Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0638
         (731 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    23   2.2  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   3.9  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    22   5.2  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   5.2  
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    22   6.8  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   9.0  

>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = +2

Query: 536 FGWSRICYTFSLCIITFLNYV 598
           FGW  IC    + +++ + Y+
Sbjct: 397 FGWQMICLIVVIALVSIIMYI 417


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -3

Query: 156 PSLDRSPLYPEAYRSRS 106
           PS+DRS ++ E+Y + S
Sbjct: 59  PSIDRSSIHEESYLAES 75


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 10/38 (26%), Positives = 19/38 (50%)
 Frame = +1

Query: 553 LLYIFLMYYNIFELCNVLKFILTYIKYYFHL*FNSLIF 666
           LLY++    + +   N   +IL+   YYF    N +++
Sbjct: 291 LLYVYAQESDYYPDLNEWLYILSGCLYYFSTTINPILY 328


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = +3

Query: 630 ILFSSVI*FSDFCTKV 677
           ILFS V+ F++ C+++
Sbjct: 425 ILFSDVVTFTEICSRI 440


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -3

Query: 729 IIVGLKNSYKNKHMDDKLLLCKNQR 655
           II  L N+Y   + + K L C N R
Sbjct: 81  IISSLSNNYNYNNNNYKKLYCNNYR 105


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +3

Query: 165 HNAPIVQKILDILYATEDGFAP 230
           H   I   +  + Y T+DGF P
Sbjct: 908 HQGQIHLTVAVVQYKTQDGFGP 929


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,067
Number of Sequences: 438
Number of extensions: 4302
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22779405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)