Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0639
         (716 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118326-1|AAM48355.1|  119|Drosophila melanogaster LD19034p pro...    73   5e-13
AE014296-2345|AAN11822.1|  119|Drosophila melanogaster CG6513-PB...    73   5e-13
AE014296-2344|AAF49770.1|  119|Drosophila melanogaster CG6513-PA...    73   5e-13

>AY118326-1|AAM48355.1|  119|Drosophila melanogaster LD19034p
           protein.
          Length = 119

 Score = 72.5 bits (170), Expect = 5e-13
 Identities = 37/60 (61%), Positives = 41/60 (68%)
 Frame = +2

Query: 248 KKIAKGQKFFDSGDYQMAKQRPGNXXXXXXXXXXXXXXXTGDAIPTPETVPLRKTSIIQP 427
           K++ KGQKFFDSGDYQMAKQ+ G                TG+AIPTPETVP RKTSIIQP
Sbjct: 57  KRLQKGQKFFDSGDYQMAKQKGGG-----VKQVFANKVTTGEAIPTPETVPARKTSIIQP 111


>AE014296-2345|AAN11822.1|  119|Drosophila melanogaster CG6513-PB,
           isoform B protein.
          Length = 119

 Score = 72.5 bits (170), Expect = 5e-13
 Identities = 37/60 (61%), Positives = 41/60 (68%)
 Frame = +2

Query: 248 KKIAKGQKFFDSGDYQMAKQRPGNXXXXXXXXXXXXXXXTGDAIPTPETVPLRKTSIIQP 427
           K++ KGQKFFDSGDYQMAKQ+ G                TG+AIPTPETVP RKTSIIQP
Sbjct: 57  KRLQKGQKFFDSGDYQMAKQKGGG-----VKQVFANKVTTGEAIPTPETVPARKTSIIQP 111


>AE014296-2344|AAF49770.1|  119|Drosophila melanogaster CG6513-PA,
           isoform A protein.
          Length = 119

 Score = 72.5 bits (170), Expect = 5e-13
 Identities = 37/60 (61%), Positives = 41/60 (68%)
 Frame = +2

Query: 248 KKIAKGQKFFDSGDYQMAKQRPGNXXXXXXXXXXXXXXXTGDAIPTPETVPLRKTSIIQP 427
           K++ KGQKFFDSGDYQMAKQ+ G                TG+AIPTPETVP RKTSIIQP
Sbjct: 57  KRLQKGQKFFDSGDYQMAKQKGGG-----VKQVFANKVTTGEAIPTPETVPARKTSIIQP 111


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,673,386
Number of Sequences: 53049
Number of extensions: 454939
Number of successful extensions: 809
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 806
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3190721655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)