Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0633
(724 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 162 3e-40
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 161 7e-40
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 159 2e-39
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 146 2e-35
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 97 1e-20
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 8e-14
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 6e-11
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 64 1e-10
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 64 1e-10
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 1e-09
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 59 3e-09
SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 8e-07
SB_24074| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_29289| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.95
SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5) 31 1.2
SB_41892| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015) 30 2.2
SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06) 29 2.9
SB_28120| Best HMM Match : ScdA_N (HMM E-Value=6.5) 29 2.9
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_38784| Best HMM Match : Apo-VLDL-II (HMM E-Value=8.3) 28 6.7
SB_55740| Best HMM Match : C1_1 (HMM E-Value=3.6) 28 6.7
SB_51001| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_56263| Best HMM Match : G-alpha (HMM E-Value=3.6) 28 8.8
SB_52092| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_45916| Best HMM Match : Cadherin (HMM E-Value=0) 28 8.8
SB_39918| Best HMM Match : WAPL (HMM E-Value=1.8) 28 8.8
SB_25455| Best HMM Match : DUF948 (HMM E-Value=0.11) 28 8.8
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 162 bits (393), Expect = 3e-40
Identities = 78/85 (91%), Positives = 82/85 (96%)
Frame = +1
Query: 1 TVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGT 180
TVPAYF+DSQRQATKDAGTI+GLNVLRIINEPTAAAIAYGLDKK ERNVLI+DLGGGT
Sbjct: 145 TVPAYFHDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGVERNVLIYDLGGGT 204
Query: 181 FDVSILTIEDGIFEVKSTAGDTHLG 255
FDVS+LTIEDGIFEVKSTAGDTHLG
Sbjct: 205 FDVSVLTIEDGIFEVKSTAGDTHLG 229
Score = 160 bits (388), Expect = 1e-39
Identities = 74/86 (86%), Positives = 82/86 (95%)
Frame = +3
Query: 249 LGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSL 428
LGGEDFDN+MV+HFV++FK+KYKKD+ NKRA+RRLRTACERAKRTLSSSTQASIEIDSL
Sbjct: 228 LGGEDFDNKMVDHFVKQFKQKYKKDITPNKRAMRRLRTACERAKRTLSSSTQASIEIDSL 287
Query: 429 FEGIDFYTSITRARFEELNADLFRST 506
FEGIDFYTSITRARFEELN DLF+ T
Sbjct: 288 FEGIDFYTSITRARFEELNQDLFKKT 313
Score = 95.9 bits (228), Expect = 3e-20
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 2/74 (2%)
Frame = +2
Query: 509 EPVEKSLRDAKMD--KAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXX 682
EPVE+++RD+K+ K IHDIVLVGGSTRIPK+QK+LQ+ F GKELNKSINPDE
Sbjct: 315 EPVEQAIRDSKIPGGKESIHDIVLVGGSTRIPKIQKMLQELFGGKELNKSINPDEAVAYG 374
Query: 683 XXXXXXILHGDKSE 724
ILHGDK +
Sbjct: 375 AAVQAAILHGDKDD 388
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 161 bits (390), Expect = 7e-40
Identities = 78/85 (91%), Positives = 80/85 (94%)
Frame = +1
Query: 1 TVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGT 180
TVPAYFNDSQRQATKDAG ISGLNVLRIINEPTAAAIAYGLDKK ERNVLIFDLGGGT
Sbjct: 238 TVPAYFNDSQRQATKDAGVISGLNVLRIINEPTAAAIAYGLDKKVGQERNVLIFDLGGGT 297
Query: 181 FDVSILTIEDGIFEVKSTAGDTHLG 255
FDVS+L+IEDGIFEVKST GDTHLG
Sbjct: 298 FDVSVLSIEDGIFEVKSTHGDTHLG 322
Score = 153 bits (371), Expect = 1e-37
Identities = 71/87 (81%), Positives = 81/87 (93%)
Frame = +3
Query: 249 LGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSL 428
LGGEDFDN MV+ FV++FK+KYKKD+ NKRALRRLRTACERAKRTLSSSTQASIEIDSL
Sbjct: 321 LGGEDFDNNMVDFFVKQFKQKYKKDITPNKRALRRLRTACERAKRTLSSSTQASIEIDSL 380
Query: 429 FEGIDFYTSITRARFEELNADLFRSTM 509
++GIDFYTSITRARFEE+NA LF+ T+
Sbjct: 381 YDGIDFYTSITRARFEEMNAHLFKKTL 407
Score = 99.1 bits (236), Expect = 3e-21
Identities = 47/73 (64%), Positives = 58/73 (79%), Gaps = 1/73 (1%)
Frame = +2
Query: 509 EPVEKSLRDAKMD-KAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXX 685
EPVEK+++D+K++ K +I +IV+VGGSTRIPK+Q LLQ+FFNGKELNKSINPDE
Sbjct: 408 EPVEKAIKDSKLESKEKIDEIVMVGGSTRIPKIQSLLQNFFNGKELNKSINPDEAVAYGA 467
Query: 686 XXXXXILHGDKSE 724
ILHGDKSE
Sbjct: 468 AVQAAILHGDKSE 480
Score = 41.9 bits (94), Expect = 5e-04
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +1
Query: 1 TVPAYFNDSQRQATKDAG 54
TVPAYFNDSQRQATKDAG
Sbjct: 170 TVPAYFNDSQRQATKDAG 187
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 159 bits (386), Expect = 2e-39
Identities = 76/86 (88%), Positives = 83/86 (96%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 TVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGT 180
TVPAYFNDSQRQATKDAGTI+GLNVLR+INEPTAAA+AYGLDK +GE+NVLIFDLGGGT
Sbjct: 145 TVPAYFNDSQRQATKDAGTIAGLNVLRVINEPTAAALAYGLDKSLSGEKNVLIFDLGGGT 204
Query: 181 FDVSILTIEDG-IFEVKSTAGDTHLG 255
FDVSILTI+DG +FEVKSTAGDTHLG
Sbjct: 205 FDVSILTIDDGSLFEVKSTAGDTHLG 230
Score = 152 bits (368), Expect = 3e-37
Identities = 70/87 (80%), Positives = 80/87 (91%)
Frame = +3
Query: 249 LGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSL 428
LGGEDFDNR+VNHFV EFKRKYKKD++ N RA+RRLRTACERAKRTLSSST+ASIE+DSL
Sbjct: 229 LGGEDFDNRLVNHFVAEFKRKYKKDMSKNSRAMRRLRTACERAKRTLSSSTEASIEVDSL 288
Query: 429 FEGIDFYTSITRARFEELNADLFRSTM 509
FEGIDFYT I+RARFE+L +DLF S +
Sbjct: 289 FEGIDFYTKISRARFEDLCSDLFLSCL 315
Score = 93.9 bits (223), Expect = 1e-19
Identities = 41/72 (56%), Positives = 54/72 (75%)
Frame = +2
Query: 509 EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXX 688
+PV K+L DAK K+ IH++VLVGGSTR+PK+QK+L+++F+GK LNKSINPDE
Sbjct: 316 DPVNKALSDAKFSKSDIHEVVLVGGSTRVPKIQKMLEEYFSGKSLNKSINPDEAVAYGAA 375
Query: 689 XXXXILHGDKSE 724
IL GDKS+
Sbjct: 376 VQAAILSGDKSD 387
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 146 bits (354), Expect = 2e-35
Identities = 67/85 (78%), Positives = 79/85 (92%)
Frame = +1
Query: 1 TVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGT 180
TVPAYFND+QRQATKDAG I+GL V+RIINEPTAAAIAYG+DKK GE+N+L+FDLGGGT
Sbjct: 843 TVPAYFNDAQRQATKDAGAIAGLTVMRIINEPTAAAIAYGMDKK-EGEKNILVFDLGGGT 901
Query: 181 FDVSILTIEDGIFEVKSTAGDTHLG 255
FDVS+LTI++G+FEV +T GDTHLG
Sbjct: 902 FDVSLLTIDNGVFEVVATNGDTHLG 926
Score = 101 bits (242), Expect = 6e-22
Identities = 46/87 (52%), Positives = 65/87 (74%)
Frame = +3
Query: 249 LGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSL 428
LGGEDFD ++ HF++ +K+K K++ + RA+++LR E+AKR LS+ QA +EI+S
Sbjct: 925 LGGEDFDQNVMEHFIKLYKKKKGKNIRKDNRAVQKLRREVEKAKRALSTQHQARVEIESF 984
Query: 429 FEGIDFYTSITRARFEELNADLFRSTM 509
FEG DF +TRARFEELNA LF+ST+
Sbjct: 985 FEGEDFSEMLTRARFEELNAKLFKSTL 1011
Score = 81.4 bits (192), Expect = 7e-16
Identities = 37/70 (52%), Positives = 51/70 (72%)
Frame = +2
Query: 509 EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXX 688
+PV+K L DA + K++IH+IVLVGGSTRIPKVQ+L++DFF GKE ++ INPDE
Sbjct: 1012 KPVQKVLEDADLKKSEIHEIVLVGGSTRIPKVQQLVKDFFEGKEPSRGINPDEAVAYGAA 1071
Query: 689 XXXXILHGDK 718
+L G++
Sbjct: 1072 VQAGVLGGEE 1081
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 97.1 bits (231), Expect = 1e-20
Identities = 47/85 (55%), Positives = 62/85 (72%)
Frame = +1
Query: 1 TVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGT 180
+VPA F+ QR AT A +++G+ VLR+INEPTAAA+AYGL KK G NV++ DLGGGT
Sbjct: 175 SVPAEFDIKQRNATVKAASLAGITVLRVINEPTAAALAYGLHKK-EGVANVMVVDLGGGT 233
Query: 181 FDVSILTIEDGIFEVKSTAGDTHLG 255
DVS+L I+ G+F + AG+ LG
Sbjct: 234 LDVSLLNIQGGMFVTMAMAGNNRLG 258
Score = 61.3 bits (142), Expect = 8e-10
Identities = 22/52 (42%), Positives = 42/52 (80%)
Frame = +2
Query: 509 EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPD 664
+P+ + L + ++ K ++ ++VLVGGSTR+PK+++L+Q+FF+GK N +I+P+
Sbjct: 348 QPIRRVLAEVELPKEEVDEVVLVGGSTRVPKIRQLIQEFFDGKPPNVAIDPE 399
Score = 52.4 bits (120), Expect = 4e-07
Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Frame = +3
Query: 249 LGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIE--ID 422
LGG+DF+ R + + +Q +++ + L T ++RLR E AK L+ + + +I+ +
Sbjct: 257 LGGQDFNARFMQYLLQLIHKRFNRQL-TCSEDIQRLRQEVEAAKINLTRTNEVTIKLMLP 315
Query: 423 SLFEG---IDFYTSITRARFEELNADLFRSTMSQWR 521
SL EG + F +I+R FE +N DLF+ + R
Sbjct: 316 SLSEGKKIVKFKETISRKMFETINEDLFKKVLQPIR 351
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 74.5 bits (175), Expect = 8e-14
Identities = 39/93 (41%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Frame = +3
Query: 249 LGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSST-QASIEIDS 425
LGG DFD +V HF QEFK KYK D+ ++ +A +L CE+ K+ +S++T + I I+
Sbjct: 288 LGGRDFDYVLVEHFAQEFKTKYKIDVHSSIKAKIKLGAECEKLKKLMSANTSEIPINIEC 347
Query: 426 LFEGIDFYTSITRARFEELNADLFRSTMSQWRS 524
E D + + RA+FEEL ADL + + RS
Sbjct: 348 FMEDKDVHGRMKRAQFEELAADLLKLVEAPLRS 380
Score = 66.1 bits (154), Expect = 3e-11
Identities = 35/90 (38%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
Frame = +1
Query: 1 TVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKG---TGERNVLIFDLG 171
+VP+Y+ D QR+ DA +GLN LR++N+ TA ++AYG+ K+ RNV+ D+G
Sbjct: 202 SVPSYYTDRQRRCMLDASATAGLNCLRLMNDTTAVSLAYGIYKQDLPTDKPRNVVFVDIG 261
Query: 172 GGTFDVSILTIEDGIFEVKSTAGDTHLGVR 261
+ V I G +V STA + +LG R
Sbjct: 262 HSSLQVCITAFLKGQLKVLSTAVEPNLGGR 291
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 64.9 bits (151), Expect = 6e-11
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 4/91 (4%)
Frame = +3
Query: 249 LGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSL 428
LGGEDFDN ++ + EFK++ DL+ + AL+RLR A E+AK LSSS Q I + +
Sbjct: 35 LGGEDFDNTLLKFLIAEFKKESGVDLSKDSMALQRLREAAEKAKIELSSSVQTDINLPYI 94
Query: 429 FEGID----FYTSITRARFEELNADLFRSTM 509
++R++FE L ADL T+
Sbjct: 95 TVDASGPKHLNMKLSRSKFESLVADLINRTV 125
Score = 64.1 bits (149), Expect = 1e-10
Identities = 30/68 (44%), Positives = 46/68 (67%)
Frame = +2
Query: 512 PVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXX 691
P +K L+DA+++K +I D++LVGG TR+PKVQ+ +QD F G+ +K++NPDE
Sbjct: 127 PCKKCLQDAEINKGEIGDVLLVGGMTRMPKVQQTVQDIF-GRVPSKAVNPDEAVAIGAAI 185
Query: 692 XXXILHGD 715
+L GD
Sbjct: 186 QGGVLAGD 193
Score = 58.0 bits (134), Expect = 7e-09
Identities = 23/35 (65%), Positives = 31/35 (88%)
Frame = +1
Query: 151 VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLG 255
+ ++DLGGGTFD+SIL I+ G+FEVK+T GDT+LG
Sbjct: 2 IAVYDLGGGTFDISILEIQKGVFEVKATNGDTYLG 36
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 64.1 bits (149), Expect = 1e-10
Identities = 30/68 (44%), Positives = 46/68 (67%)
Frame = +2
Query: 512 PVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXX 691
P +K L+DA+++K +I D++LVGG TR+PKVQ+ +QD F G+ +K++NPDE
Sbjct: 72 PCKKCLQDAEINKGEIGDVLLVGGMTRMPKVQQTVQDIF-GRVPSKAVNPDEAVAIGAAI 130
Query: 692 XXXILHGD 715
+L GD
Sbjct: 131 QGGVLAGD 138
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 64.1 bits (149), Expect = 1e-10
Identities = 43/76 (56%), Positives = 47/76 (61%), Gaps = 26/76 (34%)
Frame = +1
Query: 1 TVPAYFNDSQRQATKDAGTISGLN------------------------VLRIINEPTAAA 108
TVPA+FND+QRQATKDAGTI+GL+ VLRIINEPTAAA
Sbjct: 44 TVPAHFNDAQRQATKDAGTIAGLDVLSRTASERPPSRFRRRRPHGRSRVLRIINEPTAAA 103
Query: 109 IAYGLDKK--GTGERN 150
IAYGLDK G ERN
Sbjct: 104 IAYGLDKARGGKAERN 119
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 60.9 bits (141), Expect = 1e-09
Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Frame = +3
Query: 249 LGGEDFDNRMVNHFVQEFKR--KYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEID 422
LGG D R+ +H VQ FK+ K+K ++ + RA+ + R K+ LS++ + +I+
Sbjct: 210 LGGHAIDMRLRDHLVQLFKKNYKFKGEVTQSSRAMAKFYKEALRVKQVLSANNEIFAQIE 269
Query: 423 SLFEGIDFYTSITRARFEELNADLF 497
+F+G DF +TR EE+ DLF
Sbjct: 270 GVFDGKDFRVKVTREELEEMCQDLF 294
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/70 (37%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Frame = +1
Query: 1 TVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK----GTGERNVLIFDL 168
TVP +FN ++R+A A + GLNVL+I+N TA A+ YGL ++ T E++ + +D+
Sbjct: 111 TVPPFFNQAERRALLRAAELVGLNVLQIMNSNTAVALNYGLFQQKSFNDTLEKHFMFYDM 170
Query: 169 GGGTFDVSIL 198
G + +I+
Sbjct: 171 GASSTVATIV 180
Score = 47.6 bits (108), Expect = 1e-05
Identities = 24/52 (46%), Positives = 30/52 (57%)
Frame = +2
Query: 512 PVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 667
PV ++L+ A M I +VLVGG R+PKVQ L EL K+IN DE
Sbjct: 300 PVNRALKSASMTMNDIDSVVLVGGGIRVPKVQDALLRAVKKPELAKNINADE 351
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 59.3 bits (137), Expect = 3e-09
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 5/77 (6%)
Frame = +3
Query: 249 LGGEDFDNRMVNHFVQEFKR-----KYKKDLATNKRALRRLRTACERAKRTLSSSTQASI 413
LGG +FD +++ +FKR K+K D TNKR+ +L+T+ E+ K LS+ A+
Sbjct: 189 LGGRNFDEVLLDLLANDFKRQVLLWKWKIDPLTNKRSKTKLQTSAEQCKNILSTLESANC 248
Query: 414 EIDSLFEGIDFYTSITR 464
+DSL EGIDF ++R
Sbjct: 249 SVDSLCEGIDFQGQVSR 265
>SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 51.2 bits (117), Expect = 8e-07
Identities = 23/59 (38%), Positives = 38/59 (64%)
Frame = +2
Query: 542 MDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDK 718
+ ++ + ++LVGG+TR PK+Q+LL+++F GKE+ + I+PDE IL G K
Sbjct: 35 LKQSSMIQVILVGGATRTPKIQQLLKNYFVGKEICRRISPDEVVAYGAAVQASILMGRK 93
>SB_24074| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 87
Score = 38.7 bits (86), Expect = 0.005
Identities = 17/38 (44%), Positives = 28/38 (73%)
Frame = +2
Query: 554 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 667
+I + +VGGSTRIP ++ ++++ F GKEL ++N DE
Sbjct: 6 EIDSVEIVGGSTRIPAIKDIIKNVF-GKELMTTMNADE 42
>SB_29289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 956
Score = 31.1 bits (67), Expect = 0.95
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 287 LCPGVQEEIQKGPRYQQESS*AFAYCM*EGK 379
LCP ++ + GP +++E AFA C+ GK
Sbjct: 169 LCPSPEQNGEPGPMFEREGGDAFANCVARGK 199
>SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5)
Length = 634
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +1
Query: 151 VLIFDLGGGTFDVSILTIEDGIFEVK 228
V I+DLG GT++++IL E G++ ++
Sbjct: 319 VPIYDLGNGTYEMAILFHEPGVYSIR 344
>SB_41892| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 382
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 278 GQPLCPGVQEEIQKGPRYQQESS*AFAYCM 367
G LCP ++ + GP +++E S AFA C+
Sbjct: 218 GYKLCPLPEQNGEPGPMFEREGSDAFANCV 247
>SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015)
Length = 600
Score = 29.9 bits (64), Expect = 2.2
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +1
Query: 157 IFDLGGGTFDVSILTIEDGIFEV 225
+FDLG G+++V L +E G++ V
Sbjct: 311 VFDLGNGSYEVLFLVMEPGVYRV 333
>SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3235
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +1
Query: 100 AAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHL 252
A A L +G E + D G GT VS + +E+G +++ D H+
Sbjct: 1505 AGAGGLSLAIEGPSEAKLTCQDNGDGTCSVSYIPVEEGDYDIHIKFADEHI 1555
>SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06)
Length = 799
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 248 WVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVP 132
+++PA+ S +PS V +D VP P I+ + VP
Sbjct: 267 YLTPAISTQSTLPSGTVTLDQHNVPHPSGTITLDQHNVP 305
>SB_28120| Best HMM Match : ScdA_N (HMM E-Value=6.5)
Length = 452
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 287 LCPGVQEEIQKGPRYQQESS*AFAYCM*EGK 379
LCP ++ GP +++E S AFA C+ GK
Sbjct: 206 LCPLPEQNGGPGPMFEREGSDAFANCVTRGK 236
>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 29.1 bits (62), Expect = 3.8
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
Frame = -2
Query: 234 GGFHLEDTILDGKDGHVEGTAAEVK--DKYISFSSTLFVKTVSNRSSS--RFIDDSENVQ 67
G F L D+ G++GH EG+ +EV + ++ + F +T S S F ++S ++Q
Sbjct: 285 GVFVLVDSKDSGENGHTEGSNSEVGTIENFVKTQTKQFKQTACKYSESNLEFNENSAHLQ 344
Query: 66 ---ARDGTC 49
AR TC
Sbjct: 345 VYNARISTC 353
>SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 164 TSAAVPSTCPSLPSRMVSSR*NPPPATP 247
T A P P++PSR +R PPP P
Sbjct: 784 TKPATPRVPPNIPSRPPGARPTPPPPPP 811
>SB_38784| Best HMM Match : Apo-VLDL-II (HMM E-Value=8.3)
Length = 439
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 287 LCPGVQEEIQKGPRYQQESS*AFAYCM 367
LCP ++ + GP +++E S AFA C+
Sbjct: 107 LCPLPEQNGEPGPMFEREGSDAFANCV 133
>SB_55740| Best HMM Match : C1_1 (HMM E-Value=3.6)
Length = 533
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 287 LCPGVQEEIQKGPRYQQESS*AFAYCM 367
LCP ++ + GP +++E S AFA C+
Sbjct: 74 LCPLPEQNGEPGPMFEREGSDAFANCV 100
>SB_51001| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 843
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/66 (22%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = -1
Query: 652 RFVELLSIKEILQELLHLGDTSGATH-QYNIVDLSLIHLGITERLLHWLMVDL-NRSAFS 479
+ +E +++ + ++LH D G +N++ + HLG+ E ++ W+ + NRS +
Sbjct: 648 KVLEGFTLQPLFHQVLHQLDCKGFDLVDHNVLIAEMSHLGVHECIIRWVSSFVSNRSQYV 707
Query: 478 SSKRAR 461
+ +R
Sbjct: 708 KIRDSR 713
>SB_56263| Best HMM Match : G-alpha (HMM E-Value=3.6)
Length = 700
Score = 27.9 bits (59), Expect = 8.8
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = -3
Query: 296 LDKVVDHAIVKVLTPKWVSPAVDFTSKIPSSM 201
LD V HAIV+ TPK VS DFT ++ +S+
Sbjct: 349 LDYKVSHAIVEFGTPKEVS-FEDFTKELENSL 379
>SB_52092| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 27.9 bits (59), Expect = 8.8
Identities = 17/74 (22%), Positives = 34/74 (45%)
Frame = +3
Query: 273 RMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYT 452
+ +N + +++K A R + +A T+SS + +I L E + YT
Sbjct: 198 QFINSTNSKTLEEHQKTRADLARLWAHSQELWNQANETVSSISTVKEKITQLDEKLSEYT 257
Query: 453 SITRARFEELNADL 494
+ T R +++ AD+
Sbjct: 258 NRTMERIDQIKADM 271
>SB_45916| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 1774
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -2
Query: 159 DKYISFSSTLFVKTVSNRSSSRFIDDSEN 73
+K ISF +LF+ VSN S+ R+I +E+
Sbjct: 752 NKVISFGPSLFMDKVSNASAGRYICIAES 780
>SB_39918| Best HMM Match : WAPL (HMM E-Value=1.8)
Length = 653
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = +3
Query: 408 SIEIDSLFEGIDFYTSITRARFE-ELNADL-FRSTMSQWRSLSVMPRWI 548
S+ I +L + + Y+SITR FE N + R+ + + S++ +PR++
Sbjct: 455 SVCIRALLQSLGTYSSITRYVFEHNYNPSVRIRALLGMYSSITTIPRYV 503
>SB_25455| Best HMM Match : DUF948 (HMM E-Value=0.11)
Length = 260
Score = 27.9 bits (59), Expect = 8.8
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +3
Query: 417 IDSLFEGIDFYTSITRARFEELNAD--LFRSTMSQWRS 524
+DSL +DF T+ T A F +LN R T+SQ S
Sbjct: 168 LDSLAVRVDFTTNTTNALFTQLNTTDAAIRDTLSQINS 205
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,489,158
Number of Sequences: 59808
Number of extensions: 534089
Number of successful extensions: 1880
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1868
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1925890720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -