Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0636
         (685 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93024-4|CAI18792.1| 2253|Homo sapiens polycystic kidney disease...    30   6.7  
EF517278-1|ABR22603.1| 2255|Homo sapiens PKDREJ protein.               30   6.7  
AL078611-3|CAI18766.1| 2253|Homo sapiens polycystic kidney disea...    30   6.7  
AL031034-1|CAI18795.1| 2253|Homo sapiens polycystic kidney disea...    30   6.7  
AF116458-1|AAD18021.1| 2253|Homo sapiens polycystic kidney disea...    30   6.7  

>Z93024-4|CAI18792.1| 2253|Homo sapiens polycystic kidney disease
            (polycystin) and REJ homolog (sperm receptor for egg
            protein.
          Length = 2253

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
 Frame = +3

Query: 192  KRKKKLENDSMLFLVN*NIYFEMVTIVFVVLSILDELTC-AYS*FIKKNISCDI 350
            KRKK+++  ++LFL     +F  + ++ +++ +L    C  Y+ FI+   S D+
Sbjct: 1698 KRKKRIKRRALLFLSYILTHFIFLALLLILIVLLRHTDCFYYNQFIRDRFSMDL 1751


>EF517278-1|ABR22603.1| 2255|Homo sapiens PKDREJ protein.
          Length = 2255

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
 Frame = +3

Query: 192  KRKKKLENDSMLFLVN*NIYFEMVTIVFVVLSILDELTC-AYS*FIKKNISCDI 350
            KRKK+++  ++LFL     +F  + ++ +++ +L    C  Y+ FI+   S D+
Sbjct: 1700 KRKKRIKRRALLFLSYILTHFIFLALLLILIVLLRHTDCFYYNQFIRDRFSMDL 1753


>AL078611-3|CAI18766.1| 2253|Homo sapiens polycystic kidney disease
            (polycystin) and REJ homolog (sperm receptor for egg
            protein.
          Length = 2253

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
 Frame = +3

Query: 192  KRKKKLENDSMLFLVN*NIYFEMVTIVFVVLSILDELTC-AYS*FIKKNISCDI 350
            KRKK+++  ++LFL     +F  + ++ +++ +L    C  Y+ FI+   S D+
Sbjct: 1698 KRKKRIKRRALLFLSYILTHFIFLALLLILIVLLRHTDCFYYNQFIRDRFSMDL 1751


>AL031034-1|CAI18795.1| 2253|Homo sapiens polycystic kidney disease
            (polycystin) and REJ homolog (sperm receptor for egg
            protein.
          Length = 2253

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
 Frame = +3

Query: 192  KRKKKLENDSMLFLVN*NIYFEMVTIVFVVLSILDELTC-AYS*FIKKNISCDI 350
            KRKK+++  ++LFL     +F  + ++ +++ +L    C  Y+ FI+   S D+
Sbjct: 1698 KRKKRIKRRALLFLSYILTHFIFLALLLILIVLLRHTDCFYYNQFIRDRFSMDL 1751


>AF116458-1|AAD18021.1| 2253|Homo sapiens polycystic kidney disease
            and receptor for egg jelly related protein protein.
          Length = 2253

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
 Frame = +3

Query: 192  KRKKKLENDSMLFLVN*NIYFEMVTIVFVVLSILDELTC-AYS*FIKKNISCDI 350
            KRKK+++  ++LFL     +F  + ++ +++ +L    C  Y+ FI+   S D+
Sbjct: 1698 KRKKRIKRRALLFLSYILTHFIFLALLLILIVLLRHTDCFYYNQFIRDRFSMDL 1751


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,535,270
Number of Sequences: 237096
Number of extensions: 1357000
Number of successful extensions: 1411
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1410
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)