Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0637
(694 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5WPB6 Cluster: NADH dehydrogenase subunit 6; n=25; Neo... 60 5e-08
UniRef50_Q36425 Cluster: NADH-ubiquinone oxidoreductase chain 6;... 59 9e-08
UniRef50_P18933 Cluster: NADH-ubiquinone oxidoreductase chain 6;... 59 9e-08
UniRef50_P34856 Cluster: NADH-ubiquinone oxidoreductase chain 6;... 59 9e-08
UniRef50_P18935 Cluster: Cytochrome b; n=3382; root|Rep: Cytochr... 56 1e-06
UniRef50_Q8WCJ7 Cluster: Cytochrome b; n=2933; root|Rep: Cytochr... 56 1e-06
UniRef50_O78784 Cluster: Cytochrome b; n=653; Coelomata|Rep: Cyt... 55 1e-06
UniRef50_A0EXD5 Cluster: Cytochrome b; n=21; Otophysi|Rep: Cytoc... 53 6e-06
UniRef50_Q3YFJ1 Cluster: Cytochrome b; n=27; Coelomata|Rep: Cyto... 52 1e-05
UniRef50_O47901 Cluster: Cytochrome b; n=17; Euteleostomi|Rep: C... 52 2e-05
UniRef50_Q5ISE6 Cluster: NADH dehydrogenase subunit 6; n=1; Gryl... 52 2e-05
UniRef50_A1BQ48 Cluster: Cytochrome b; n=105; Clupeocephala|Rep:... 51 2e-05
UniRef50_Q2Q1H2 Cluster: NADH dehydrogenase subunit 6; n=1; Time... 50 4e-05
UniRef50_Q9G801 Cluster: NADH dehydrogenase subunit 6; n=2; Tria... 50 7e-05
UniRef50_Q9G3Z8 Cluster: NADH dehydrogenase subunit 6; n=2; Lith... 49 9e-05
UniRef50_Q85QR7 Cluster: NADH dehydrogenase subunit 6; n=1; Tric... 49 1e-04
UniRef50_Q0ZD08 Cluster: NADH dehydrogenase subunit 6; n=1; Camp... 48 2e-04
UniRef50_Q9MLP8 Cluster: NADH dehydrogenase subunit 6; n=2; Limu... 48 3e-04
UniRef50_Q8HD83 Cluster: NADH dehydrogenase subunit 6; n=5; Pleo... 47 4e-04
UniRef50_Q4G2Z5 Cluster: NADH dehydrogenase subunit 6; n=1; Japy... 47 5e-04
UniRef50_A5JF24 Cluster: NADH dehydrogenase subunit 6; n=5; Reti... 47 5e-04
UniRef50_Q6IT26 Cluster: NADH dehydrogenase subunit 6; n=1; Phil... 46 7e-04
UniRef50_Q2TCQ6 Cluster: NADH dehydrogenase subunit 6; n=1; Petr... 46 7e-04
UniRef50_A5D6K0 Cluster: NADH dehydrogenese subunit 6; n=1; Both... 46 7e-04
UniRef50_A4UAW6 Cluster: NADH dehydrogenase subunit 6; n=3; Poly... 46 7e-04
UniRef50_Q76L70 Cluster: NADH dehydrogenase subunit 6; n=5; Euca... 46 0.001
UniRef50_Q5EXI2 Cluster: NADH dehydrogenase subunit 6; n=1; Macr... 45 0.002
UniRef50_Q7YHL6 Cluster: NADH dehydrogenase subunit 6; n=1; Lepi... 45 0.002
UniRef50_P00156 Cluster: Cytochrome b; n=22548; root|Rep: Cytoch... 45 0.002
UniRef50_Q85QQ4 Cluster: NADH dehydrogenase subunit 6; n=1; Gomp... 44 0.004
UniRef50_Q6DVK9 Cluster: NADH dehydrogenase subunit 6; n=1; Ther... 44 0.004
UniRef50_Q09GA3 Cluster: NADH dehydrogenase subunit 6; n=1; Halo... 44 0.004
UniRef50_Q53E81 Cluster: NADH dehydrogenase subunit 6; n=7; Euma... 44 0.005
UniRef50_Q8W9D9 Cluster: Cytochrome-b protein; n=9; Sabanejewia|... 43 0.006
UniRef50_Q5C843 Cluster: NADH dehydrogenase subunit 6; n=1; Neso... 43 0.006
UniRef50_Q2Q1I5 Cluster: NADH dehydrogenase subunit 6; n=1; Scle... 43 0.006
UniRef50_Q8WB11 Cluster: NADH dehydrogenase subunit 6; n=1; Crio... 43 0.008
UniRef50_Q6DVI3 Cluster: NADH dehydrogenase subunit 6; n=1; Parh... 42 0.011
UniRef50_Q5FYG1 Cluster: NADH dehydrogenase subunit 6; n=1; Homa... 42 0.011
UniRef50_Q35127 Cluster: Cytochrome b; n=7; Fungi/Metazoa group|... 42 0.011
UniRef50_Q0H8X2 Cluster: Probable intron-encoded endonuclease bI... 42 0.014
UniRef50_Q6BDS5 Cluster: NADH dehydrogenase subunit 6; n=1; Orth... 42 0.019
UniRef50_P03880 Cluster: Intron-encoded DNA endonuclease I-AniI ... 42 0.019
UniRef50_Q8SHP6 Cluster: Apocytochrome B; n=1; Hypocrea jecorina... 41 0.025
UniRef50_Q70XS0 Cluster: NADH dehydrogenase subunit 6; n=1; Scut... 41 0.033
UniRef50_Q3LRC4 Cluster: NADH dehydrogenase subunit 6; n=5; Unip... 41 0.033
UniRef50_O47500 Cluster: RT-like protein; n=1; Venturia inaequal... 40 0.076
UniRef50_Q2F1S9 Cluster: NADH dehydrogenase subunit 6; n=13; Dap... 39 0.13
UniRef50_Q8M2C1 Cluster: NADH dehydrogenase subunit 6; n=1; Pyro... 38 0.23
UniRef50_Q6SKZ5 Cluster: NADH dehydrogenase subunit 6; n=1; Hutc... 38 0.23
UniRef50_A7E1Q4 Cluster: NADH dehydrogenase subunit 6; n=1; Ache... 38 0.31
UniRef50_Q952F0 Cluster: NADH dehydrogenase subunit 6; n=1; Phas... 37 0.41
UniRef50_Q94R70 Cluster: NADH dehydrogenase subunit 6; n=1; Trib... 37 0.54
UniRef50_P03879 Cluster: Intron-encoded RNA maturase bI4 precurs... 37 0.54
UniRef50_Q9ZZW7 Cluster: Cytochrome b mRNA maturase bI3; n=1; Sa... 37 0.54
UniRef50_P03873 Cluster: Cytochrome b mRNA maturase bI2; n=4; Sa... 37 0.54
UniRef50_Q00228 Cluster: Cytochrome b; n=19; Mytilus|Rep: Cytoch... 37 0.54
UniRef50_Q0QJ89 Cluster: NADH dehydrogenase subunit 6; n=1; Xeno... 36 0.71
UniRef50_A3QU18 Cluster: NADH dehydrogenase subunit 6; n=1; Epip... 36 0.71
UniRef50_Q8HCU2 Cluster: NADH dehydrogenase subunit 6; n=2; Trio... 36 1.2
UniRef50_A0MCU1 Cluster: NADH dehydrogenase subunit 6; n=1; Pria... 35 1.6
UniRef50_Q6SL31 Cluster: NADH dehydrogenase subunit 6; n=1; Argu... 33 5.0
UniRef50_P34857 Cluster: NADH-ubiquinone oxidoreductase chain 6;... 33 5.0
UniRef50_Q6KHY8 Cluster: Putative uncharacterized protein; n=1; ... 33 6.6
UniRef50_Q8WA85 Cluster: NADH dehydrogenase subunit 6; n=1; Thyr... 33 6.6
UniRef50_Q76F81 Cluster: Cytochrome b protein; n=12; Coelomata|R... 33 6.6
UniRef50_P42792 Cluster: Cytochrome b; n=6041; root|Rep: Cytochr... 33 6.6
UniRef50_Q5FID5 Cluster: Polysaccharide polymerase; n=1; Lactoba... 33 8.8
UniRef50_Q55CB6 Cluster: Putative uncharacterized protein; n=1; ... 33 8.8
>UniRef50_Q5WPB6 Cluster: NADH dehydrogenase subunit 6; n=25;
Neoptera|Rep: NADH dehydrogenase subunit 6 - Dermatobia
hominis (human botfly)
Length = 173
Score = 60.1 bits (139), Expect = 5e-08
Identities = 26/47 (55%), Positives = 36/47 (76%)
Frame = +2
Query: 335 FNDENKINLNKIYNNQTSFLTIILIIYLFVNLVAVVKITNIFYGPLR 475
F EN ++LNK+YN T+ LTI+L+ YL + L+A+VKIT +F GPLR
Sbjct: 123 FISENSLSLNKLYNFPTNMLTIMLMNYLLITLIAIVKITKLFKGPLR 169
>UniRef50_Q36425 Cluster: NADH-ubiquinone oxidoreductase chain 6;
n=1; Locusta migratoria|Rep: NADH-ubiquinone
oxidoreductase chain 6 - Locusta migratoria (Migratory
locust)
Length = 173
Score = 59.3 bits (137), Expect = 9e-08
Identities = 32/60 (53%), Positives = 41/60 (68%)
Frame = +2
Query: 296 NSEINKLFTKILFFNDENKINLNKIYNNQTSFLTIILIIYLFVNLVAVVKITNIFYGPLR 475
NSEI L I F E +L K+YNN T +TI+++IYLF+ L+AVVKITNI GP+R
Sbjct: 113 NSEIMNLNYSINF--KEMSTSLVKLYNNPTVIITIMMMIYLFITLLAVVKITNINQGPMR 170
>UniRef50_P18933 Cluster: NADH-ubiquinone oxidoreductase chain 6;
n=58; Neoptera|Rep: NADH-ubiquinone oxidoreductase chain
6 - Drosophila melanogaster (Fruit fly)
Length = 174
Score = 59.3 bits (137), Expect = 9e-08
Identities = 25/60 (41%), Positives = 42/60 (70%)
Frame = +2
Query: 296 NSEINKLFTKILFFNDENKINLNKIYNNQTSFLTIILIIYLFVNLVAVVKITNIFYGPLR 475
N+++ + +F EN ++LNK+YN T+F+TI+L+ YL + L+ +VKIT +F GP+R
Sbjct: 113 NNDMQSIINMNSYFM-ENSLSLNKLYNFPTNFITILLMNYLLITLIVIVKITKLFKGPIR 171
>UniRef50_P34856 Cluster: NADH-ubiquinone oxidoreductase chain 6;
n=59; Endopterygota|Rep: NADH-ubiquinone oxidoreductase
chain 6 - Anopheles gambiae (African malaria mosquito)
Length = 174
Score = 59.3 bits (137), Expect = 9e-08
Identities = 30/63 (47%), Positives = 42/63 (66%)
Frame = +2
Query: 296 NSEINKLFTKILFFNDENKINLNKIYNNQTSFLTIILIIYLFVNLVAVVKITNIFYGPLR 475
N E+ K F+ +EN ++LNK+YN T+ +T++LI YLF+ L+ VKIT FYGPLR
Sbjct: 113 NMEMEK-FSMTNNLINENILSLNKMYNFPTNLITLLLINYLFLTLLVTVKITKKFYGPLR 171
Query: 476 SSN 484
N
Sbjct: 172 PMN 174
>UniRef50_P18935 Cluster: Cytochrome b; n=3382; root|Rep: Cytochrome
b - Drosophila melanogaster (Fruit fly)
Length = 378
Score = 55.6 bits (128), Expect = 1e-06
Identities = 26/50 (52%), Positives = 32/50 (64%)
Frame = +3
Query: 543 KSIRKTHPIFKIINNSLIDLXXXXXXXXXXXXXXLLALCLIIQIITGLFL 692
K +R +HP+FKI NN+L+DL LL LCLIIQI+TGLFL
Sbjct: 3 KPLRNSHPLFKIANNALVDLPAPINISSWWNFGSLLGLCLIIQILTGLFL 52
>UniRef50_Q8WCJ7 Cluster: Cytochrome b; n=2933; root|Rep: Cytochrome
b - Cryptotis parva (Least shrew)
Length = 379
Score = 55.6 bits (128), Expect = 1e-06
Identities = 27/49 (55%), Positives = 32/49 (65%)
Frame = +3
Query: 546 SIRKTHPIFKIINNSLIDLXXXXXXXXXXXXXXLLALCLIIQIITGLFL 692
+IRKTHP+ KIIN+S IDL LL +CLIIQI+TGLFL
Sbjct: 3 NIRKTHPLMKIINSSFIDLPTPSNISSWWNFGSLLGICLIIQILTGLFL 51
>UniRef50_O78784 Cluster: Cytochrome b; n=653; Coelomata|Rep:
Cytochrome b - Capra sibirica (Siberian ibex)
Length = 380
Score = 55.2 bits (127), Expect = 1e-06
Identities = 25/49 (51%), Positives = 32/49 (65%)
Frame = +3
Query: 546 SIRKTHPIFKIINNSLIDLXXXXXXXXXXXXXXLLALCLIIQIITGLFL 692
+IRKTHP+ KI+NN+ IDL LL +CLI+QI+TGLFL
Sbjct: 3 NIRKTHPLMKIVNNTFIDLPTPSNISSWWNFGSLLGICLILQILTGLFL 51
>UniRef50_A0EXD5 Cluster: Cytochrome b; n=21; Otophysi|Rep:
Cytochrome b - Clarias liocephalus
Length = 373
Score = 53.2 bits (122), Expect = 6e-06
Identities = 24/47 (51%), Positives = 31/47 (65%)
Frame = +3
Query: 552 RKTHPIFKIINNSLIDLXXXXXXXXXXXXXXLLALCLIIQIITGLFL 692
RKTHP+FKI+N++LIDL L+ LCL +QI+TGLFL
Sbjct: 1 RKTHPLFKIVNDALIDLPTPSNISTWWNFGSLMLLCLAVQILTGLFL 47
Score = 53.2 bits (122), Expect = 6e-06
Identities = 24/47 (51%), Positives = 31/47 (65%)
Frame = +3
Query: 552 RKTHPIFKIINNSLIDLXXXXXXXXXXXXXXLLALCLIIQIITGLFL 692
RKTHP+FKI+N++LIDL L+ LCL +QI+TGLFL
Sbjct: 188 RKTHPLFKIVNDALIDLPTPSNISTWWNFGSLMLLCLAVQILTGLFL 234
>UniRef50_Q3YFJ1 Cluster: Cytochrome b; n=27; Coelomata|Rep:
Cytochrome b - Laonastes aenigmamus (Laotian rock rat)
Length = 378
Score = 52.0 bits (119), Expect = 1e-05
Identities = 24/49 (48%), Positives = 32/49 (65%)
Frame = +3
Query: 546 SIRKTHPIFKIINNSLIDLXXXXXXXXXXXXXXLLALCLIIQIITGLFL 692
++RK+HP+ KIIN+S IDL LL +CL++QIITGLFL
Sbjct: 3 NLRKSHPLMKIINHSFIDLPAPSNFYSWWNFGSLLGVCLLLQIITGLFL 51
>UniRef50_O47901 Cluster: Cytochrome b; n=17; Euteleostomi|Rep:
Cytochrome b - Leuciscus carolitertii
Length = 345
Score = 51.6 bits (118), Expect = 2e-05
Identities = 25/49 (51%), Positives = 30/49 (61%)
Frame = +3
Query: 546 SIRKTHPIFKIINNSLIDLXXXXXXXXXXXXXXLLALCLIIQIITGLFL 692
S+RKTHP+ KI N +L+DL LL LCLI QI+TGLFL
Sbjct: 3 SLRKTHPLMKIANATLVDLPTPSNISALWNFGSLLGLCLITQILTGLFL 51
>UniRef50_Q5ISE6 Cluster: NADH dehydrogenase subunit 6; n=1;
Gryllotalpa orientalis|Rep: NADH dehydrogenase subunit 6
- Gryllotalpa orientalis (Oriental mole cricket)
Length = 170
Score = 51.6 bits (118), Expect = 2e-05
Identities = 24/48 (50%), Positives = 34/48 (70%)
Frame = +2
Query: 332 FFNDENKINLNKIYNNQTSFLTIILIIYLFVNLVAVVKITNIFYGPLR 475
+ N+ ++ L KIYN T F+TI+L+ YL + L+ +VKI NIF GPLR
Sbjct: 120 WLNNLIQMILMKIYNYPTHFITIMLVFYLLLVLITIVKIINIFKGPLR 167
>UniRef50_A1BQ48 Cluster: Cytochrome b; n=105; Clupeocephala|Rep:
Cytochrome b - Priapella chamulae
Length = 256
Score = 51.2 bits (117), Expect = 2e-05
Identities = 24/49 (48%), Positives = 31/49 (63%)
Frame = +3
Query: 546 SIRKTHPIFKIINNSLIDLXXXXXXXXXXXXXXLLALCLIIQIITGLFL 692
S+RK+HP+ KI N++L+DL LL LCLI QI+TGLFL
Sbjct: 3 SLRKSHPLLKIANDALVDLPAPINISAWWNFGSLLGLCLIAQILTGLFL 51
>UniRef50_Q2Q1H2 Cluster: NADH dehydrogenase subunit 6; n=1; Timema
californicum|Rep: NADH dehydrogenase subunit 6 - Timema
californicum (California timema)
Length = 166
Score = 50.4 bits (115), Expect = 4e-05
Identities = 21/47 (44%), Positives = 34/47 (72%)
Frame = +2
Query: 344 ENKINLNKIYNNQTSFLTIILIIYLFVNLVAVVKITNIFYGPLRSSN 484
E ++ + K YN + +TI+L++YLF+ ++A+ KITNI GPLR+ N
Sbjct: 120 ELEMIMMKFYNLPNNLMTIMLVLYLFLTMIAINKITNIHLGPLRTKN 166
>UniRef50_Q9G801 Cluster: NADH dehydrogenase subunit 6; n=2;
Triatoma|Rep: NADH dehydrogenase subunit 6 - Triatoma
dimidiata (Kissing bug)
Length = 167
Score = 49.6 bits (113), Expect = 7e-05
Identities = 20/47 (42%), Positives = 32/47 (68%)
Frame = +2
Query: 344 ENKINLNKIYNNQTSFLTIILIIYLFVNLVAVVKITNIFYGPLRSSN 484
E I+LNK++N +T++L+ YLF+ ++AV + NI+ GPLR N
Sbjct: 121 EQLISLNKLFNLNNMSITMLLVSYLFLTMIAVTYVANIYEGPLRMKN 167
>UniRef50_Q9G3Z8 Cluster: NADH dehydrogenase subunit 6; n=2;
Lithobius forficatus|Rep: NADH dehydrogenase subunit 6 -
Lithobius forficatus
Length = 158
Score = 49.2 bits (112), Expect = 9e-05
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +2
Query: 305 INKLFTKILFFNDENKINLNKIYNNQTSFLTIILIIYLFVNLVAVVKITNIFYGPLRS 478
+NK + IL+ E +L K+YN Q L + +++YL + L+ VVKITN F GPLRS
Sbjct: 101 LNKTSSLILWNTGEVFNSLIKLYN-QNCMLMLFIVMYLLITLLIVVKITNFFKGPLRS 157
>UniRef50_Q85QR7 Cluster: NADH dehydrogenase subunit 6; n=1;
Tricholepidion gertschi|Rep: NADH dehydrogenase subunit
6 - Tricholepidion gertschi
Length = 172
Score = 48.8 bits (111), Expect = 1e-04
Identities = 21/38 (55%), Positives = 29/38 (76%)
Frame = +2
Query: 365 KIYNNQTSFLTIILIIYLFVNLVAVVKITNIFYGPLRS 478
K+Y S +T+++I Y+F+ L+AV KITNIF GPLRS
Sbjct: 133 KLYMTSVSPITLMMISYMFLTLIAVTKITNIFKGPLRS 170
>UniRef50_Q0ZD08 Cluster: NADH dehydrogenase subunit 6; n=1;
Campodea fragilis|Rep: NADH dehydrogenase subunit 6 -
Campodea fragilis
Length = 169
Score = 48.0 bits (109), Expect = 2e-04
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +2
Query: 332 FFNDENKINLNKIYNNQTSFLTIILIIYLFVNLVAVVKITNIFYGPLRSSN 484
FFN EN + +++N T +TI + IYL + ++ ++KITN + GPL+ N
Sbjct: 119 FFNLENFNMMTNLFSNNTYQITIFMAIYLLLTMIIIIKITNPWQGPLQHKN 169
>UniRef50_Q9MLP8 Cluster: NADH dehydrogenase subunit 6; n=2; Limulus
polyphemus|Rep: NADH dehydrogenase subunit 6 - Limulus
polyphemus (Atlantic horseshoe crab)
Length = 153
Score = 47.6 bits (108), Expect = 3e-04
Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 4/58 (6%)
Frame = +2
Query: 314 LFTKILF----FNDENKINLNKIYNNQTSFLTIILIIYLFVNLVAVVKITNIFYGPLR 475
LFT I F + + KI+++KI++N T+ L+ +L + L+AVVKIT I GP+R
Sbjct: 94 LFTTISFKTSIYPEMYKISISKIFSNLPMLTTLFLVTFLLITLIAVVKITKISQGPIR 151
>UniRef50_Q8HD83 Cluster: NADH dehydrogenase subunit 6; n=5;
Pleocyemata|Rep: NADH dehydrogenase subunit 6 -
Panulirus japonicus (Japanese spiny lobster)
Length = 171
Score = 47.2 bits (107), Expect = 4e-04
Identities = 22/47 (46%), Positives = 33/47 (70%)
Frame = +2
Query: 341 DENKINLNKIYNNQTSFLTIILIIYLFVNLVAVVKITNIFYGPLRSS 481
D + I+ + IYN T LT+++I+YL L+ VV++T+IF GPLR S
Sbjct: 124 DLSSISTHFIYNFPTMSLTLVVILYLLFTLIVVVEMTSIFSGPLRLS 170
>UniRef50_Q4G2Z5 Cluster: NADH dehydrogenase subunit 6; n=1; Japyx
solifugus|Rep: NADH dehydrogenase subunit 6 - Japyx
solifugus
Length = 169
Score = 46.8 bits (106), Expect = 5e-04
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Frame = +2
Query: 317 FTKILFFNDENKIN--LNKIYNNQTSFLTIILIIYLFVNLVAVVKITNIFYGPLR 475
FT + IN + KIY S + +++I YLF+ L+ VVKITN++ GPLR
Sbjct: 112 FTDTMTLTQMPSINTAIMKIYTPNLSIMMVMMITYLFLTLIVVVKITNLWMGPLR 166
>UniRef50_A5JF24 Cluster: NADH dehydrogenase subunit 6; n=5;
Reticulitermes|Rep: NADH dehydrogenase subunit 6 -
Reticulitermes flavipes (Eastern subterranean termite)
Length = 163
Score = 46.8 bits (106), Expect = 5e-04
Identities = 26/64 (40%), Positives = 34/64 (53%)
Frame = +2
Query: 293 NNSEINKLFTKILFFNDENKINLNKIYNNQTSFLTIILIIYLFVNLVAVVKITNIFYGPL 472
NN E+N T DE +YN T +TI+L IY+ + L+ VV I NI GPL
Sbjct: 103 NNKEMN---THEYTSEDEIMTTTTMMYNQITGMMTIMLAIYMLLTLIVVVNIINISKGPL 159
Query: 473 RSSN 484
R +N
Sbjct: 160 RHTN 163
>UniRef50_Q6IT26 Cluster: NADH dehydrogenase subunit 6; n=1;
Philaenus spumarius|Rep: NADH dehydrogenase subunit 6 -
Philaenus spumarius (Meadow spittlebug)
Length = 172
Score = 46.4 bits (105), Expect = 7e-04
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Frame = +2
Query: 293 NNSEINKLFTKILFFNDENK-IN-LNKIYNNQTSFLTIILIIYLFVNLVAVVKITNIFYG 466
NN I + + N+ NK IN + K++N T+ +T++ IIYL ++ VVK+TN+ G
Sbjct: 107 NNHMIIETMSYNKSVNEMNKEINSIMKMFNMPTTMITLMTIIYLLFTMITVVKVTNMKDG 166
Query: 467 PLRSSN 484
PLR N
Sbjct: 167 PLRMKN 172
>UniRef50_Q2TCQ6 Cluster: NADH dehydrogenase subunit 6; n=1;
Petrobius brevistylis|Rep: NADH dehydrogenase subunit 6
- Petrobius brevistylis
Length = 172
Score = 46.4 bits (105), Expect = 7e-04
Identities = 21/46 (45%), Positives = 31/46 (67%)
Frame = +2
Query: 338 NDENKINLNKIYNNQTSFLTIILIIYLFVNLVAVVKITNIFYGPLR 475
ND +++K Y+ + +TIILI+YLF+ L+ VK+T I GPLR
Sbjct: 124 NDITHDSISKFYSFEIMPITIILIMYLFLTLIVAVKVTKIHQGPLR 169
>UniRef50_A5D6K0 Cluster: NADH dehydrogenese subunit 6; n=1;
Bothropolys sp. SP-2004|Rep: NADH dehydrogenese subunit
6 - Bothropolys sp. SP-2004
Length = 154
Score = 46.4 bits (105), Expect = 7e-04
Identities = 23/40 (57%), Positives = 31/40 (77%)
Frame = +2
Query: 356 NLNKIYNNQTSFLTIILIIYLFVNLVAVVKITNIFYGPLR 475
+L+K+Y+ Q+S +TI LIIYL + L+ VVKITN GPLR
Sbjct: 114 HLSKLYS-QSSMITIFLIIYLLMTLLVVVKITNFNKGPLR 152
>UniRef50_A4UAW6 Cluster: NADH dehydrogenase subunit 6; n=3;
Polyphaga|Rep: NADH dehydrogenase subunit 6 -
Rhagophthalmus lufengensis
Length = 168
Score = 46.4 bits (105), Expect = 7e-04
Identities = 24/54 (44%), Positives = 34/54 (62%)
Frame = +2
Query: 314 LFTKILFFNDENKINLNKIYNNQTSFLTIILIIYLFVNLVAVVKITNIFYGPLR 475
+F +++N K ++NK N + L I +IIYL + L+AVVKIT I GPLR
Sbjct: 114 IFQMSIYYN--YKFSMNKFLNYPMNMLMISMIIYLLLTLIAVVKITKIKNGPLR 165
>UniRef50_Q76L70 Cluster: NADH dehydrogenase subunit 6; n=5;
Eucarida|Rep: NADH dehydrogenase subunit 6 - Euphausia
superba
Length = 173
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/42 (45%), Positives = 29/42 (69%)
Frame = +2
Query: 359 LNKIYNNQTSFLTIILIIYLFVNLVAVVKITNIFYGPLRSSN 484
++ IYN+ LTI ++ YL + L+ VVK+T F+GPLR S+
Sbjct: 131 VSTIYNSTNMNLTIFMVFYLLLTLIVVVKVTGNFFGPLRLSS 172
>UniRef50_Q5EXI2 Cluster: NADH dehydrogenase subunit 6; n=1;
Macrobrachium rosenbergii|Rep: NADH dehydrogenase
subunit 6 - Macrobrachium rosenbergii (Giant fresh water
prawn)
Length = 171
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/44 (43%), Positives = 34/44 (77%)
Frame = +2
Query: 350 KINLNKIYNNQTSFLTIILIIYLFVNLVAVVKITNIFYGPLRSS 481
+++L+ +YN T+ LT ++I+YL + L+ VVK+++ F GPLR+S
Sbjct: 128 QMSLSHMYNPTTATLTGMIILYLLLTLIVVVKLSSTFSGPLRTS 171
>UniRef50_Q7YHL6 Cluster: NADH dehydrogenase subunit 6; n=1;
Lepidopsocidae sp. RS-2001|Rep: NADH dehydrogenase
subunit 6 - Lepidopsocidae sp. RS-2001
Length = 164
Score = 44.8 bits (101), Expect = 0.002
Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
Frame = +2
Query: 338 NDENKINLN---KIYNNQTSFLTIILIIYLFVNLVAVVKITNIFYGPLRSSNK 487
ND+ NL K++N +S LTII I YLF+ ++ V KIT+ GPLRS+ K
Sbjct: 112 NDQINWNLPQSIKLFNTNSSILTIISINYLFLIMIIVTKITSSLKGPLRSNLK 164
>UniRef50_P00156 Cluster: Cytochrome b; n=22548; root|Rep:
Cytochrome b - Homo sapiens (Human)
Length = 380
Score = 44.8 bits (101), Expect = 0.002
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = +3
Query: 549 IRKTHPIFKIINNSLIDLXXXXXXXXXXXXXXLLALCLIIQIITGLFL 692
+RK +P+ K+IN+S IDL LL CLI+QI TGLFL
Sbjct: 4 MRKINPLMKLINHSFIDLPTPSNISAWWNFGSLLGACLILQITTGLFL 51
>UniRef50_Q85QQ4 Cluster: NADH dehydrogenase subunit 6; n=1;
Gomphiocephalus hodgsoni|Rep: NADH dehydrogenase subunit
6 - Gomphiocephalus hodgsoni
Length = 166
Score = 44.0 bits (99), Expect = 0.004
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 7/57 (12%)
Frame = +2
Query: 338 NDENKI-NLN------KIYNNQTSFLTIILIIYLFVNLVAVVKITNIFYGPLRSSNK 487
N NK+ NLN K+Y+N + LT + +IYL + L+ V IT+++ GP+RS+ K
Sbjct: 109 NQNNKLLNLNIKEMIFKVYSNSSVMLTSMTMIYLLLVLIVAVSITSLYEGPIRSTTK 165
>UniRef50_Q6DVK9 Cluster: NADH dehydrogenase subunit 6; n=1;
Thermobia domestica|Rep: NADH dehydrogenase subunit 6 -
Thermobia domestica (firebrat)
Length = 168
Score = 44.0 bits (99), Expect = 0.004
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = +2
Query: 365 KIYNNQTSFLTIILIIYLFVNLVAVVKITNIFYGPLRSS 481
K Y TI+L YLF+ L+AVVKIT+++ GPLR S
Sbjct: 128 KFYMTSILMNTIMLATYLFITLIAVVKITSLYQGPLRPS 166
>UniRef50_Q09GA3 Cluster: NADH dehydrogenase subunit 6; n=1;
Halocaridina rubra|Rep: NADH dehydrogenase subunit 6 -
Halocaridina rubra (Hawaiian volcano shrimp)
Length = 167
Score = 44.0 bits (99), Expect = 0.004
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +2
Query: 347 NKINLNKIYNNQTSFLTIILIIYLFVNLVAVVKITNIFYGPLR 475
N L +YN T +T+ LI+YL + LV VVKIT+ +GPLR
Sbjct: 123 NSALLCDMYNLSTMKMTLFLILYLLLTLVVVVKITSTHFGPLR 165
>UniRef50_Q53E81 Cluster: NADH dehydrogenase subunit 6; n=7;
Eumalacostraca|Rep: NADH dehydrogenase subunit 6 -
Eriocheir sinensis (Chinese mitten crab)
Length = 174
Score = 43.6 bits (98), Expect = 0.005
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +2
Query: 359 LNKIYNNQTSFLTIILIIYLFVNLVAVVKITNIFYGPLR 475
+N +YN + TI ++ YL + L+ VVKI N+F GPLR
Sbjct: 133 VNWVYNTPSMMFTIFIVSYLLLMLIVVVKIINLFKGPLR 171
>UniRef50_Q8W9D9 Cluster: Cytochrome-b protein; n=9;
Sabanejewia|Rep: Cytochrome-b protein - Sabanejewia
balcanica
Length = 81
Score = 43.2 bits (97), Expect = 0.006
Identities = 19/39 (48%), Positives = 27/39 (69%)
Frame = -1
Query: 691 KNNPVII*IIRHKASRDPIFHQEEILDGLGRSINELLMI 575
KN+PV I +I+HK S +P FH E+L+G G+S + L I
Sbjct: 43 KNSPVWIWVIKHKPSNEPKFHHTEMLEGAGKSTSASLSI 81
>UniRef50_Q5C843 Cluster: NADH dehydrogenase subunit 6; n=1;
Nesomachilis australica|Rep: NADH dehydrogenase subunit
6 - Nesomachilis australica
Length = 170
Score = 43.2 bits (97), Expect = 0.006
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = +2
Query: 359 LNKIYNNQTSFLTIILIIYLFVNLVAVVKITNIFYGPLRSS 481
L+K YN + TI+L+ YL + L+ VVKIT I GPLR S
Sbjct: 128 LSKFYNLNVAPTTILLVSYLLLTLIVVVKITQINEGPLRPS 168
>UniRef50_Q2Q1I5 Cluster: NADH dehydrogenase subunit 6; n=1;
Sclerophasma paresisense|Rep: NADH dehydrogenase subunit
6 - Sclerophasma paresisense
Length = 170
Score = 43.2 bits (97), Expect = 0.006
Identities = 18/50 (36%), Positives = 32/50 (64%)
Frame = +2
Query: 335 FNDENKINLNKIYNNQTSFLTIILIIYLFVNLVAVVKITNIFYGPLRSSN 484
+ EN + KI+N +++ +T+ ++IYL + L +V I +IF GP+R N
Sbjct: 121 YKAENIDLVIKIFNQKSAMITLTMMIYLLLTLFVIVSIMDIFKGPIRQKN 170
>UniRef50_Q8WB11 Cluster: NADH dehydrogenase subunit 6; n=1;
Crioceris duodecimpunctata|Rep: NADH dehydrogenase
subunit 6 - Crioceris duodecimpunctata (Twelve-spotted
asparagus beetle)
Length = 167
Score = 42.7 bits (96), Expect = 0.008
Identities = 22/63 (34%), Positives = 32/63 (50%)
Frame = +2
Query: 296 NSEINKLFTKILFFNDENKINLNKIYNNQTSFLTIILIIYLFVNLVAVVKITNIFYGPLR 475
N E N K ++F ++NK N + + I+ YLF+ L+ V KIT + GPLR
Sbjct: 109 NLEENLTMIKSMYFTQ----SMNKYLNYPNNIILYIMFFYLFITLIMVTKITKLKSGPLR 164
Query: 476 SSN 484
N
Sbjct: 165 QKN 167
>UniRef50_Q6DVI3 Cluster: NADH dehydrogenase subunit 6; n=1;
Parhyale hawaiiensis|Rep: NADH dehydrogenase subunit 6 -
Parhyale hawaiiensis
Length = 166
Score = 42.3 bits (95), Expect = 0.011
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Frame = +2
Query: 293 NNSEINKLFTKILFFN--DENKINLNKIYNNQTSFLTIILIIYLFVNLVAVVKITNIF 460
NN+ IN+ L N + +N+ K+Y+++ +T++LIIYL V L+ VVK +N F
Sbjct: 102 NNNYINQTTMNCLSMNLMELAPLNIYKVYSSEIYPMTLVLIIYLLVALIVVVKNSNFF 159
>UniRef50_Q5FYG1 Cluster: NADH dehydrogenase subunit 6; n=1;
Homalodisca coagulata|Rep: NADH dehydrogenase subunit 6
- Homalodisca coagulata (Glassy-winged sharpshooter)
Length = 163
Score = 42.3 bits (95), Expect = 0.011
Identities = 15/46 (32%), Positives = 31/46 (67%)
Frame = +2
Query: 338 NDENKINLNKIYNNQTSFLTIILIIYLFVNLVAVVKITNIFYGPLR 475
N KI++ K+YN ++ +T+I++++L + +++ KI + GPLR
Sbjct: 113 NPMEKISMIKLYNEKSMIITMIMVMFLLLTMISTTKIVKLHEGPLR 158
>UniRef50_Q35127 Cluster: Cytochrome b; n=7; Fungi/Metazoa
group|Rep: Cytochrome b - Neurospora crassa
Length = 448
Score = 42.3 bits (95), Expect = 0.011
Identities = 20/46 (43%), Positives = 27/46 (58%)
Frame = +3
Query: 555 KTHPIFKIINNSLIDLXXXXXXXXXXXXXXLLALCLIIQIITGLFL 692
K+HP+ K++N+ LID LLA CLIIQI+TG+ L
Sbjct: 5 KSHPLLKLVNSYLIDASQPSNISYLWNFGSLLACCLIIQIVTGVTL 50
>UniRef50_Q0H8X2 Cluster: Probable intron-encoded endonuclease bI1
precursor [Contains: Truncated non-functional cytochrome
b; Intron-encoded endonuclease bI1 (EC 3.1.-.-)]; n=2;
Ustilago maydis|Rep: Probable intron-encoded
endonuclease bI1 precursor [Contains: Truncated
non-functional cytochrome b; Intron-encoded endonuclease
bI1 (EC 3.1.-.-)] - Ustilago maydis (Smut fungus)
Length = 410
Score = 41.9 bits (94), Expect = 0.014
Identities = 21/46 (45%), Positives = 26/46 (56%)
Frame = +3
Query: 555 KTHPIFKIINNSLIDLXXXXXXXXXXXXXXLLALCLIIQIITGLFL 692
KTHPI + N+ LID LL +CLIIQI+TG+FL
Sbjct: 5 KTHPILGLANSYLIDSPQPSNISYMWNFGSLLGVCLIIQILTGVFL 50
>UniRef50_Q6BDS5 Cluster: NADH dehydrogenase subunit 6; n=1;
Orthetrum triangulare melania|Rep: NADH dehydrogenase
subunit 6 - Orthetrum triangulare melania
Length = 165
Score = 41.5 bits (93), Expect = 0.019
Identities = 14/43 (32%), Positives = 28/43 (65%)
Frame = +2
Query: 341 DENKINLNKIYNNQTSFLTIILIIYLFVNLVAVVKITNIFYGP 469
D + + ++ +YNN S +T+ +++YLF+ L+ +V +T GP
Sbjct: 120 DSSNMIMSPLYNNPISVITVFMVLYLFLTLIVIVSLTKFNKGP 162
>UniRef50_P03880 Cluster: Intron-encoded DNA endonuclease I-AniI
precursor (mRNA maturase bI1) (COB intron protein)
[Contains: Truncated non-functional cytochrome b; DNA
endonuclease/RNA maturase I-AniI (EC 3.1.-.-)]; n=23;
Fungi/Metazoa group|Rep: Intron-encoded DNA endonuclease
I-AniI precursor (mRNA maturase bI1) (COB intron
protein) [Contains: Truncated non-functional cytochrome
b; DNA endonuclease/RNA maturase I-AniI (EC 3.1.-.-)] -
Emericella nidulans (Aspergillus nidulans)
Length = 488
Score = 41.5 bits (93), Expect = 0.019
Identities = 21/48 (43%), Positives = 28/48 (58%)
Frame = +3
Query: 549 IRKTHPIFKIINNSLIDLXXXXXXXXXXXXXXLLALCLIIQIITGLFL 692
I K+HP+ KI+N+ +ID LLALCL IQI+TG+ L
Sbjct: 3 ILKSHPLLKIVNSYIIDSPQPANLSYLWNFGSLLALCLGIQIVTGVTL 50
>UniRef50_Q8SHP6 Cluster: Apocytochrome B; n=1; Hypocrea
jecorina|Rep: Apocytochrome B - Trichoderma reesei
(Hypocrea jecorina)
Length = 427
Score = 41.1 bits (92), Expect = 0.025
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +3
Query: 549 IRKTHPIFKIINNSLIDLXXXXXXXXXXXXXXLLALCLIIQIITGLFL 692
I K+HP+ K++N +ID LLA+CLIIQI+TG+ L
Sbjct: 3 ILKSHPLLKLVNMYIIDHSQPSNISYLWNFGSLLAVCLIIQIVTGVTL 50
>UniRef50_Q70XS0 Cluster: NADH dehydrogenase subunit 6; n=1;
Scutigera coleoptrata|Rep: NADH dehydrogenase subunit 6
- Scutigera coleoptrata (House centipede)
Length = 167
Score = 40.7 bits (91), Expect = 0.033
Identities = 21/41 (51%), Positives = 28/41 (68%)
Frame = +2
Query: 359 LNKIYNNQTSFLTIILIIYLFVNLVAVVKITNIFYGPLRSS 481
+NK Y + +T+++I+YL V L AVVKIT GPLRSS
Sbjct: 127 INKFYLHNYP-ITLLVILYLLVTLFAVVKITKFNKGPLRSS 166
>UniRef50_Q3LRC4 Cluster: NADH dehydrogenase subunit 6; n=5;
Unipeltata|Rep: NADH dehydrogenase subunit 6 -
Gonodactylus chiragra
Length = 174
Score = 40.7 bits (91), Expect = 0.033
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +2
Query: 359 LNKIYNNQTSFLTIILIIYLFVNLVAVVKITNIFYGPLR 475
+ IY+ T T+ +I+YL + L+ VVKIT F GPLR
Sbjct: 132 IGNIYSLNTMNTTLFMILYLLLTLIVVVKITYTFLGPLR 170
>UniRef50_O47500 Cluster: RT-like protein; n=1; Venturia
inaequalis|Rep: RT-like protein - Venturia inaequalis
(Apple scab fungus)
Length = 760
Score = 39.5 bits (88), Expect = 0.076
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = +3
Query: 549 IRKTHPIFKIINNSLIDLXXXXXXXXXXXXXXLLALCLIIQIITGLFL 692
I K+HP+ ++ N+ +ID LLA CL+IQIITG+ L
Sbjct: 3 ILKSHPLLRLANSYIIDSPQPSNISYLWNFGSLLAFCLVIQIITGVTL 50
>UniRef50_Q2F1S9 Cluster: NADH dehydrogenase subunit 6; n=13;
Daphnia|Rep: NADH dehydrogenase subunit 6 - Daphnia
pulex (Water flea)
Length = 170
Score = 38.7 bits (86), Expect = 0.13
Identities = 21/61 (34%), Positives = 36/61 (59%)
Frame = +2
Query: 296 NSEINKLFTKILFFNDENKINLNKIYNNQTSFLTIILIIYLFVNLVAVVKITNIFYGPLR 475
+S+ N L K+ +N+E+ LN +Y+ Q +TI L++YL + L+ VV I+ LR
Sbjct: 110 DSKTNALL-KMTHYNNESTDWLNLLYSEQLGGMTIFLVLYLLLTLIVVVAISKNDSSSLR 168
Query: 476 S 478
+
Sbjct: 169 A 169
>UniRef50_Q8M2C1 Cluster: NADH dehydrogenase subunit 6; n=1;
Pyrocoelia rufa|Rep: NADH dehydrogenase subunit 6 -
Pyrocoelia rufa (Firefly)
Length = 168
Score = 37.9 bits (84), Expect = 0.23
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +2
Query: 329 LFFNDEN-KINLNKIYNNQTSFLTIILIIYLFVNLVAVVKITNIFYGPLRSSN 484
+F EN + L K + + ++LIIYL + ++A VKIT I +GPLR N
Sbjct: 116 MFQTQENFSMILLKYLSFPMMLMWLMLIIYLLITMIAAVKITVIKHGPLRQIN 168
>UniRef50_Q6SKZ5 Cluster: NADH dehydrogenase subunit 6; n=1;
Hutchinsoniella macracantha|Rep: NADH dehydrogenase
subunit 6 - Hutchinsoniella macracantha
Length = 171
Score = 37.9 bits (84), Expect = 0.23
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +2
Query: 332 FFNDENKINLNKIYNNQTSFLTIILIIYLFVNLVAVVKITNIFYGPLRSS 481
F+N+E + K Y+ FL++ LI YLF LV VV + + GP+R S
Sbjct: 120 FYNNEIGYIIYKFYSLMLGFLSVSLIFYLFFVLVVVVFTSVVKCGPIRLS 169
>UniRef50_A7E1Q4 Cluster: NADH dehydrogenase subunit 6; n=1; Achelia
bituberculata|Rep: NADH dehydrogenase subunit 6 -
Achelia bituberculata
Length = 163
Score = 37.5 bits (83), Expect = 0.31
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +2
Query: 290 ENN--SEINKLFTKILFFNDENKINLNKIYNNQTSFLTIILIIYLFVNLVAVVKITNIFY 463
ENN S+I +LF+ + N+ Y+ T+ L +YL + L +VK++N+
Sbjct: 101 ENNLISQIFNFNKNLLFYQSDYVTNM---YSFSMMLSTLFLALYLMITLFIIVKMSNMNK 157
Query: 464 GPLRS 478
GPLRS
Sbjct: 158 GPLRS 162
>UniRef50_Q952F0 Cluster: NADH dehydrogenase subunit 6; n=1;
Phascolopsis gouldii|Rep: NADH dehydrogenase subunit 6 -
Phascolopsis gouldii (Golfingia gouldii)
Length = 157
Score = 37.1 bits (82), Expect = 0.41
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +2
Query: 359 LNKIYNNQTSFLTIILIIYLFVNLVAVVKITNIFYGPLR 475
+ K++ S + + L I LF+ L+AVVK+ + YGPLR
Sbjct: 116 ITKLFTFPHSLMLLTLAIILFIALIAVVKVASRHYGPLR 154
>UniRef50_Q94R70 Cluster: NADH dehydrogenase subunit 6; n=1;
Tribolium castaneum|Rep: NADH dehydrogenase subunit 6 -
Tribolium castaneum (Red flour beetle)
Length = 164
Score = 36.7 bits (81), Expect = 0.54
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 350 KINLNKIYNNQTSFLTIILIIYLFVNLVAVVKITNIFYGPLRSSN 484
+ +L K N + I +I+YL + L+A VKIT GP+R N
Sbjct: 120 QFSLIKYANFPVMIILISMILYLLITLIATVKITEFKQGPIRQMN 164
>UniRef50_P03879 Cluster: Intron-encoded RNA maturase bI4 precursor
(RNA maturase SCbI4) [Contains: Truncated, nonfunctional
cytochrome b; RNA maturase bI4 (EC 3.1.-.-)]; n=18;
Fungi/Metazoa group|Rep: Intron-encoded RNA maturase bI4
precursor (RNA maturase SCbI4) [Contains: Truncated,
nonfunctional cytochrome b; RNA maturase bI4 (EC
3.1.-.-)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 638
Score = 36.7 bits (81), Expect = 0.54
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +3
Query: 546 SIRKTHPIFKIINNSLIDLXXXXXXXXXXXXXXLLALCLIIQIITGLFL 692
+ RK++ ++N+ +ID LL LCL+IQI+TG+F+
Sbjct: 2 AFRKSNVYLSLVNSYIIDSPQPSSINYWWNMGSLLGLCLVIQIVTGIFM 50
>UniRef50_Q9ZZW7 Cluster: Cytochrome b mRNA maturase bI3; n=1;
Saccharomyces cerevisiae|Rep: Cytochrome b mRNA maturase
bI3 - Saccharomyces cerevisiae (Baker's yeast)
Length = 517
Score = 36.7 bits (81), Expect = 0.54
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +3
Query: 546 SIRKTHPIFKIINNSLIDLXXXXXXXXXXXXXXLLALCLIIQIITGLFL 692
+ RK++ ++N+ +ID LL LCL+IQI+TG+F+
Sbjct: 2 AFRKSNVYLSLVNSYIIDSPQPSSINYWWNMGSLLGLCLVIQIVTGIFM 50
>UniRef50_P03873 Cluster: Cytochrome b mRNA maturase bI2; n=4;
Saccharomycetales|Rep: Cytochrome b mRNA maturase bI2 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 423
Score = 36.7 bits (81), Expect = 0.54
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +3
Query: 546 SIRKTHPIFKIINNSLIDLXXXXXXXXXXXXXXLLALCLIIQIITGLFL 692
+ RK++ ++N+ +ID LL LCL+IQI+TG+F+
Sbjct: 2 AFRKSNVYLSLVNSYIIDSPQPSSINYWWNMGSLLGLCLVIQIVTGIFM 50
>UniRef50_Q00228 Cluster: Cytochrome b; n=19; Mytilus|Rep:
Cytochrome b - Mytilus edulis (Blue mussel)
Length = 397
Score = 36.7 bits (81), Expect = 0.54
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +3
Query: 552 RKTHPIFKIINNSLIDLXXXXXXXXXXXXXXLLALCLIIQIITGLFL 692
R T+ + KI+N+S DL +L LCL+IQ+++GL L
Sbjct: 20 RSTNKLVKIMNDSFYDLPCPVNLNAWWSFGSMLGLCLVIQLLSGLLL 66
>UniRef50_Q0QJ89 Cluster: NADH dehydrogenase subunit 6; n=1; Xenos
vesparum|Rep: NADH dehydrogenase subunit 6 - Xenos
vesparum
Length = 163
Score = 36.3 bits (80), Expect = 0.71
Identities = 17/65 (26%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +2
Query: 296 NSEINKLFTKILFFNDENK--INLNKIYNNQTSFLTIILIIYLFVNLVAVVKITNIFYGP 469
N +N + +++ +N +NKIY N + I +++ LF+ ++ + K+ N+ GP
Sbjct: 96 NFYVNSMESQMFIKTSQNLEIYEINKIYMNNKYMILIYMLLLLFLIMMFINKLVNLKMGP 155
Query: 470 LRSSN 484
+R N
Sbjct: 156 IRKIN 160
>UniRef50_A3QU18 Cluster: NADH dehydrogenase subunit 6; n=1;
Epiperipatus biolleyi|Rep: NADH dehydrogenase subunit 6
- Epiperipatus biolleyi
Length = 168
Score = 36.3 bits (80), Expect = 0.71
Identities = 18/59 (30%), Positives = 33/59 (55%)
Frame = +2
Query: 308 NKLFTKILFFNDENKINLNKIYNNQTSFLTIILIIYLFVNLVAVVKITNIFYGPLRSSN 484
+ L + F++EN + ++ +TI L YL + L++VVKI ++ GP+R+ N
Sbjct: 111 DSLQESLQIFSNENN-SYTSFFSKPVGKITIFLASYLLLCLISVVKICHLIEGPIRTLN 168
>UniRef50_Q8HCU2 Cluster: NADH dehydrogenase subunit 6; n=2;
Triops|Rep: NADH dehydrogenase subunit 6 - Triops
cancriformis (Tadpole shrimp)
Length = 166
Score = 35.5 bits (78), Expect = 1.2
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2
Query: 359 LNKIYNNQTSFLTIILIIYLFVNLVAVVKITNIFYGPLR 475
++ +Y N L + ++ YL V L+ VV IT + GPLR
Sbjct: 125 VSHVYKNSNIQLMLFMVTYLLVTLLVVVNITKLDVGPLR 163
>UniRef50_A0MCU1 Cluster: NADH dehydrogenase subunit 6; n=1;
Priapulus caudatus|Rep: NADH dehydrogenase subunit 6 -
Priapulus caudatus
Length = 174
Score = 35.1 bits (77), Expect = 1.6
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +2
Query: 371 YNNQTSFLTIILIIYLFVNLVAVVKITNIFYGPLR 475
Y+ + I+++ YL + L+AVVKI+ + +GPLR
Sbjct: 125 YSLNSVIFVILIMTYLLITLMAVVKISQLGFGPLR 159
>UniRef50_Q6SL31 Cluster: NADH dehydrogenase subunit 6; n=1; Argulus
americanus|Rep: NADH dehydrogenase subunit 6 - Argulus
americanus
Length = 149
Score = 33.5 bits (73), Expect = 5.0
Identities = 17/54 (31%), Positives = 31/54 (57%)
Frame = +2
Query: 317 FTKILFFNDENKINLNKIYNNQTSFLTIILIIYLFVNLVAVVKITNIFYGPLRS 478
+ ++FF++ + ++++N S L ++L YLF+ LV + IT G LRS
Sbjct: 96 YNHLIFFSESYYVT-SEMFNKNNSLLILMLTCYLFIGLVVMSFITLKKEGALRS 148
>UniRef50_P34857 Cluster: NADH-ubiquinone oxidoreductase chain 6;
n=1; Apis mellifera ligustica|Rep: NADH-ubiquinone
oxidoreductase chain 6 - Apis mellifera ligustica
(Common honeybee)
Length = 167
Score = 33.5 bits (73), Expect = 5.0
Identities = 20/56 (35%), Positives = 28/56 (50%)
Frame = +2
Query: 308 NKLFTKILFFNDENKINLNKIYNNQTSFLTIILIIYLFVNLVAVVKITNIFYGPLR 475
NKL +FN I+L +Y S L I+I+ L + L+ + KIT I LR
Sbjct: 109 NKLSQNEHYFNYFKNIDLMYLYMKMNSTLFFIMILMLIITLILMTKITYIEKKTLR 164
>UniRef50_Q6KHY8 Cluster: Putative uncharacterized protein; n=1;
Mycoplasma mobile|Rep: Putative uncharacterized protein
- Mycoplasma mobile
Length = 469
Score = 33.1 bits (72), Expect = 6.6
Identities = 14/38 (36%), Positives = 26/38 (68%)
Frame = +2
Query: 335 FNDENKINLNKIYNNQTSFLTIILIIYLFVNLVAVVKI 448
FN +N +N N+I+ + T++L +IL I L + +A V++
Sbjct: 284 FNTQNVVNFNQIFGSFTTWLFLILNIILVLIFIAYVRL 321
>UniRef50_Q8WA85 Cluster: NADH dehydrogenase subunit 6; n=1;
Thyropygus sp. DVL-2001|Rep: NADH dehydrogenase subunit
6 - Thyropygus sp. DVL-2001
Length = 153
Score = 33.1 bits (72), Expect = 6.6
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +2
Query: 365 KIYNNQTSFLTIILIIYLFVNLVAVVKITNIFYGPLR 475
KI++ +T+ + +YLF+ L+ + KIT GPLR
Sbjct: 114 KIFSMSLLLMTLFMALYLFLTLLIISKITMFKEGPLR 150
>UniRef50_Q76F81 Cluster: Cytochrome b protein; n=12; Coelomata|Rep:
Cytochrome b protein - Ornithodoros porcinus
Length = 365
Score = 33.1 bits (72), Expect = 6.6
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +3
Query: 573 KIINNSLIDLXXXXXXXXXXXXXXLLALCLIIQIITGLFL 692
KI+N+++IDL LL CL IQI TG+FL
Sbjct: 9 KIVNDTMIDLPAPSNISYMWNMGSLLFSCLAIQISTGIFL 48
>UniRef50_P42792 Cluster: Cytochrome b; n=6041; root|Rep: Cytochrome
b - Arabidopsis thaliana (Mouse-ear cress)
Length = 393
Score = 33.1 bits (72), Expect = 6.6
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +3
Query: 564 PIFKIINNSLIDLXXXXXXXXXXXXXXLLALCLIIQIITGLFL 692
PI +N L+D L +CL+IQI+TG+FL
Sbjct: 14 PISSTLNQHLVDYPTPSNLSYWWGFGPLAGICLVIQIVTGVFL 56
>UniRef50_Q5FID5 Cluster: Polysaccharide polymerase; n=1;
Lactobacillus acidophilus|Rep: Polysaccharide polymerase
- Lactobacillus acidophilus
Length = 431
Score = 32.7 bits (71), Expect = 8.8
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Frame = +2
Query: 305 INKLFTKILF-FNDENKINLNKIY-NNQTSFLT----IILIIYLFVNLVAVVKITNIF 460
+NKL + + F + + K LN Y + + S++ ++LIIY+ NL V KI NIF
Sbjct: 74 VNKLLSVVKFQYKNSKKSKLNAPYISTRKSYILFAIQLLLIIYVIRNLKEVTKINNIF 131
>UniRef50_Q55CB6 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1362
Score = 32.7 bits (71), Expect = 8.8
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +2
Query: 302 EINKLFTKILFFNDENKINLNKIYNNQTSFLTIILIIYLFVNLVAVVKITNI 457
+ NKL ILF N N + + NN F II I+ + L+ V K+ +
Sbjct: 219 DFNKLTLSILFLNQANYLIKLLLSNNPNEFNEIIEIVISSIGLIGVEKVKRV 270
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 285,376,381
Number of Sequences: 1657284
Number of extensions: 3172148
Number of successful extensions: 11211
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 10529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11192
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54545459628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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