|AAT92077.1| 531|Caenorhabditis elegans Hypothetical pr... 28 8.2
L08403-4|AAA28021.1| 529|Caenorhabditis elegans Hypothetical pr... 28 8.2
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 28 8.2
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 164 bits (398), Expect = 7e-41
Identities = 79/84 (94%), Positives = 82/84 (97%)
Frame = +2
Query: 2 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDL 181
+AV+TVPAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGLDKKG GERNVLIFDL
Sbjct: 142 DAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLDKKGHGERNVLIFDL 201
Query: 182 GGGTFDVSILTIEDGIFEVKSTAG 253
GGGTFDVSILTIEDGIFEVKSTAG
Sbjct: 202 GGGTFDVSILTIEDGIFEVKSTAG 225
Score = 155 bits (375), Expect = 4e-38
Identities = 75/84 (89%), Positives = 79/84 (94%)
Frame = +1
Query: 256 THLGGEVFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEID 435
THLGGE FDNRMVNHF EFKRK+KKDLA+N RALRRLRTACERAKRTLSSS+QASIEID
Sbjct: 227 THLGGEDFDNRMVNHFCAEFKRKHKKDLASNPRALRRLRTACERAKRTLSSSSQASIEID 286
Query: 436 SLFEGIDFYTSITRARFEELNADL 507
SLFEGIDFYT+ITRARFEEL ADL
Sbjct: 287 SLFEGIDFYTNITRARFEELCADL 310
Score = 128 bits (309), Expect = 4e-30
Identities = 63/82 (76%), Positives = 67/82 (81%)
Frame = +3
Query: 510 RSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXX 689
RSTM+PVEKSLRDAKMDK+Q+HDIVLVGGSTRIPKVQKLL D F+GKELNKSINPDE
Sbjct: 312 RSTMDPVEKSLRDAKMDKSQVHDIVLVGGSTRIPKVQKLLSDLFSGKELNKSINPDEAVA 371
Query: 690 XXXXXXXXILHGDKSEEVQDLL 755
IL GDKSE VQDLL
Sbjct: 372 YGAAVQAAILSGDKSEAVQDLL 393
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 162 bits (394), Expect = 2e-40
Identities = 78/84 (92%), Positives = 81/84 (96%)
Frame = +2
Query: 2 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDL 181
+AV+TVP YFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGLDKKG GERNVLIFDL
Sbjct: 142 DAVVTVPTYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLDKKGHGERNVLIFDL 201
Query: 182 GGGTFDVSILTIEDGIFEVKSTAG 253
GGGTFDVSILTIEDGIFEVKSTAG
Sbjct: 202 GGGTFDVSILTIEDGIFEVKSTAG 225
Score = 150 bits (363), Expect = 1e-36
Identities = 73/84 (86%), Positives = 76/84 (90%)
Frame = +1
Query: 256 THLGGEVFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEID 435
THLGGE FDNRMVNHF EFKRK+KKDLA+N RALRRLRTACERA TLSSS QASIEID
Sbjct: 227 THLGGEDFDNRMVNHFCAEFKRKHKKDLASNPRALRRLRTACERANETLSSSCQASIEID 286
Query: 436 SLFEGIDFYTSITRARFEELNADL 507
SLFEGIDFYT+ITRARFEEL ADL
Sbjct: 287 SLFEGIDFYTNITRARFEELCADL 310
Score = 128 bits (309), Expect = 4e-30
Identities = 63/82 (76%), Positives = 67/82 (81%)
Frame = +3
Query: 510 RSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXX 689
RSTM+PVEKSLRDAKMDK+Q+HDIVLVGGSTRIPKVQKLL D F+GKELNKSINPDE
Sbjct: 312 RSTMDPVEKSLRDAKMDKSQVHDIVLVGGSTRIPKVQKLLSDLFSGKELNKSINPDEALA 371
Query: 690 XXXXXXXXILHGDKSEEVQDLL 755
IL GDKSE VQDLL
Sbjct: 372 YGAAVQAAILSGDKSEAVQDLL 393
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 147 bits (356), Expect = 8e-36
Identities = 69/84 (82%), Positives = 80/84 (95%)
Frame = +2
Query: 2 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDL 181
NAV+TVPAYFND+QRQATKDAGTI+GLNV+RIINEPTAAAIAYGLDKK GERN+L+FDL
Sbjct: 172 NAVVTVPAYFNDAQRQATKDAGTIAGLNVVRIINEPTAAAIAYGLDKK-DGERNILVFDL 230
Query: 182 GGGTFDVSILTIEDGIFEVKSTAG 253
GGGTFDVS+LTI++G+FEV +T G
Sbjct: 231 GGGTFDVSMLTIDNGVFEVLATNG 254
Score = 99.5 bits (237), Expect = 2e-21
Identities = 45/84 (53%), Positives = 64/84 (76%)
Frame = +1
Query: 256 THLGGEVFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEID 435
THLGGE FD R++ +F++ +K+K KDL +KRA+++LR E+AKR LS+ Q +EI+
Sbjct: 256 THLGGEDFDQRVMEYFIKLYKKKSGKDLRKDKRAVQKLRREVEKAKRALSTQHQTKVEIE 315
Query: 436 SLFEGIDFYTSITRARFEELNADL 507
SLF+G DF ++TRA+FEELN DL
Sbjct: 316 SLFDGEDFSETLTRAKFEELNMDL 339
Score = 83.8 bits (198), Expect = 1e-16
Identities = 36/74 (48%), Positives = 54/74 (72%)
Frame = +3
Query: 510 RSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXX 689
R+T++PV+K L D+ + K +H+IVLVGGSTRIPKVQ+L+++FFNGKE ++ INPDE
Sbjct: 341 RATLKPVQKVLEDSDLKKDDVHEIVLVGGSTRIPKVQQLIKEFFNGKEPSRGINPDEAVA 400
Query: 690 XXXXXXXXILHGDK 731
++ G++
Sbjct: 401 YGAAVQGGVISGEE 414
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 147 bits (356), Expect = 8e-36
Identities = 69/84 (82%), Positives = 80/84 (95%)
Frame = +2
Query: 2 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDL 181
NAV+TVPAYFND+QRQATKDAGTI+GLNV+RIINEPTAAAIAYGLDKK GERN+L+FDL
Sbjct: 172 NAVVTVPAYFNDAQRQATKDAGTIAGLNVVRIINEPTAAAIAYGLDKK-DGERNILVFDL 230
Query: 182 GGGTFDVSILTIEDGIFEVKSTAG 253
GGGTFDVS+LTI++G+FEV +T G
Sbjct: 231 GGGTFDVSMLTIDNGVFEVLATNG 254
Score = 99.5 bits (237), Expect = 2e-21
Identities = 45/84 (53%), Positives = 64/84 (76%)
Frame = +1
Query: 256 THLGGEVFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEID 435
THLGGE FD R++ +F++ +K+K KDL +KRA+++LR E+AKR LS+ Q +EI+
Sbjct: 256 THLGGEDFDQRVMEYFIKLYKKKSGKDLRKDKRAVQKLRREVEKAKRALSTQHQTKVEIE 315
Query: 436 SLFEGIDFYTSITRARFEELNADL 507
SLF+G DF ++TRA+FEELN DL
Sbjct: 316 SLFDGEDFSETLTRAKFEELNMDL 339
Score = 83.8 bits (198), Expect = 1e-16
Identities = 36/74 (48%), Positives = 54/74 (72%)
Frame = +3
Query: 510 RSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXX 689
R+T++PV+K L D+ + K +H+IVLVGGSTRIPKVQ+L+++FFNGKE ++ INPDE
Sbjct: 341 RATLKPVQKVLEDSDLKKDDVHEIVLVGGSTRIPKVQQLIKEFFNGKEPSRGINPDEAVA 400
Query: 690 XXXXXXXXILHGDK 731
++ G++
Sbjct: 401 YGAAVQGGVISGEE 414
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 144 bits (349), Expect = 6e-35
Identities = 67/84 (79%), Positives = 79/84 (94%)
Frame = +2
Query: 2 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDL 181
NAV+TVPAYFND+Q+QATKDAG+I+GLNV+RIINEPTAAAIAYGLDKK GERN+L+FDL
Sbjct: 169 NAVVTVPAYFNDAQKQATKDAGSIAGLNVVRIINEPTAAAIAYGLDKK-DGERNILVFDL 227
Query: 182 GGGTFDVSILTIEDGIFEVKSTAG 253
GGGTFDVS+LTI+ G+FEV +T G
Sbjct: 228 GGGTFDVSLLTIDSGVFEVLATNG 251
Score = 97.9 bits (233), Expect = 7e-21
Identities = 45/84 (53%), Positives = 63/84 (75%)
Frame = +1
Query: 256 THLGGEVFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEID 435
THLGGE FD R++ +F++ +K+K KDL + RA+++LR E+AKR LS+ Q IEI+
Sbjct: 253 THLGGEDFDQRVMEYFIKLYKKKSGKDLRKDNRAVQKLRREVEKAKRALSTQHQTKIEIE 312
Query: 436 SLFEGIDFYTSITRARFEELNADL 507
SLF+G DF ++TRA+FEELN DL
Sbjct: 313 SLFDGEDFSETLTRAKFEELNMDL 336
Score = 86.6 bits (205), Expect = 2e-17
Identities = 37/57 (64%), Positives = 49/57 (85%)
Frame = +3
Query: 510 RSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 680
R+T++PV+K L DA M K +H+IVLVGGSTRIPKVQ+L++D+FNGKE ++ INPDE
Sbjct: 338 RATLKPVQKVLEDADMKKTDVHEIVLVGGSTRIPKVQQLIKDYFNGKEPSRGINPDE 394
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 142 bits (344), Expect = 2e-34
Identities = 70/85 (82%), Positives = 78/85 (91%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDL 181
+AVITVPAYFNDSQRQATKDA TI+GLN +RIINEPTAAA+AYGLDK T E+N+LIFDL
Sbjct: 141 DAVITVPAYFNDSQRQATKDAATIAGLNAIRIINEPTAAALAYGLDKGITDEKNILIFDL 200
Query: 182 GGGTFDVSILTIEDG-IFEVKSTAG 253
GGGTFDVSIL+I +G IFEVKSTAG
Sbjct: 201 GGGTFDVSILSIAEGSIFEVKSTAG 225
Score = 134 bits (324), Expect = 6e-32
Identities = 61/84 (72%), Positives = 75/84 (89%)
Frame = +1
Query: 256 THLGGEVFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEID 435
THLGGE FD+R++ HF+ EFKRK KD+++N RA+RRLRTACERAKRTLSSST+A++E+D
Sbjct: 227 THLGGEDFDSRVLQHFMTEFKRKTGKDISSNPRAIRRLRTACERAKRTLSSSTEATVEVD 286
Query: 436 SLFEGIDFYTSITRARFEELNADL 507
SLF+G DFY+ ITRARFEEL ADL
Sbjct: 287 SLFDGTDFYSKITRARFEELCADL 310
Score = 104 bits (249), Expect = 8e-23
Identities = 48/82 (58%), Positives = 62/82 (75%)
Frame = +3
Query: 510 RSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXX 689
R T+EPVEK+LRDAK DK +I ++VLVGGSTRIPK+QKLL++FFNGK+LN SINPDE
Sbjct: 312 RKTLEPVEKALRDAKTDKGRIDEVVLVGGSTRIPKIQKLLKEFFNGKDLNCSINPDEAVA 371
Query: 690 XXXXXXXXILHGDKSEEVQDLL 755
+L G K + ++D+L
Sbjct: 372 FGAAVQAAVLSGVKDDTIKDVL 393
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 140 bits (339), Expect = 1e-33
Identities = 70/85 (82%), Positives = 77/85 (90%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDL 181
+AVITVPAYFNDSQRQATKDA TI+GLN +RIINEPTAAA+AYGLDK E+NVLIFDL
Sbjct: 141 DAVITVPAYFNDSQRQATKDAATIAGLNAIRIINEPTAAALAYGLDKGIQDEKNVLIFDL 200
Query: 182 GGGTFDVSILTIEDG-IFEVKSTAG 253
GGGTFDVSIL+I +G IFEVKSTAG
Sbjct: 201 GGGTFDVSILSIAEGSIFEVKSTAG 225
Score = 131 bits (317), Expect = 5e-31
Identities = 62/84 (73%), Positives = 71/84 (84%)
Frame = +1
Query: 256 THLGGEVFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEID 435
THLGGE FD RM+ HF+ EFKRK KD++ N RA+RRLRTACERAKRTLSSS++A +E+D
Sbjct: 227 THLGGEDFDQRMLQHFMNEFKRKTGKDISPNPRAIRRLRTACERAKRTLSSSSEACVEVD 286
Query: 436 SLFEGIDFYTSITRARFEELNADL 507
SLFEGID T ITRARFEEL ADL
Sbjct: 287 SLFEGIDLCTKITRARFEELCADL 310
Score = 109 bits (262), Expect = 2e-24
Identities = 50/82 (60%), Positives = 64/82 (78%)
Frame = +3
Query: 510 RSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXX 689
R T+EPVEK+LRDAK+DK++I ++VLVGGSTR+PK+QKLL+DFFNGKELN SINPDE
Sbjct: 312 RKTLEPVEKALRDAKLDKSKIDEVVLVGGSTRVPKIQKLLKDFFNGKELNCSINPDEAVA 371
Query: 690 XXXXXXXXILHGDKSEEVQDLL 755
+L G K E ++D+L
Sbjct: 372 FGAAVQAAVLSGVKDETIKDVL 393
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 140 bits (339), Expect = 1e-33
Identities = 70/85 (82%), Positives = 77/85 (90%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDL 181
+AVITVPAYFNDSQRQATKDA TI+GLN +RIINEPTAAA+AYGLDK E+NVLIFDL
Sbjct: 141 DAVITVPAYFNDSQRQATKDAATIAGLNAIRIINEPTAAALAYGLDKGIQDEKNVLIFDL 200
Query: 182 GGGTFDVSILTIEDG-IFEVKSTAG 253
GGGTFDVSIL+I +G IFEVKSTAG
Sbjct: 201 GGGTFDVSILSIAEGSIFEVKSTAG 225
Score = 131 bits (317), Expect = 5e-31
Identities = 62/84 (73%), Positives = 71/84 (84%)
Frame = +1
Query: 256 THLGGEVFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEID 435
THLGGE FD RM+ HF+ EFKRK KD++ N RA+RRLRTACERAKRTLSSS++A +E+D
Sbjct: 227 THLGGEDFDQRMLQHFMNEFKRKTGKDISPNPRAIRRLRTACERAKRTLSSSSEACVEVD 286
Query: 436 SLFEGIDFYTSITRARFEELNADL 507
SLFEGID T ITRARFEEL ADL
Sbjct: 287 SLFEGIDLCTKITRARFEELCADL 310
Score = 109 bits (262), Expect = 2e-24
Identities = 50/82 (60%), Positives = 64/82 (78%)
Frame = +3
Query: 510 RSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXX 689
R T+EPVEK+LRDAK+DK++I ++VLVGGSTR+PK+QKLL+DFFNGKELN SINPDE
Sbjct: 312 RKTLEPVEKALRDAKLDKSKIDEVVLVGGSTRVPKIQKLLKDFFNGKELNCSINPDEAVA 371
Query: 690 XXXXXXXXILHGDKSEEVQDLL 755
+L G K E ++D+L
Sbjct: 372 FGAAVQAAVLSGVKDETIKDVL 393
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 138 bits (333), Expect = 5e-33
Identities = 65/84 (77%), Positives = 75/84 (89%)
Frame = +2
Query: 2 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDL 181
NAV+TVPAYFNDSQRQATKDAG ISGLNVLR+INEPTAAA+AYGLD K G++ + ++DL
Sbjct: 166 NAVVTVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAALAYGLD-KDAGDKIIAVYDL 224
Query: 182 GGGTFDVSILTIEDGIFEVKSTAG 253
GGGTFDVSIL I+ G+FEVKST G
Sbjct: 225 GGGTFDVSILEIQKGVFEVKSTNG 248
Score = 66.5 bits (155), Expect = 2e-11
Identities = 31/77 (40%), Positives = 50/77 (64%)
Frame = +3
Query: 507 VRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXX 686
++ T+EP K+L DA++ +QI D++LVGG +R+PKVQ +Q+ F GK +K++NPDE
Sbjct: 338 IKRTIEPCRKALHDAEVKSSQIADVLLVGGMSRMPKVQATVQEIF-GKVPSKAVNPDEAV 396
Query: 687 XXXXXXXXXILHGDKSE 737
+L GD ++
Sbjct: 397 AMGAAIQGAVLAGDVTD 413
Score = 64.9 bits (151), Expect = 6e-11
Identities = 36/88 (40%), Positives = 53/88 (60%), Gaps = 4/88 (4%)
Frame = +1
Query: 256 THLGGEVFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEID 435
T LGGE FD+ +V+H V EFK++ DL + +A++RLR A E+AK LSS+TQ I +
Sbjct: 250 TFLGGEDFDHALVHHLVGEFKKEQGVDLTKDPQAMQRLREAAEKAKCELSSTTQTDINLP 309
Query: 436 SLFEGID----FYTSITRARFEELNADL 507
+ +TRA+FE++ DL
Sbjct: 310 YITMDQSGPKHLNLKLTRAKFEQIVGDL 337
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 136 bits (328), Expect = 2e-32
Identities = 64/84 (76%), Positives = 74/84 (88%)
Frame = +2
Query: 2 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDL 181
N V+TVPAYFNDSQRQATKDAG ISGLNVLR+INEPTAAA+AYGLD K G++ + ++DL
Sbjct: 166 NPVVTVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAALAYGLD-KDAGDKIIAVYDL 224
Query: 182 GGGTFDVSILTIEDGIFEVKSTAG 253
GGGTFDVSIL I+ G+FEVKST G
Sbjct: 225 GGGTFDVSILEIQKGVFEVKSTNG 248
Score = 64.9 bits (151), Expect = 6e-11
Identities = 36/88 (40%), Positives = 53/88 (60%), Gaps = 4/88 (4%)
Frame = +1
Query: 256 THLGGEVFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEID 435
T LGGE FD+ +V+H V EFK++ DL + +A++RLR A E+AK LSS+TQ I +
Sbjct: 250 TFLGGEDFDHALVHHLVGEFKKEQGVDLTKDPQAMQRLREAAEKAKCELSSTTQTDINLP 309
Query: 436 SLFEGID----FYTSITRARFEELNADL 507
+ +TRA+FE++ DL
Sbjct: 310 YITMDQSGPKHLNLKLTRAKFEQIVGDL 337
Score = 63.3 bits (147), Expect = 2e-10
Identities = 30/77 (38%), Positives = 48/77 (62%)
Frame = +3
Query: 507 VRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXX 686
++ T+EP L DA++ +QI D++LVGG +R+PKVQ +Q+ F GK +K++NPDE
Sbjct: 338 IKRTIEPCRNVLHDAEVKSSQIADVLLVGGMSRMPKVQATVQEIF-GKVPSKAVNPDEAV 396
Query: 687 XXXXXXXXXILHGDKSE 737
+L GD ++
Sbjct: 397 AMGAAIQGAVLAGDVTD 413
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 103 bits (248), Expect = 1e-22
Identities = 49/84 (58%), Positives = 64/84 (76%)
Frame = +2
Query: 2 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDL 181
+AVITVPAYFN +QR+AT++A I+GL VLRI+NEPTAAAIAY L + RN+LI+DL
Sbjct: 138 SAVITVPAYFNATQRRATEEAAEIAGLKVLRILNEPTAAAIAYSLKGQRLSRRNILIYDL 197
Query: 182 GGGTFDVSILTIEDGIFEVKSTAG 253
GGGTFDV+ + ++ VK+ G
Sbjct: 198 GGGTFDVAAVNVDGPRITVKAKGG 221
Score = 73.3 bits (172), Expect = 2e-13
Identities = 38/78 (48%), Positives = 52/78 (66%)
Frame = +1
Query: 256 THLGGEVFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEID 435
THLGG+ DN ++ ++EFK ++ DL N RAL+R+R A E AK TLS+S+ A IE++
Sbjct: 223 THLGGQDIDNIIMIKMLEEFKNRHGIDLKGNYRALKRIRKAAEVAKITLSASSVARIELE 282
Query: 436 SLFEGIDFYTSITRARFE 489
L GIDF I+R FE
Sbjct: 283 CLHLGIDFIMRISRTDFE 300
Score = 60.1 bits (139), Expect = 2e-09
Identities = 33/81 (40%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Frame = +3
Query: 513 STMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLL-QDFFNGKELNKSINPDEXXX 689
+T+ VE+ +R+A + K+QI++IVLVGGSTRIP ++ ++ Q F + + +SI+PDE
Sbjct: 309 ATVIHVERVIREANLKKSQINEIVLVGGSTRIPILKNIIKQSFESNTRICESIHPDEAVA 368
Query: 690 XXXXXXXXILHGDKSEEVQDL 752
+L G +EEVQD+
Sbjct: 369 YGAAIMAAVLSG--AEEVQDM 387
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 103 bits (248), Expect = 1e-22
Identities = 49/84 (58%), Positives = 64/84 (76%)
Frame = +2
Query: 2 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDL 181
+AVITVPAYFN +QR+AT++A I+GL VLRI+NEPTAAAIAY L + RN+LI+DL
Sbjct: 138 SAVITVPAYFNATQRRATEEAAEIAGLKVLRILNEPTAAAIAYSLKGQRLSRRNILIYDL 197
Query: 182 GGGTFDVSILTIEDGIFEVKSTAG 253
GGGTFDV+ + ++ VK+ G
Sbjct: 198 GGGTFDVAAVNVDGPRITVKAKGG 221
Score = 73.3 bits (172), Expect = 2e-13
Identities = 38/78 (48%), Positives = 52/78 (66%)
Frame = +1
Query: 256 THLGGEVFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEID 435
THLGG+ DN ++ ++EFK ++ DL N RAL+R+R A E AK TLS+S+ A IE++
Sbjct: 223 THLGGQDIDNIIMIKMLEEFKNRHGIDLKGNYRALKRIRKAAEVAKITLSASSVARIELE 282
Query: 436 SLFEGIDFYTSITRARFE 489
L GIDF I+R FE
Sbjct: 283 CLHLGIDFIMRISRTDFE 300
Score = 60.1 bits (139), Expect = 2e-09
Identities = 33/81 (40%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Frame = +3
Query: 513 STMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLL-QDFFNGKELNKSINPDEXXX 689
+T+ VE+ +R+A + K+QI++IVLVGGSTRIP ++ ++ Q F + + +SI+PDE
Sbjct: 309 ATVIHVERVIREANLKKSQINEIVLVGGSTRIPILKNIIKQSFESNTRICESIHPDEAVA 368
Query: 690 XXXXXXXXILHGDKSEEVQDL 752
+L G +EEVQD+
Sbjct: 369 YGAAIMAAVLSG--AEEVQDM 387
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 88.6 bits (210), Expect = 4e-18
Identities = 43/82 (52%), Positives = 58/82 (70%)
Frame = +2
Query: 8 VITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGG 187
VI+ PA FN+ QR T A I+ + V R+I+EPTAAA+AYGL KK G NV++ DLGG
Sbjct: 178 VISCPAEFNEKQRNFTAKAAEIAEMEVRRVISEPTAAALAYGLHKK-QGVENVVVVDLGG 236
Query: 188 GTFDVSILTIEDGIFEVKSTAG 253
GT DVS+L ++ G+F ++ AG
Sbjct: 237 GTLDVSVLWLQGGVFVTQAMAG 258
Score = 50.4 bits (115), Expect = 1e-06
Identities = 22/51 (43%), Positives = 35/51 (68%)
Frame = +3
Query: 525 PVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPD 677
P+ +L DA +D A + +IVLVGGST++P V+K++ FF K N ++P+
Sbjct: 348 PITAALADANLDTADVDEIVLVGGSTQVPAVRKIVGRFFK-KSANYGVDPE 397
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 64.1 bits (149), Expect = 1e-10
Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 5/88 (5%)
Frame = +2
Query: 2 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGE-----RNV 166
+ V+ VP+YF D QR+A A +GLN LRI+NE TA A+AYG+ K+ E RNV
Sbjct: 141 DCVLAVPSYFTDVQRRAVLSAIQYAGLNSLRIVNETTAIALAYGIYKQDLPEEDAKSRNV 200
Query: 167 LIFDLGGGTFDVSILTIEDGIFEVKSTA 250
+ D+G + S++ G ++ +T+
Sbjct: 201 VFLDIGHSSTQASLVAFNRGKLQMVNTS 228
Score = 53.2 bits (122), Expect = 2e-07
Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +1
Query: 265 GGEVFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSS-TQASIEIDSL 441
GG FD + HF +EFK KY D AT+ R RL CER K+ +S++ T + I+
Sbjct: 234 GGIWFDALIREHFRKEFKTKYGIDAATSPRPWLRLLDECERVKKQMSANQTPIPLNIECF 293
Query: 442 FEGIDFYTSITRARFEELNADL 507
E D + R FE+L A +
Sbjct: 294 MEDKDVTGKMQRQEFEDLAAPI 315
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/38 (44%), Positives = 29/38 (76%)
Frame = +3
Query: 567 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 680
+I +I +VGGS+RIP ++++++D F GKE ++N DE
Sbjct: 337 EIDEIEIVGGSSRIPMIREIVKDLF-GKEPKTTMNQDE 373
>Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical
protein T14G8.3b protein.
Length = 905
Score = 57.6 bits (133), Expect = 9e-09
Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Frame = +1
Query: 262 LGGEVFDNRMVNHFVQEFKRKYK--KDLATNKRALRRLRTACERAKRTLSSSTQASIEID 435
LGG NR+ +H + F+ K KD++TN RA+ +L ER K+ LS++ +++
Sbjct: 248 LGGLEITNRLRDHLEKVFRDTVKTSKDISTNARAIGKLHKEAERVKQVLSANKDTYAQVE 307
Query: 436 SLFEGIDFYTSITRARFEELNADL 507
SLFE +F +TR E++ DL
Sbjct: 308 SLFEEQNFRAKVTREELEKMIEDL 331
Score = 52.8 bits (121), Expect = 3e-07
Identities = 26/64 (40%), Positives = 46/64 (71%), Gaps = 3/64 (4%)
Frame = +2
Query: 2 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL-DKKGTGER--NVLI 172
+ VITVP + N ++R+A A I+GLN+L+++N+ +AAA+ YG+ +K E+ ++LI
Sbjct: 147 DVVITVPIFLNQAERRAIASAAEIAGLNLLQLLNDGSAAALNYGVFRRKEITEKPTHMLI 206
Query: 173 FDLG 184
+D+G
Sbjct: 207 YDMG 210
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/52 (32%), Positives = 32/52 (61%)
Frame = +3
Query: 525 PVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 680
P+ ++ A++ I +VL+G TR+PKV+++L+ KE++ +N DE
Sbjct: 338 PILDAIGMAQISTNDIDLVVLMGAGTRVPKVKEILKTILKDKEISNFLNTDE 389
>Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical
protein T14G8.3a protein.
Length = 921
Score = 57.6 bits (133), Expect = 9e-09
Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Frame = +1
Query: 262 LGGEVFDNRMVNHFVQEFKRKYK--KDLATNKRALRRLRTACERAKRTLSSSTQASIEID 435
LGG NR+ +H + F+ K KD++TN RA+ +L ER K+ LS++ +++
Sbjct: 264 LGGLEITNRLRDHLEKVFRDTVKTSKDISTNARAIGKLHKEAERVKQVLSANKDTYAQVE 323
Query: 436 SLFEGIDFYTSITRARFEELNADL 507
SLFE +F +TR E++ DL
Sbjct: 324 SLFEEQNFRAKVTREELEKMIEDL 347
Score = 52.8 bits (121), Expect = 3e-07
Identities = 26/64 (40%), Positives = 46/64 (71%), Gaps = 3/64 (4%)
Frame = +2
Query: 2 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL-DKKGTGER--NVLI 172
+ VITVP + N ++R+A A I+GLN+L+++N+ +AAA+ YG+ +K E+ ++LI
Sbjct: 163 DVVITVPIFLNQAERRAIASAAEIAGLNLLQLLNDGSAAALNYGVFRRKEITEKPTHMLI 222
Query: 173 FDLG 184
+D+G
Sbjct: 223 YDMG 226
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/52 (32%), Positives = 32/52 (61%)
Frame = +3
Query: 525 PVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 680
P+ ++ A++ I +VL+G TR+PKV+++L+ KE++ +N DE
Sbjct: 354 PILDAIGMAQISTNDIDLVVLMGAGTRVPKVKEILKTILKDKEISNFLNTDE 405
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 55.6 bits (128), Expect = 4e-08
Identities = 27/73 (36%), Positives = 49/73 (67%), Gaps = 3/73 (4%)
Frame = +2
Query: 2 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL-DKKGTGER--NVLI 172
+ VITVP YF ++R A + A ++GL VL++IN+ TAAA+++G+ +K GE+ +++
Sbjct: 163 DVVITVPVYFTPAERLAVERAAQMAGLTVLQLINDGTAAALSHGIFRRKEIGEKPQRLMV 222
Query: 173 FDLGGGTFDVSIL 211
+D+G +I+
Sbjct: 223 YDMGAAKTTATIV 235
Score = 54.8 bits (126), Expect = 6e-08
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Frame = +1
Query: 262 LGGEVFDNRMVNHFVQEFKRKY--KKDLATNKRALRRLRTACERAKRTLSSSTQASIEID 435
LGG NR+ +H ++ F++ Y K + TN+RA+ + ER K+ LS++ + +I+
Sbjct: 261 LGGIEMTNRLRDHLIEMFEKNYKPKTKVNTNRRAMTKFSKEAERLKQVLSANAEHFAQIE 320
Query: 436 SLFEGIDFYTSITRARFEELNADL 507
S E ID +TR F L +D+
Sbjct: 321 SAHEDIDAKLKVTREDFNHLISDM 344
Score = 51.2 bits (117), Expect = 8e-07
Identities = 23/53 (43%), Positives = 35/53 (66%)
Frame = +3
Query: 522 EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 680
EP+E++LR A++ I VL+G TR+PKVQ+++Q KE+ K +N DE
Sbjct: 350 EPIEQALRMAQIPIDDIDQFVLMGAGTRVPKVQEIVQKTIGTKEIGKFLNTDE 402
>M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein (
C.elegans heat shockprotein 4 gene, 3' end. ).
Length = 288
Score = 43.6 bits (98), Expect = 2e-04
Identities = 17/25 (68%), Positives = 23/25 (92%)
Frame = +3
Query: 606 IPKVQKLLQDFFNGKELNKSINPDE 680
IPKVQ+L++D+FNGKE ++ INPDE
Sbjct: 1 IPKVQQLIKDYFNGKEPSRGINPDE 25
>Z35598-2|CAA84651.2| 656|Caenorhabditis elegans Hypothetical
protein F10F2.4 protein.
Length = 656
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = -1
Query: 581 NIVDLSLIHLGITERLLHWLHGRPDRSAFSSSKRARVIDV*KSIPSKRESISM 423
++VDL + + G+ E LHW H R +S R+ID KS+P ++ +
Sbjct: 478 SLVDLDISNSGL-EFSLHWRHLRTLKSLILRGNEIRIIDS-KSLPENLRTLDL 528
>Z92849-8|CAB07427.3| 523|Caenorhabditis elegans Hypothetical
protein H12D21.10 protein.
Length = 523
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -1
Query: 680 LVRVNRFVELLSIKEILQELLHLGDTSGATHQYN 579
L R F ++L+IKEIL+ L HL + S YN
Sbjct: 350 LSRSTAFRKILNIKEILRSLGHLPNVSTRVVDYN 383
>Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 28.3 bits (60), Expect = 6.2
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Frame = +1
Query: 232 RGEIHRRRTHLGGEVFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSS 411
R + L EV D ++ +Q K + L + A RRL A ER + L S
Sbjct: 204 RQRLQAENNDLLKEVHDQKVQLDNLQHVKYTLAQQL---EEARRRLEDA-ERERSQLQSQ 259
Query: 412 T-QASIEIDSLFEGIDFYTSITRARFEELNADLSGLPWSQWRS 537
Q +E+DS+ +D SI R+ E +L+ +QW+S
Sbjct: 260 LHQVQLELDSVRTALD-EESIARSDAEH-KLNLANTEITQWKS 300
>Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 28.3 bits (60), Expect = 6.2
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Frame = +1
Query: 232 RGEIHRRRTHLGGEVFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSS 411
R + L EV D ++ +Q K + L + A RRL A ER + L S
Sbjct: 204 RQRLQAENNDLLKEVHDQKVQLDNLQHVKYTLAQQL---EEARRRLEDA-ERERSQLQSQ 259
Query: 412 T-QASIEIDSLFEGIDFYTSITRARFEELNADLSGLPWSQWRS 537
Q +E+DS+ +D SI R+ E +L+ +QW+S
Sbjct: 260 LHQVQLELDSVRTALD-EESIARSDAEH-KLNLANTEITQWKS 300
>X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin
protein.
Length = 882
Score = 28.3 bits (60), Expect = 6.2
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Frame = +1
Query: 232 RGEIHRRRTHLGGEVFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSS 411
R + L EV D ++ +Q K + L + A RRL A ER + L S
Sbjct: 220 RQRLQAENNDLLKEVHDQKVQLDNLQHVKYTLAQQL---EEARRRLEDA-ERERSQLQSQ 275
Query: 412 T-QASIEIDSLFEGIDFYTSITRARFEELNADLSGLPWSQWRS 537
Q +E+DS+ +D SI R+ E +L+ +QW+S
Sbjct: 276 LHQVQLELDSVRTALD-EESIARSDAEH-KLNLANTEITQWKS 316
>AF047660-5|AAM54168.1| 733|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 66, isoform c protein.
Length = 733
Score = 28.3 bits (60), Expect = 6.2
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 5/88 (5%)
Frame = -3
Query: 387 PLTCSTQTPKSSLVGSEVLFVFPLELLDKVVDHAIVKDLTSQVGAPAVDFTSKI--PS-- 220
P+ +T TP+ L G L P ELL + +L VG+PA+ +S PS
Sbjct: 69 PILTATMTPQIGLTGLGSLTSLPPELLLQFA-RLDGFNLLPAVGSPAIPSSSSCSEPSTS 127
Query: 219 -SMVRMDTSKVPPPRSKISTFRSPVPFL 139
+ + +PPP S + P P +
Sbjct: 128 QASTVVSAPTLPPPSPLTSLPQKPAPLM 155
>L08403-5|AAT92077.1| 531|Caenorhabditis elegans Hypothetical
protein F42H10.7b protein.
Length = 531
Score = 27.9 bits (59), Expect = 8.2
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = -3
Query: 600 WSHPPVQYRGFEPYPSWHHGETSPLAPW 517
WS P R P +W G T+P + W
Sbjct: 463 WSRPSSSKRSTTPGSAWSRGSTTPGSSW 490
>L08403-4|AAA28021.1| 529|Caenorhabditis elegans Hypothetical
protein F42H10.7a protein.
Length = 529
Score = 27.9 bits (59), Expect = 8.2
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = -3
Query: 600 WSHPPVQYRGFEPYPSWHHGETSPLAPW 517
WS P R P +W G T+P + W
Sbjct: 461 WSRPSSSKRSTTPGSAWSRGSTTPGSSW 488
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +3
Query: 204 PSLPSRMVSSR*NPPPAHPLGR*GL*QSHGQPLCPGVQEEIQKGP 338
P +P +++ P PA P G G GQP PG + +GP
Sbjct: 242 PGVPGQVIEVPGTPGPAGPPGPPGPIGPPGQPGAPGSSQPGPQGP 286
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,512,812
Number of Sequences: 27780
Number of extensions: 408346
Number of successful extensions: 1458
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1318
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1447
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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