Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0636
         (685 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A4B7H4 Cluster: Putative uncharacterized protein; n=1; ...    34   2.8  
UniRef50_Q2SR39 Cluster: Alkylphosphonate ABC transporter, perme...    33   8.6  
UniRef50_Q54N62 Cluster: Putative uncharacterized protein; n=2; ...    33   8.6  

>UniRef50_A4B7H4 Cluster: Putative uncharacterized protein; n=1;
           Alteromonas macleodii 'Deep ecotype'|Rep: Putative
           uncharacterized protein - Alteromonas macleodii 'Deep
           ecotype'
          Length = 170

 Score = 34.3 bits (75), Expect = 2.8
 Identities = 15/45 (33%), Positives = 27/45 (60%)
 Frame = -2

Query: 615 RHHNRDLSSN*PIICRNLVILTDFLQRNICRQ*TRCY*LRIINNI 481
           RH N+  +S    + RNLV++TD L++N+  +    Y  R+I+ +
Sbjct: 33  RHSNKQTNSKVTYVYRNLVLVTDALEKNLTSRIESAYKSRLIDQV 77


>UniRef50_Q2SR39 Cluster: Alkylphosphonate ABC transporter, permease
           protein; n=2; Mycoplasma|Rep: Alkylphosphonate ABC
           transporter, permease protein - Mycoplasma capricolum
           subsp. capricolum (strain California kid / ATCC27343 /
           NCTC 10154)
          Length = 911

 Score = 32.7 bits (71), Expect = 8.6
 Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
 Frame = -1

Query: 565 LSNTYRFPSAKYLSSINP-LLLASYYK*YL-RYIIFNAILFSFVFLFSQ---NMT*TSLV 401
           + NT +  + K+  ++ P L+L    K Y+ R I F  ILF F+FL      +++ +S +
Sbjct: 414 VENTIKTETEKFKETLTPELVLKKMPKTYIKRTIFFTIILFLFIFLIKDINFSLSSSSSI 473

Query: 400 KN*IDESKNEYLKTLLLISHEIFFFMNQL 314
           KN      N+ +  +L I+ E  ++ N L
Sbjct: 474 KN-----TNQRILDILNINWESLYYANPL 497


>UniRef50_Q54N62 Cluster: Putative uncharacterized protein; n=2;
            Dictyostelium discoideum AX4|Rep: Putative
            uncharacterized protein - Dictyostelium discoideum AX4
          Length = 2847

 Score = 32.7 bits (71), Expect = 8.6
 Identities = 26/112 (23%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
 Frame = +3

Query: 201  KKLENDSMLFLVN*NIYF-EMVTIVFVVLSILDELTCAYS*FIKKNISCDIKSKVFKYSF 377
            KK+++ ++L LV+ +I F    +I+ + +S+L  ++      +K       K K++ +  
Sbjct: 1279 KKIKDQTLL-LVDFSILFGSWQSIIQIFISVLVIISAMVFLILKYQFYSKGKLKLWSFII 1337

Query: 378  LDSSI*FFTKEVYVIF*ENKKTNENKIALNIMYRKYYL*YEASSNGFIDDKY 533
            +  S+ F    +  IF +N+    + I + I+Y   Y   + + NG I + Y
Sbjct: 1338 ILRSVLFSILSITSIFSDNEFYMPSIILIQIVYSSIYFYGDLNGNGTISNPY 1389


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 563,617,417
Number of Sequences: 1657284
Number of extensions: 10029315
Number of successful extensions: 19006
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18994
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53305790091
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)