Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0632
         (809 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    24   1.2  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    23   2.2  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    23   3.8  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    23   3.8  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   8.8  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   8.8  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    21   8.8  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   8.8  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   8.8  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +1

Query: 238  WSIEGCKSFSDVSYINNELTTKWIQIGWNI 327
            WS  GC     V     + +T+WIQ+  N+
Sbjct: 1514 WSDGGCPMLYFVIEHKKKTSTEWIQVSNNV 1543


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 186 EVHPKSLDFLVCYHFLY 136
           E HPK++D  +C H  Y
Sbjct: 42  EYHPKNIDPNICTHINY 58


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1

Query: 413 GCSSHYRQGPHHQAPP 366
           G + H +QGP HQ PP
Sbjct: 195 GANMH-QQGPPHQQPP 209


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1

Query: 413 GCSSHYRQGPHHQAPP 366
           G + H +QGP HQ PP
Sbjct: 197 GANMH-QQGPPHQQPP 211


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = -3

Query: 411 LQFTLPAGSTSPSTTGNASVG 349
           LQ  LPAGS     +GNA  G
Sbjct: 433 LQTGLPAGSYCDVISGNAENG 453


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = -3

Query: 411 LQFTLPAGSTSPSTTGNASVG 349
           LQ  LPAGS     +GNA  G
Sbjct: 434 LQTGLPAGSYCDVISGNAENG 454


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 318 VEHTLAQNRYLRQR 359
           ++H  A+NRYL +R
Sbjct: 243 LKHEFAENRYLTER 256


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -2

Query: 73  ILLNYSWNNC*SQKSINMWEK 11
           +L+  SW N  +Q+ INM+ K
Sbjct: 355 LLVELSWMNDEAQQEINMFLK 375


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 5/32 (15%), Positives = 16/32 (50%)
 Frame = -2

Query: 436 LWCQLMYKAAVHITGRVHITKHHRECLCRRYL 341
           +WC   +++   +T  +  T+H+   + +  +
Sbjct: 482 MWCGQSFRSLAEMTSHMQQTQHYTNIISQEQI 513


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,165
Number of Sequences: 336
Number of extensions: 5075
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22102797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)