Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0632
         (809 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70034-6|CAA93850.1|  301|Caenorhabditis elegans Hypothetical pr...    94   9e-20
U40952-2|AAA81737.1|  818|Caenorhabditis elegans Hypothetical pr...    30   2.3  
AF016427-6|AAY86198.1|  177|Caenorhabditis elegans Hypothetical ...    28   6.9  
Z95559-10|CAB63364.2|  327|Caenorhabditis elegans Hypothetical p...    28   9.1  
Z82076-5|CAB04935.2|  307|Caenorhabditis elegans Hypothetical pr...    28   9.1  

>Z70034-6|CAA93850.1|  301|Caenorhabditis elegans Hypothetical
           protein C18E9.6 protein.
          Length = 301

 Score = 94.3 bits (224), Expect = 9e-20
 Identities = 41/91 (45%), Positives = 61/91 (67%)
 Frame = +2

Query: 254 ANHFQMSHTLTMSSQQNGYKLGGTYIGTKQISPTEAFPVVLGDVDPAGNVNCSLIHQLTP 433
           ++HFQ+SHTL++S+   GY+ G TY+GT Q+ P EA+P++LGD D  GN   +++HQL  
Sbjct: 48  SSHFQVSHTLSLSAMNTGYRFGATYVGTNQVGPAEAYPILLGDTDVNGNTTATILHQL-G 106

Query: 434 EIRVKGAAQIQECKLTATQGTVEYKVQITAL 526
             R K   QIQ+ KL   Q T+E K +++ L
Sbjct: 107 IYRTKLQGQIQQGKLAGAQATIERKGRLSTL 137



 Score = 68.9 bits (161), Expect = 4e-12
 Identities = 33/85 (38%), Positives = 52/85 (61%)
 Frame = +1

Query: 520 SLALVAGKPDFNDKSAMFVGHYLQSVTKRLALGAELVYQSGARIMGGEICIVSGAARYTM 699
           +L L     D  +++ + VG +L+ +T RL +G E+VYQ G  I GG+I ++S AARYT 
Sbjct: 136 TLGLTLANIDLVNEAGILVGQFLRRLTPRLDVGTEMVYQYGKNIPGGQISVLSYAARYTA 195

Query: 700 DDSEVSATLSAANLHLCYFKQPANN 774
           +    +ATL A+ +HL Y+ +   N
Sbjct: 196 NHFIAAATLGASGVHLTYYHKQNEN 220



 Score = 49.2 bits (112), Expect = 3e-06
 Identities = 20/36 (55%), Positives = 27/36 (75%)
 Frame = +3

Query: 162 NPGTLDELHKKTKEVMPVNFEGGKLMVNRGLQIIFR 269
           NPG+ +ELH+K ++V P  FEG KLMVN+GL   F+
Sbjct: 17  NPGSYEELHRKARDVFPTCFEGAKLMVNKGLSSHFQ 52


>U40952-2|AAA81737.1|  818|Caenorhabditis elegans Hypothetical
           protein C03B1.7 protein.
          Length = 818

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = +2

Query: 389 PAGNVNCSLIHQLTPEIRV--KGAAQIQECKLTATQGTVEYKVQ 514
           PAG +   LI +L PE+ V   G    Q+ +    Q TVE+K++
Sbjct: 245 PAGKIEKKLIKELNPEMMVGRDGRRYRQKLREAEKQATVEFKLE 288


>AF016427-6|AAY86198.1|  177|Caenorhabditis elegans Hypothetical
           protein F32D1.11 protein.
          Length = 177

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = -1

Query: 395 RQGPHHQAPPGMPLSEISVLCQCMFHPICIHFVVSSLL 282
           RQ  H   PP  P  + S+LC C   P+C   V S +L
Sbjct: 96  RQRRHVTGPPASPGEQASLLCVCT-TPMCNKGVYSKVL 132


>Z95559-10|CAB63364.2|  327|Caenorhabditis elegans Hypothetical
           protein Y41E3.15 protein.
          Length = 327

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 15/53 (28%), Positives = 27/53 (50%)
 Frame = -2

Query: 496 SALCSCQFAFLNLSSTFDPDLWCQLMYKAAVHITGRVHITKHHRECLCRRYLF 338
           + +CSC   F++ S      ++C   Y + ++ITG + +T     C C  +LF
Sbjct: 82  ATVCSC---FISGSLFIQGAVFCS--YPSFIYITGTIVLTTWCTSCACTLFLF 129


>Z82076-5|CAB04935.2|  307|Caenorhabditis elegans Hypothetical
           protein W07G1.3 protein.
          Length = 307

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = -1

Query: 407 SSHYRQGPHHQAPPGMPLSEISVLCQCMFHPICIHFVVSSL 285
           S++Y   P  Q PP    S +    Q MFHP   H V+S +
Sbjct: 102 SNYYTPLPLPQQPPTFDPSTLMPQQQMMFHPGQYHMVMSPI 142


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,913,454
Number of Sequences: 27780
Number of extensions: 485415
Number of successful extensions: 1259
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1258
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)