Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0636
         (685 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1673 - 28532923-28533009,28533058-28533117,28533664-285337...    28   7.9  

>07_03_1673 -
           28532923-28533009,28533058-28533117,28533664-28533732,
           28534757-28534862,28535058-28535203,28535805-28536017,
           28536523-28536546,28536647-28536704,28536739-28537022,
           28538890-28539063,28539427-28539825
          Length = 539

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = -3

Query: 152 FSIIYLL-QMCNCACSF*LQNIFNTNY*PRI*SAISISLKFQRLF 21
           FS++Y+L Q+  CAC+F +  +    Y PR      I  K ++ F
Sbjct: 351 FSLLYVLFQVVTCACAFGIWFLDGGTYMPRHLHKEDICFKMEKAF 395


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,662,511
Number of Sequences: 37544
Number of extensions: 221508
Number of successful extensions: 359
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 359
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1733104716
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)