BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0636 (685 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z93024-4|CAI18792.1| 2253|Homo sapiens polycystic kidney disease... 30 6.7 EF517278-1|ABR22603.1| 2255|Homo sapiens PKDREJ protein. 30 6.7 AL078611-3|CAI18766.1| 2253|Homo sapiens polycystic kidney disea... 30 6.7 AL031034-1|CAI18795.1| 2253|Homo sapiens polycystic kidney disea... 30 6.7 AF116458-1|AAD18021.1| 2253|Homo sapiens polycystic kidney disea... 30 6.7 >Z93024-4|CAI18792.1| 2253|Homo sapiens polycystic kidney disease (polycystin) and REJ homolog (sperm receptor for egg protein. Length = 2253 Score = 30.3 bits (65), Expect = 6.7 Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Frame = +3 Query: 192 KRKKKLENDSMLFLVN*NIYFEMVTIVFVVLSILDELTC-AYS*FIKKNISCDI 350 KRKK+++ ++LFL +F + ++ +++ +L C Y+ FI+ S D+ Sbjct: 1698 KRKKRIKRRALLFLSYILTHFIFLALLLILIVLLRHTDCFYYNQFIRDRFSMDL 1751 >EF517278-1|ABR22603.1| 2255|Homo sapiens PKDREJ protein. Length = 2255 Score = 30.3 bits (65), Expect = 6.7 Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Frame = +3 Query: 192 KRKKKLENDSMLFLVN*NIYFEMVTIVFVVLSILDELTC-AYS*FIKKNISCDI 350 KRKK+++ ++LFL +F + ++ +++ +L C Y+ FI+ S D+ Sbjct: 1700 KRKKRIKRRALLFLSYILTHFIFLALLLILIVLLRHTDCFYYNQFIRDRFSMDL 1753 >AL078611-3|CAI18766.1| 2253|Homo sapiens polycystic kidney disease (polycystin) and REJ homolog (sperm receptor for egg protein. Length = 2253 Score = 30.3 bits (65), Expect = 6.7 Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Frame = +3 Query: 192 KRKKKLENDSMLFLVN*NIYFEMVTIVFVVLSILDELTC-AYS*FIKKNISCDI 350 KRKK+++ ++LFL +F + ++ +++ +L C Y+ FI+ S D+ Sbjct: 1698 KRKKRIKRRALLFLSYILTHFIFLALLLILIVLLRHTDCFYYNQFIRDRFSMDL 1751 >AL031034-1|CAI18795.1| 2253|Homo sapiens polycystic kidney disease (polycystin) and REJ homolog (sperm receptor for egg protein. Length = 2253 Score = 30.3 bits (65), Expect = 6.7 Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Frame = +3 Query: 192 KRKKKLENDSMLFLVN*NIYFEMVTIVFVVLSILDELTC-AYS*FIKKNISCDI 350 KRKK+++ ++LFL +F + ++ +++ +L C Y+ FI+ S D+ Sbjct: 1698 KRKKRIKRRALLFLSYILTHFIFLALLLILIVLLRHTDCFYYNQFIRDRFSMDL 1751 >AF116458-1|AAD18021.1| 2253|Homo sapiens polycystic kidney disease and receptor for egg jelly related protein protein. Length = 2253 Score = 30.3 bits (65), Expect = 6.7 Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Frame = +3 Query: 192 KRKKKLENDSMLFLVN*NIYFEMVTIVFVVLSILDELTC-AYS*FIKKNISCDI 350 KRKK+++ ++LFL +F + ++ +++ +L C Y+ FI+ S D+ Sbjct: 1698 KRKKRIKRRALLFLSYILTHFIFLALLLILIVLLRHTDCFYYNQFIRDRFSMDL 1751 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 77,535,270 Number of Sequences: 237096 Number of extensions: 1357000 Number of successful extensions: 1411 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 1393 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1410 length of database: 76,859,062 effective HSP length: 88 effective length of database: 55,994,614 effective search space used: 7783251346 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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