Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0632
         (809 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_06_0143 + 25970745-25970962,25971053-25971140,25971588-259717...    31   1.4  
01_01_1200 - 9670109-9670165,9670569-9670664,9670886-9670969,967...    31   1.4  
01_06_0250 + 27876358-27879261                                         29   3.3  
06_01_0497 + 3555919-3557154,3557815-3558143,3558177-3558775,355...    29   4.4  
02_05_0412 + 28768255-28768290,28769436-28769529,28769650-28771226     28   7.6  

>05_06_0143 +
           25970745-25970962,25971053-25971140,25971588-25971732,
           25972014-25972101,25972179-25972381,25972774-25972913
          Length = 293

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 17/55 (30%), Positives = 25/55 (45%)
 Frame = -2

Query: 598 SPTANNVQQTLQTCR*SLVSPPPRQGCNLNFVFHSALCSCQFAFLNLSSTFDPDL 434
           +PTA NVQ T    + S+    P  G N    FH    +  + FLN  + +  D+
Sbjct: 210 TPTAGNVQNTDYHVQNSIYQVSPDPGFNWKEAFHKKYAALFYTFLNKVADYILDI 264


>01_01_1200 -
           9670109-9670165,9670569-9670664,9670886-9670969,
           9671050-9671118,9671892-9671993,9672807-9672872,
           9673791-9673841,9673953-9674048,9674141-9674279,
           9674343-9674424,9674528-9674723
          Length = 345

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +1

Query: 562 SAMFVGHYLQSVTKRLALGAELVYQSGARIMG 657
           +A + G+Y+QSVTK L+LG E  +    R  G
Sbjct: 201 NAFYGGNYIQSVTKNLSLGTEAFWLGQQRKSG 232


>01_06_0250 + 27876358-27879261
          Length = 967

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +1

Query: 658 GEICIVSGAARYTMDDSEVSATLSAANLHL 747
           GE+C+V G+  Y++D   V   L   NLHL
Sbjct: 155 GELCVVGGSGSYSVDGGSVE-HLRDVNLHL 183


>06_01_0497 +
           3555919-3557154,3557815-3558143,3558177-3558775,
           3558919-3560393
          Length = 1212

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = +2

Query: 473 KLTATQGTVEYKVQITALPWWRGNQTLTTSLQCLLD 580
           KL   QG VE  VQ+TA      +Q + +S+Q +LD
Sbjct: 412 KLLHNQGAVESLVQLTASDGSSSSQNVPSSIQSILD 447


>02_05_0412 + 28768255-28768290,28769436-28769529,28769650-28771226
          Length = 568

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = -1

Query: 371 PPGMPLSEISVLCQCMFHPICIHFVVSSLLMYETSEN-DLQPSIDH 237
           P G PL  ++ +    F  + +     + L+YE S+  D QP I H
Sbjct: 249 PTGTPLKSLAQVVVAAFRKVGMKLPADAELLYEVSDKVDSQPKIAH 294


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,564,374
Number of Sequences: 37544
Number of extensions: 555980
Number of successful extensions: 1285
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1285
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2209429392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)