Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0633
(724 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 159 4e-40
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 156 3e-39
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 143 2e-35
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 143 2e-35
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 136 3e-33
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 75 8e-15
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 75 1e-14
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 57 3e-09
SPBC215.10 |||haloacid dehalogenase-like hydrolase|Schizosacchar... 29 0.51
SPAC4G9.04c |||cleavage and polyadenylation specificity factor |... 27 2.7
SPAC6F12.07 |tom20||mitochondrial TOM complex subunit Tom20|Schi... 26 6.3
SPAC31A2.14 |||WD repeat protein, human WRDR48 family|Schizosacc... 26 6.3
SPBC1778.10c |ppk21|SPBC4C3.11|serine/threonine protein kinase P... 25 8.3
SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 25 8.3
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 25 8.3
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 25 8.3
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 159 bits (386), Expect = 4e-40
Identities = 75/85 (88%), Positives = 80/85 (94%)
Frame = +1
Query: 1 TVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGT 180
TVPAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGLD+ GE NVLIFDLGGGT
Sbjct: 143 TVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQGESNVLIFDLGGGT 202
Query: 181 FDVSILTIEDGIFEVKSTAGDTHLG 255
FDVS+LTIE+GIFEVK+TAGDTHLG
Sbjct: 203 FDVSLLTIEEGIFEVKATAGDTHLG 227
Score = 157 bits (380), Expect = 2e-39
Identities = 75/87 (86%), Positives = 80/87 (91%)
Frame = +3
Query: 249 LGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSL 428
LGGEDFD+R+VNHF+QEFKRK KKD+ N RA+RRLRTACERAKRTLSSS QASIEIDSL
Sbjct: 226 LGGEDFDSRLVNHFIQEFKRKNKKDITGNARAVRRLRTACERAKRTLSSSAQASIEIDSL 285
Query: 429 FEGIDFYTSITRARFEELNADLFRSTM 509
FEGIDFYTSITRARFEEL ADLFR TM
Sbjct: 286 FEGIDFYTSITRARFEELCADLFRKTM 312
Score = 93.9 bits (223), Expect = 2e-20
Identities = 45/72 (62%), Positives = 54/72 (75%)
Frame = +2
Query: 509 EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXX 688
EPVE+ LRD+K+DKA +++IVLVGGSTRIP+VQKL+ DFFNGKE KSINPDE
Sbjct: 313 EPVERVLRDSKVDKASVNEIVLVGGSTRIPRVQKLVSDFFNGKEPCKSINPDEAVAYGAA 372
Query: 689 XXXXILHGDKSE 724
+L GD SE
Sbjct: 373 VQAAVLTGDTSE 384
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 156 bits (378), Expect = 3e-39
Identities = 74/85 (87%), Positives = 79/85 (92%)
Frame = +1
Query: 1 TVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGT 180
TVPAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGLD+ E NVLIFDLGGGT
Sbjct: 143 TVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQHETNVLIFDLGGGT 202
Query: 181 FDVSILTIEDGIFEVKSTAGDTHLG 255
FDVS+LTIE+GIFEVK+TAGDTHLG
Sbjct: 203 FDVSLLTIEEGIFEVKATAGDTHLG 227
Score = 155 bits (375), Expect = 8e-39
Identities = 74/87 (85%), Positives = 80/87 (91%)
Frame = +3
Query: 249 LGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSL 428
LGGEDFD+R+VNHF QEFKRK KKD+ N RA+RRLRTACERAKRTLSSS QASIEIDSL
Sbjct: 226 LGGEDFDSRLVNHFAQEFKRKNKKDITGNARAVRRLRTACERAKRTLSSSAQASIEIDSL 285
Query: 429 FEGIDFYTSITRARFEELNADLFRSTM 509
+EGIDFYTSITRARFEEL ADLFR+TM
Sbjct: 286 YEGIDFYTSITRARFEELCADLFRNTM 312
Score = 93.5 bits (222), Expect = 3e-20
Identities = 45/72 (62%), Positives = 54/72 (75%)
Frame = +2
Query: 509 EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXX 688
EPVEK LRD+K+DK+ +++IVLVGGSTRIP++QKL+ DFFNGKE KSINPDE
Sbjct: 313 EPVEKVLRDSKIDKSSVNEIVLVGGSTRIPRIQKLVSDFFNGKEPCKSINPDEAVAYGAA 372
Query: 689 XXXXILHGDKSE 724
IL GD SE
Sbjct: 373 VQAAILVGDTSE 384
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 143 bits (347), Expect = 2e-35
Identities = 64/85 (75%), Positives = 81/85 (95%)
Frame = +1
Query: 1 TVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGT 180
TVPAYFND+QRQATKDAGTI+GLNV+RI+NEPTAAAIAYGLDK T E++++++DLGGGT
Sbjct: 176 TVPAYFNDAQRQATKDAGTIAGLNVIRIVNEPTAAAIAYGLDKTDT-EKHIVVYDLGGGT 234
Query: 181 FDVSILTIEDGIFEVKSTAGDTHLG 255
FDVS+L+I++G+FEV +T+GDTHLG
Sbjct: 235 FDVSLLSIDNGVFEVLATSGDTHLG 259
Score = 93.9 bits (223), Expect = 2e-20
Identities = 41/87 (47%), Positives = 61/87 (70%)
Frame = +3
Query: 249 LGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSL 428
LGGEDFDNR++N+ + + RK D+ + +A+ +L+ E+AKRTLSS IEI+S
Sbjct: 258 LGGEDFDNRVINYLARTYNRKNNVDVTKDLKAMGKLKREVEKAKRTLSSQKSVRIEIESF 317
Query: 429 FEGIDFYTSITRARFEELNADLFRSTM 509
F G DF +++RA+FEE+N DLF+ T+
Sbjct: 318 FNGQDFSETLSRAKFEEINMDLFKKTL 344
Score = 74.5 bits (175), Expect = 1e-14
Identities = 36/70 (51%), Positives = 50/70 (71%)
Frame = +2
Query: 509 EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXX 688
+PVE+ L+D+ + K++I DIVLVGGSTRIPKVQ+LL+ FF GK+ +K INPDE
Sbjct: 345 KPVEQVLKDSNLKKSEIDDIVLVGGSTRIPKVQELLESFF-GKKASKGINPDEAVAYGAA 403
Query: 689 XXXXILHGDK 718
+L G++
Sbjct: 404 VQAGVLSGEE 413
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 143 bits (347), Expect = 2e-35
Identities = 68/85 (80%), Positives = 75/85 (88%)
Frame = +1
Query: 1 TVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGT 180
TVPAYF+DSQR ATKDAG I+GLNVLRIINEPTAAAIAYGLD K +NVLIFDLGGGT
Sbjct: 147 TVPAYFSDSQRAATKDAGAIAGLNVLRIINEPTAAAIAYGLDAKSDKPKNVLIFDLGGGT 206
Query: 181 FDVSILTIEDGIFEVKSTAGDTHLG 255
FDVS+L I+ G+FEV +TAGDTHLG
Sbjct: 207 FDVSLLKIQGGVFEVLATAGDTHLG 231
Score = 127 bits (307), Expect = 1e-30
Identities = 58/87 (66%), Positives = 73/87 (83%)
Frame = +3
Query: 249 LGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSL 428
LGGEDFDN +V HF+QEFKRK K D++ + RALRRLR+ACERAKR LSS TQ ++E+DSL
Sbjct: 230 LGGEDFDNALVEHFIQEFKRKQKIDISDDPRALRRLRSACERAKRALSSVTQTTVEVDSL 289
Query: 429 FEGIDFYTSITRARFEELNADLFRSTM 509
GIDF +SITRARFE++NA F++T+
Sbjct: 290 SNGIDFSSSITRARFEDINATTFKATI 316
Score = 87.0 bits (206), Expect = 2e-18
Identities = 38/53 (71%), Positives = 47/53 (88%)
Frame = +2
Query: 509 EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 667
+PV K L+D+K+ KA +HDIVLVGGSTRIPKVQ+L+ DFF+G+ LNKSINPDE
Sbjct: 317 DPVAKVLKDSKVPKADVHDIVLVGGSTRIPKVQRLVSDFFDGRALNKSINPDE 369
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 136 bits (329), Expect = 3e-33
Identities = 64/92 (69%), Positives = 76/92 (82%)
Frame = +1
Query: 1 TVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGT 180
TVPAYFNDSQRQATK AG I+GLNVLR++NEPTAAA+AYGLDKK + V +FDLGGGT
Sbjct: 189 TVPAYFNDSQRQATKAAGAIAGLNVLRVVNEPTAAALAYGLDKK--NDAIVAVFDLGGGT 246
Query: 181 FDVSILTIEDGIFEVKSTAGDTHLGVRTLTIA 276
FD+SIL + +G+FEV+ST GDTHLG +A
Sbjct: 247 FDISILELNNGVFEVRSTNGDTHLGGEDFDVA 278
Score = 58.0 bits (134), Expect = 1e-09
Identities = 34/91 (37%), Positives = 52/91 (57%), Gaps = 4/91 (4%)
Frame = +3
Query: 249 LGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSL 428
LGGEDFD +V H V+ FK+ DL+ ++ A++R+R A E+AK LSS ++ I + +
Sbjct: 270 LGGEDFDVALVRHIVETFKKNEGLDLSKDRLAVQRIREAAEKAKCELSSLSKTDISLPFI 329
Query: 429 FEGI----DFYTSITRARFEELNADLFRSTM 509
I+RA+FE+L L R T+
Sbjct: 330 TADATGPKHINMEISRAQFEKLVDPLVRRTI 360
Score = 53.2 bits (122), Expect = 4e-08
Identities = 23/68 (33%), Positives = 43/68 (63%)
Frame = +2
Query: 509 EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXX 688
+P +++L+DA + ++I++++LVGG TR+P+V + ++ F +E KS+NPDE
Sbjct: 361 DPCKRALKDANLQTSEINEVILVGGMTRMPRVVETVKSIFK-REPAKSVNPDEAVAIGAA 419
Query: 689 XXXXILHG 712
+L G
Sbjct: 420 IQGGVLSG 427
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 75.4 bits (177), Expect = 8e-15
Identities = 36/76 (47%), Positives = 50/76 (65%)
Frame = +3
Query: 249 LGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSL 428
LGGE + +VN F +EF++K D N R+L +LR CE KR LS+ T AS +DSL
Sbjct: 252 LGGEQLTDVLVNFFAKEFEKKNGIDPRKNARSLAKLRAQCEITKRVLSNGTTASAAVDSL 311
Query: 429 FEGIDFYTSITRARFE 476
+GIDF++SI R R++
Sbjct: 312 ADGIDFHSSINRLRYD 327
Score = 60.1 bits (139), Expect = 3e-10
Identities = 27/90 (30%), Positives = 55/90 (61%)
Frame = +1
Query: 1 TVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGT 180
+VP YF D+QR+A + A +GL VL++I++P A +A ++ ++ V++ + G
Sbjct: 169 SVPVYFTDAQRKALESAANEAGLPVLQLIHDPAAVILALMYSEEVLIDKTVVVANFGATR 228
Query: 181 FDVSILTIEDGIFEVKSTAGDTHLGVRTLT 270
+VS+++++ G+ + ++ D +LG LT
Sbjct: 229 SEVSVVSVKGGLMTILASVHDENLGGEQLT 258
Score = 31.9 bits (69), Expect = 0.095
Identities = 17/67 (25%), Positives = 32/67 (47%)
Frame = +2
Query: 452 VNYSCSLRGAERRSVQVYHEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFN 631
+ Y + R + E VEK A M+ I +++L GG++ PK+ L++ F
Sbjct: 324 LRYDLAASATLNRMADLVTEAVEK----ANMEPFDISEVILAGGASNTPKLTSLMESIFP 379
Query: 632 GKELNKS 652
+ + +S
Sbjct: 380 EQTIIRS 386
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 74.9 bits (176), Expect = 1e-14
Identities = 39/93 (41%), Positives = 55/93 (59%), Gaps = 4/93 (4%)
Frame = +1
Query: 1 TVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGE----RNVLIFDL 168
++PA+F D QR+A +A I+GLN LR++N+ AAA+ YG+ K E R V I D
Sbjct: 147 SIPAWFTDIQRRALLEAANIAGLNPLRLMNDNAAAALTYGITKTDLPEPESPRRVAIVDF 206
Query: 169 GGGTFDVSILTIEDGIFEVKSTAGDTHLGVRTL 267
G + VSI+ G F +KST D +LG R +
Sbjct: 207 GHSNYSVSIVEFSRGQFHIKSTVCDRNLGSRNM 239
Score = 67.7 bits (158), Expect = 2e-12
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
Frame = +3
Query: 213 YLRGEIHRRR----HPLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAK 380
+ RG+ H + LG + D ++++F EFK KYK D+ +N +A RL TA ER K
Sbjct: 218 FSRGQFHIKSTVCDRNLGSRNMDKALIDYFAAEFKEKYKIDVLSNPKATFRLATAVERLK 277
Query: 381 RTLSSSTQASIEIDSLFEGIDFYTSITRARFEEL 482
+ LS++ A + ++ + ID + I R+ FEEL
Sbjct: 278 KVLSANANAPLNVEMIMNDIDASSFIKRSDFEEL 311
Score = 46.0 bits (104), Expect = 5e-06
Identities = 21/52 (40%), Positives = 37/52 (71%)
Frame = +2
Query: 512 PVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 667
P+EK+L A + K ++ I +VGG TR+P V++++ ++F GK L+ ++N DE
Sbjct: 322 PIEKALELAGIKKEDLYSIEMVGGCTRVPIVKEVIANYF-GKGLSFTLNQDE 372
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 56.8 bits (131), Expect = 3e-09
Identities = 29/82 (35%), Positives = 45/82 (54%)
Frame = +3
Query: 249 LGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSL 428
L G + + +++ F +K+ DL+ N RAL RL R K LS++++A I+ L
Sbjct: 262 LSGNEINRKLIGFMKNSFYQKHGIDLSHNHRALARLEKEALRVKHILSANSEAIASIEEL 321
Query: 429 FEGIDFYTSITRARFEELNADL 494
+GIDF ITR+ E L D+
Sbjct: 322 ADGIDFRLKITRSVLESLCKDM 343
Score = 52.4 bits (120), Expect = 6e-08
Identities = 20/53 (37%), Positives = 38/53 (71%)
Frame = +2
Query: 509 EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 667
EP+ K+L+ A + ++I+ I+L GG++RIP +Q L D+ + +++K++N DE
Sbjct: 349 EPINKALKKANLTFSEINSIILFGGASRIPFIQSTLADYVSSDKISKNVNADE 401
Score = 43.6 bits (98), Expect = 3e-05
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +1
Query: 1 TVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK-GTGERNVLIFDLGGG 177
TVP +FN+ QR +A I +VL +I++ A AI Y L + T +I+D G G
Sbjct: 166 TVPPHFNELQRSILLEAARILNKHVLALIDDNVAVAIEYSLSRSFSTDPTYNIIYDSGSG 225
Query: 178 TFDVSILTIE 207
+ ++++ +
Sbjct: 226 STSATVISFD 235
>SPBC215.10 |||haloacid dehalogenase-like
hydrolase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 29.5 bits (63), Expect = 0.51
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 310 NTKRTSLPTRELLGVCVLHVRGQR-GPCHRPHKRALR*ILSLR 435
N K+ LP E + + + V G GP H+PH R LR + LR
Sbjct: 9 NQKKNVLPKPEDIQLIICDVDGTLLGPDHKPHPRNLRALKYLR 51
>SPAC4G9.04c |||cleavage and polyadenylation specificity factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 638
Score = 27.1 bits (57), Expect = 2.7
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +2
Query: 173 AVPSTCPSLPSRMVSSR*NPPPATPTWG*GL*QSHGQPLCPG 298
++PST P++PS +S + PP T ++ QSH L G
Sbjct: 299 SIPSTIPTIPSAYSASVSSQPPLTHSYVHPGPQSHKYSLSSG 340
>SPAC6F12.07 |tom20||mitochondrial TOM complex subunit
Tom20|Schizosaccharomyces pombe|chr 1|||Manual
Length = 152
Score = 25.8 bits (54), Expect = 6.3
Identities = 26/105 (24%), Positives = 46/105 (43%), Gaps = 7/105 (6%)
Frame = +3
Query: 261 DFDNRMVNHFVQEFKRKYKKDLATNKR----ALRRLRTACERAKRTLSSS-TQASIEIDS 425
D+ R HF + KR+YKK K+ A ++ E A + ++S+ +S E
Sbjct: 23 DYKRRNDPHFRKTLKRRYKKVHEAKKQEEKLATKKFDITVEEALQVVASTPVPSSAEEKE 82
Query: 426 LFEGIDFYTSITRAR--FEELNADLFRSTMSQWRSLSVMPRWIRL 554
LF F + R F++ ++ S + +L V P+ + L
Sbjct: 83 LF----FMQQVARGEQLFQQQPDNIKESAACFYSALKVYPQPVEL 123
>SPAC31A2.14 |||WD repeat protein, human WRDR48
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 962
Score = 25.8 bits (54), Expect = 6.3
Identities = 10/39 (25%), Positives = 22/39 (56%)
Frame = -2
Query: 501 T*TDLRSAPRSEHE*LTCRSQYPQRENLSQCSLVWTMTR 385
T TD+R+ P ++ C+ P + +++ S +W+ +R
Sbjct: 284 TRTDIRNQPNNQSCTAICKQDAPVSDIVARQSFIWSTSR 322
>SPBC1778.10c |ppk21|SPBC4C3.11|serine/threonine protein kinase
Ppk21|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 25.4 bits (53), Expect = 8.3
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -3
Query: 290 KVVDHAIVKVLTPKWVSPAVDFTSKIPSSMV 198
K+ D K+L PK+V+ + D+T+ PSS V
Sbjct: 193 KITDFGTAKILPPKYVN-SPDYTT-FPSSFV 221
>SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 676
Score = 25.4 bits (53), Expect = 8.3
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +1
Query: 178 TFDVSILTIEDGIFEVKSTAGDTHLG-VRTLTIAWS 282
TF I DG+FE GD+HL +T W+
Sbjct: 48 TFPTEIWETRDGLFEEPVGKGDSHLNHTSVMTGNWN 83
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 25.4 bits (53), Expect = 8.3
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +3
Query: 276 MVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASI 413
+++ F EFK++ K D + L+ L + C R R SS SI
Sbjct: 711 ILSSFSNEFKKRLKSDGTSIAHWLQGLASFCGRVFRRYSSLDCTSI 756
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 25.4 bits (53), Expect = 8.3
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = -3
Query: 260 LTPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLS 123
L P P + IP PPPRS ST R P P S
Sbjct: 336 LPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSS 381
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,153,104
Number of Sequences: 5004
Number of extensions: 66375
Number of successful extensions: 264
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 260
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 339215786
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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