Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0635
(743 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_22249| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_31427| Best HMM Match : Tetraspannin (HMM E-Value=0) 44 2e-04
SB_1751| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_46721| Best HMM Match : Tetraspannin (HMM E-Value=4e-35) 43 2e-04
SB_31429| Best HMM Match : Tetraspannin (HMM E-Value=5.9e-35) 40 0.003
SB_31428| Best HMM Match : Tetraspannin (HMM E-Value=0) 39 0.004
SB_32096| Best HMM Match : Tetraspannin (HMM E-Value=1.1e-13) 38 0.009
SB_54678| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.046
SB_15887| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.061
SB_22250| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.080
SB_58139| Best HMM Match : Tetraspannin (HMM E-Value=0.2) 35 0.080
SB_23554| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_48551| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.75
SB_31268| Best HMM Match : zf-C2H2 (HMM E-Value=5.04467e-44) 31 0.75
SB_41644| Best HMM Match : Tetraspannin (HMM E-Value=0) 31 0.99
SB_26670| Best HMM Match : Tetraspannin (HMM E-Value=1.09301e-43) 31 1.3
SB_23414| Best HMM Match : Tetraspannin (HMM E-Value=3.8e-08) 30 1.7
SB_43276| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 4.0
SB_36075| Best HMM Match : CCD (HMM E-Value=4.3) 29 4.0
SB_3588| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_20511| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_9942| Best HMM Match : CCD (HMM E-Value=4.3) 29 4.0
SB_48437| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_30622| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-14) 28 9.2
SB_28072| Best HMM Match : VWA (HMM E-Value=0) 28 9.2
>SB_22249| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 296
Score = 44.8 bits (101), Expect = 7e-05
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = +3
Query: 3 DSVMRNLNASITQY--PVDKNVQKTIDIIQTDLQCCGINSPADWADHGLPIPSTCCSAQE 176
D V+ L + Y P +N Q ID +QT+L+CCG+NS DW + I C S
Sbjct: 137 DKVVEKLKDDLKHYRDPDKENFQFLIDRLQTNLKCCGVNSYTDWQTN---IYFNCSSPGS 193
Query: 177 INDGVVAACTENS 215
+ GV +C + S
Sbjct: 194 ESCGVPFSCCKES 206
>SB_31427| Best HMM Match : Tetraspannin (HMM E-Value=0)
Length = 299
Score = 43.6 bits (98), Expect = 2e-04
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = +3
Query: 3 DSVMRNLNASITQY--PVDKNVQKTIDIIQTDLQCCGINSPADWADHGLPIPSTCCSAQE 176
D V+ L + Y P +N Q ID +QT+L+CCGINS DW + + C S
Sbjct: 137 DKVVAKLKDDLQHYRDPDKENFQFLIDRLQTNLKCCGINSYNDWQTN---VYFNCSSPGS 193
Query: 177 INDGVVAACTENS 215
+ GV +C + S
Sbjct: 194 ESCGVPFSCCKES 206
>SB_1751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 341
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/82 (28%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Frame = +3
Query: 15 RNLNASITQYPVDKNVQKTIDIIQTDLQCCGINSPADWAD-----HGLPIPSTCCSAQEI 179
+++ +I YP KN +K+I+ +QT +CCG ++ DW + +P +CC +++
Sbjct: 117 KDILKAIENYP-GKN-EKSINDMQTKFKCCGADNYTDWQSNIKMKNSSSVPDSCCKSEKA 174
Query: 180 NDGVVAACTENSTNFHSKGCLT 245
GV ++ + ++KGC T
Sbjct: 175 GCGV--GGVKDPKDIYTKGCFT 194
Score = 37.5 bits (83), Expect = 0.011
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Frame = +3
Query: 3 DSVMRNLNASITQYPVDKNVQKTIDIIQTDLQCCGINSPADW--ADH-GLP--IPSTCCS 167
D + L I Y + + +D +Q ++CCGI + DW +D+ GL +P +CC+
Sbjct: 221 DELENELKNQIKSYT--GSARNAVDDMQKTVKCCGITTYEDWKSSDNLGLTDNVPDSCCT 278
Query: 168 AQEINDGVVAACTENSTNFHSKGCLTKL 251
E + G+ + T + +GC K+
Sbjct: 279 TVEKDCGM--GQRKTPTRIYKEGCYMKI 304
>SB_46721| Best HMM Match : Tetraspannin (HMM E-Value=4e-35)
Length = 642
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Frame = +3
Query: 3 DSVMRNLNASITQYPVDKNVQKTIDIIQTDLQCCGINSPADWADHG----LPIPSTCCSA 170
D ++RN I +YP KN + ID +Q D +CCG P+DW +G P +CC
Sbjct: 470 DDIIRN----IKEYP--KNNKAAIDAMQMDFECCGAKGPSDWTFYGQMKYKAGPGSCCGK 523
Query: 171 QEINDGVVAACTENS 215
ND + T NS
Sbjct: 524 PN-NDACLPG-TRNS 536
>SB_31429| Best HMM Match : Tetraspannin (HMM E-Value=5.9e-35)
Length = 286
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Frame = +3
Query: 21 LNASITQYPVDKNVQKTIDIIQTDLQCCGINSPADWADH-----GLPIPSTC 161
L + Y D + Q+ ID IQT +CCGI S DW + P+P+ C
Sbjct: 137 LEDGLKSYQQDSSKQEFIDFIQTRFKCCGIESYKDWQANRYFSCSSPVPTAC 188
>SB_31428| Best HMM Match : Tetraspannin (HMM E-Value=0)
Length = 280
Score = 39.1 bits (87), Expect = 0.004
Identities = 22/74 (29%), Positives = 35/74 (47%)
Frame = +3
Query: 6 SVMRNLNASITQYPVDKNVQKTIDIIQTDLQCCGINSPADWADHGLPIPSTCCSAQEIND 185
++ L + +Y D Q ID +QT L+CCG+ S DW + C S ++
Sbjct: 137 ALKERLKQDLKKYLDDPLNQDLIDFMQTLLKCCGVESYKDWQANPY---FNCSSPGRMSC 193
Query: 186 GVVAACTENSTNFH 227
GV +C + S F+
Sbjct: 194 GVPFSCCKESIQFN 207
>SB_32096| Best HMM Match : Tetraspannin (HMM E-Value=1.1e-13)
Length = 174
Score = 37.9 bits (84), Expect = 0.009
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 6/87 (6%)
Frame = +3
Query: 6 SVMRNLNASITQYPVDKNVQKTIDIIQTDLQCCGINS-PADWADH-----GLPIPSTCCS 167
S++ +L I +P + +D IQ LQCCG +S P DW ++ +P +CC
Sbjct: 67 SILADLKNRIKNFPGPGT--RVVDSIQERLQCCGADSGPNDWMNNKHFLQSASVPDSCCK 124
Query: 168 AQEINDGVVAACTENSTNFHSKGCLTK 248
+ +T H++ C +K
Sbjct: 125 QEYREKDCGLGQIIANTRIHTEPCASK 151
>SB_54678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 35.5 bits (78), Expect = 0.046
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +3
Query: 33 ITQYPVDKNVQKTIDIIQTDLQCCGINSPADWADHGLPIPSTCCSAQEIND-GVV-AACT 206
+ Y D ++Q ID IQ++L+CCG S DW +H CSAQ + GV + C
Sbjct: 57 VVHYQDDLDLQNAIDGIQSNLKCCGGYSYHDW-NHNKYFN---CSAQAVEACGVPHSCCV 112
Query: 207 ENSTN 221
E+ N
Sbjct: 113 EDQIN 117
>SB_15887| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 35.1 bits (77), Expect = 0.061
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 9 VMRNLNASITQYPVDKNVQKTIDIIQTDLQCCGINSPADW 128
++ L ++T+Y + ++Q ID +Q + +CCG DW
Sbjct: 108 IVEKLQTAVTKYRDNADLQNLIDGVQQEFKCCGAKGINDW 147
>SB_22250| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 313
Score = 34.7 bits (76), Expect = 0.080
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +3
Query: 9 VMRNLNASITQY--PVDKNVQKTIDIIQTDLQCCGINSPADW 128
V L +I Y P ++ ID +QT+LQCCG+ DW
Sbjct: 165 VTAQLKDAIVLYRDPTKGDLHLIIDTVQTELQCCGVQGLNDW 206
>SB_58139| Best HMM Match : Tetraspannin (HMM E-Value=0.2)
Length = 108
Score = 34.7 bits (76), Expect = 0.080
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 6 SVMRNLNASITQYPVDKNVQKTIDIIQTDLQCCGINSPADW 128
SV ++ I Y + ++Q ID IQ + +CCG +S DW
Sbjct: 39 SVQNQISKGIVNYRDNLDLQNIIDGIQENFKCCGSSSINDW 79
>SB_23554| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 514
Score = 33.9 bits (74), Expect = 0.14
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 9/84 (10%)
Frame = +3
Query: 15 RNLNASITQYPVD--KNVQKTIDIIQTDLQCCGINSPADW-------ADHGLPIPSTCCS 167
+++N +I Y + + D IQ +CCGIN DW +H + +P +CC
Sbjct: 389 KDMNDTIVSYGEKGKEGITDAYDAIQKKEKCCGINGFKDWQRSYYTKGNHSI-VPDSCC- 446
Query: 168 AQEINDGVVAACTENSTNFHSKGC 239
+ ++ G EN + ++KGC
Sbjct: 447 -KTVSKGCGINFKEN--DIYTKGC 467
>SB_48551| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 560
Score = 31.5 bits (68), Expect = 0.75
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -1
Query: 341 SMRISHRGAEPKRYRLQRRRAPYQCPSCENQFSKTSL 231
S R S + K R+ PY+CP CE F+ +S+
Sbjct: 387 SKRFSQSSSLNKHMRVHSGERPYKCPYCEKAFTASSI 423
>SB_31268| Best HMM Match : zf-C2H2 (HMM E-Value=5.04467e-44)
Length = 454
Score = 31.5 bits (68), Expect = 0.75
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = -1
Query: 362 CEWNERGSMRISHRGAEPKRYRLQRRRAPYQCPSCENQFSKTS 234
CE ERG SH A R P+QCP C +F+ S
Sbjct: 368 CEVCERG---FSHSSAVKNHMRTHTGEKPFQCPICNKKFADQS 407
>SB_41644| Best HMM Match : Tetraspannin (HMM E-Value=0)
Length = 252
Score = 31.1 bits (67), Expect = 0.99
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 9/69 (13%)
Frame = +3
Query: 60 VQKTIDIIQTDLQCCGINSPADWAD------HGLPIPSTCC---SAQEINDGVVAACTEN 212
V + ID I D +CCG DW + H +P +CC S + N+ + +++
Sbjct: 139 VTRAIDEIHRDFKCCGNAQYRDWFETKWAKTHPDMVPRSCCKDPSDSKCNENI----SKD 194
Query: 213 STNFHSKGC 239
T + +GC
Sbjct: 195 PTKIYRRGC 203
>SB_26670| Best HMM Match : Tetraspannin (HMM E-Value=1.09301e-43)
Length = 211
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
Frame = +3
Query: 60 VQKTIDIIQTDLQCCGINSPADWA-----DHGLPIPSTCC 164
V K D +Q +CCG+N DW + +P +CC
Sbjct: 146 VTKAFDALQEKQKCCGVNGYLDWKASKKYNGTSTVPDSCC 185
>SB_23414| Best HMM Match : Tetraspannin (HMM E-Value=3.8e-08)
Length = 357
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 18 NLNASITQYPVDKNVQKTIDIIQTDLQCCGINSPADW 128
N + I Y D +++ +D IQ +L+CCG DW
Sbjct: 164 NWSVFILNYQ-DDSIRDDLDSIQKNLKCCGFKDYNDW 199
>SB_43276| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 426
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -1
Query: 329 SHRGAEPKRYRLQRRRAPYQCPSCENQFSKT-SLRVEV 219
+H GA R+ + PY+C C+ FS+ SLR V
Sbjct: 213 THSGALNSHLRIHTGQKPYKCDECDKCFSEAGSLRKHV 250
>SB_36075| Best HMM Match : CCD (HMM E-Value=4.3)
Length = 146
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 36 TQYPVDKNVQKTIDIIQTDLQCCGINSPADWADHGL 143
T+ PV+ Q I + DL G++ ADW+DHGL
Sbjct: 21 TEKPVEVTGQTHIGKLMLDL-VEGLDISADWSDHGL 55
>SB_3588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -1
Query: 329 SHRGAEPKRYRLQRRRAPYQCPSCENQFSKT-SLRVEV 219
+H GA R+ + PY+C C+ FS+ SLR V
Sbjct: 178 THSGALNSHLRIHTGQKPYKCDECDKCFSEAGSLRKHV 215
>SB_20511| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 511
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/53 (35%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Frame = -1
Query: 362 CEWNERGSMRISHRGAEPKR-YRLQRRRAPYQCPSCENQFSKTSLRVEVGRVL 207
C W G R E KR YR PY CP C FS++ R R L
Sbjct: 452 CPWRNCGWK--FRRSDELKRHYRRHTGEKPYACPLCGRAFSRSDHRASHMRKL 502
>SB_9942| Best HMM Match : CCD (HMM E-Value=4.3)
Length = 146
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 36 TQYPVDKNVQKTIDIIQTDLQCCGINSPADWADHGL 143
T+ PV+ Q I + DL G++ ADW+DHGL
Sbjct: 21 TEKPVEVTGQTHIGKLMLDL-VEGLDISADWSDHGL 55
>SB_48437| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4247
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = -2
Query: 712 RYSRE-ERFLKSVFCPEHTCQCCAIV 638
R+S E ERF V+CP C CC+ V
Sbjct: 925 RFSPEGERFNSFVYCPGIDCLCCSTV 950
>SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6489
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Frame = -2
Query: 370 ILAANGTSEAACEYHTEELNQSDTDSNA---GEHHTNVLHVKTSL 245
I + G E HT ++ +N+ GEHHT++ H+K +
Sbjct: 21 IKSTTGIKEGIFSAHTSQVTMPRDSNNSQPSGEHHTSLNHLKDEM 65
>SB_30622| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-14)
Length = 856
Score = 27.9 bits (59), Expect = 9.2
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +1
Query: 412 MIKPLLIRITKFNSISLPTYI*CLNVYCDKC 504
+I+ I I+K + +P + C + YCD C
Sbjct: 388 IIQTFSIEISKTKKVHIPLLLECGHTYCDSC 418
>SB_28072| Best HMM Match : VWA (HMM E-Value=0)
Length = 2979
Score = 27.9 bits (59), Expect = 9.2
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +3
Query: 291 LESVSLWFSSSV*YSHAASLVPFAANMKQFKLQQNTKQNLYDKTITNKNNEIQFY 455
++S+S + S SHAA + + +K+F Q N K++ + K + + QFY
Sbjct: 2039 VKSLSSVLNMSPGRSHAAMVTYSSFPVKEFGFQDNLKEDDFRKLVNRAPYQGQFY 2093
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,980,051
Number of Sequences: 59808
Number of extensions: 373680
Number of successful extensions: 1193
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1193
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2010148439
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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