Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0630
(565 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellu... 139 4e-32
UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellul... 127 2e-28
UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4... 101 9e-21
UniRef50_Q5AAQ9 Cluster: Putative uncharacterized protein; n=1; ... 92 7e-18
UniRef50_Q8H6J0 Cluster: Putative 40S ribosomal protein; n=1; Ze... 90 4e-17
UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17; Archa... 88 2e-16
UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellu... 79 5e-14
UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4; ce... 79 7e-14
UniRef50_Q8BGG2 Cluster: Adult male spinal cord cDNA, RIKEN full... 52 1e-05
UniRef50_A3B198 Cluster: Putative uncharacterized protein; n=1; ... 51 2e-05
UniRef50_UPI00004CC6C0 Cluster: PREDICTED: hypothetical protein;... 47 3e-04
UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondr... 42 0.008
UniRef50_Q5K6X0 Cluster: Ribosomal protein S12, putative; n=2; D... 41 0.023
UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=... 40 0.030
UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellul... 40 0.040
UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2; Bilateria|... 38 0.12
UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondria... 38 0.12
UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8; Euteleostomi|... 37 0.28
UniRef50_UPI000049A59F Cluster: ankyrin repeat protein; n=1; Ent... 36 0.49
UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6; Sacchar... 36 0.49
UniRef50_UPI0000D55D7C Cluster: PREDICTED: similar to 40S riboso... 34 2.0
UniRef50_O15235 Cluster: 28S ribosomal protein S12, mitochondria... 34 2.6
UniRef50_Q9TMN0 Cluster: Apicoplast 30S ribosomal protein S12; n... 34 2.6
UniRef50_A4XF13 Cluster: Transcriptional regulator, LysR family;... 33 3.5
UniRef50_Q2H267 Cluster: Putative uncharacterized protein; n=1; ... 33 3.5
UniRef50_A2Y839 Cluster: Putative uncharacterized protein; n=2; ... 33 4.6
UniRef50_Q0UPD2 Cluster: Putative uncharacterized protein; n=1; ... 33 4.6
UniRef50_Q9XTY5 Cluster: Putative uncharacterized protein; n=2; ... 33 6.1
UniRef50_Q0LM97 Cluster: Putative uncharacterized protein; n=1; ... 32 8.1
UniRef50_A5PDQ8 Cluster: Glycosyl transferase, family 2; n=1; Er... 32 8.1
UniRef50_A7AXG1 Cluster: Rps12; n=1; Babesia bovis|Rep: Rps12 - ... 32 8.1
UniRef50_P14149 Cluster: Chloroplast 30S ribosomal protein S12; ... 32 8.1
>UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellular
organisms|Rep: 40S ribosomal protein S23 - Homo sapiens
(Human)
Length = 143
Score = 139 bits (337), Expect = 4e-32
Identities = 66/70 (94%), Positives = 67/70 (95%)
Frame = +3
Query: 255 LIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLAL 434
LIKNGKK+TAFVP DGCLN IEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLAL
Sbjct: 74 LIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLAL 133
Query: 435 YKEKKERPRS 464
YK KKERPRS
Sbjct: 134 YKGKKERPRS 143
Score = 130 bits (313), Expect = 3e-29
Identities = 58/80 (72%), Positives = 70/80 (87%)
Frame = +1
Query: 37 MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLDKVGVQAK 216
MGK RG+RTARK +HRR+Q+W DK++KKAH+GT KANPFGGASHAKGIVL+KVGV+AK
Sbjct: 1 MGKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAK 60
Query: 217 QPNSAIRKCVRVHSLRTERK 276
QPNSAIRKCVRV ++ +K
Sbjct: 61 QPNSAIRKCVRVQLIKNGKK 80
>UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellular
organisms|Rep: 40S ribosomal protein S23 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 145
Score = 127 bits (306), Expect = 2e-28
Identities = 59/70 (84%), Positives = 65/70 (92%)
Frame = +3
Query: 255 LIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLAL 434
LIKNGKKVTAFVP DGCLN ++ENDEVL+AGFGRKG A GDIPGVRFKVVKV+ VSLLAL
Sbjct: 76 LIKNGKKVTAFVPNDGCLNFVDENDEVLLAGFGRKGKAKGDIPGVRFKVVKVSGVSLLAL 135
Query: 435 YKEKKERPRS 464
+KEKKE+PRS
Sbjct: 136 WKEKKEKPRS 145
Score = 110 bits (265), Expect = 2e-23
Identities = 47/79 (59%), Positives = 64/79 (81%)
Frame = +1
Query: 40 GKPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLDKVGVQAKQ 219
GKPRG+ +ARK HRR RWA+ +KK +GT +K++PFGG+SHAKGIVL+K+G+++KQ
Sbjct: 4 GKPRGLNSARKLRVHRRNNRWAENNYKKRLLGTAFKSSPFGGSSHAKGIVLEKLGIESKQ 63
Query: 220 PNSAIRKCVRVHSLRTERK 276
PNSAIRKCVRV ++ +K
Sbjct: 64 PNSAIRKCVRVQLIKNGKK 82
>UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4;
Oryza sativa|Rep: Putative 40s ribosomal protein S23 -
Oryza sativa (Rice)
Length = 301
Score = 101 bits (243), Expect = 9e-21
Identities = 45/78 (57%), Positives = 57/78 (73%)
Frame = +1
Query: 43 KPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLDKVGVQAKQP 222
K G+ RK HRR QRWADK +KK+H G +WK PF G+SHAKGIVL+K+G++AKQP
Sbjct: 74 KTCGMGAGRKLKTHRRNQRWADKAYKKSHFGNEWK-KPFAGSSHAKGIVLEKIGIEAKQP 132
Query: 223 NSAIRKCVRVHSLRTERK 276
NSAI KC RV ++ +K
Sbjct: 133 NSAICKCARVQLVKNGKK 150
Score = 46.8 bits (106), Expect = 3e-04
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = +3
Query: 255 LIKNGKKVTAFVPRDGCLNHIEENDEV 335
L+KNGKK+ AFVP DGCLN I+EN V
Sbjct: 144 LVKNGKKIAAFVPNDGCLNFIKENGPV 170
>UniRef50_Q5AAQ9 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 102
Score = 92.3 bits (219), Expect = 7e-18
Identities = 45/73 (61%), Positives = 52/73 (71%)
Frame = -1
Query: 472 YTYDLGRSFFSL*RARRDTLATFTTLKRTPGMSPTA*PLRPNPATSTSSFSSMWFRQPSR 293
Y YDLG SFFS +A ++T T TTL TPG+SP A PL P PA TSSFSS F+QPS
Sbjct: 3 YIYDLGFSFFSFHKANKETPETLTTLNLTPGISPLALPLLPKPANKTSSFSSTKFKQPSF 62
Query: 292 GTNAVTFFPFLMS 254
GT AVTF PFL++
Sbjct: 63 GTKAVTFLPFLIN 75
Score = 35.5 bits (78), Expect = 0.86
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = -3
Query: 293 GDECGHFLSVLNECTRTHLRMAELGCLACTPTLSRTMPFA 174
G + FL L T TH +AE GCL P S+T+P A
Sbjct: 63 GTKAVTFLPFLINWTSTHFSIAEFGCLDSIPIFSKTIPLA 102
>UniRef50_Q8H6J0 Cluster: Putative 40S ribosomal protein; n=1; Zea
mays|Rep: Putative 40S ribosomal protein - Zea mays
(Maize)
Length = 309
Score = 89.8 bits (213), Expect = 4e-17
Identities = 41/46 (89%), Positives = 45/46 (97%)
Frame = +3
Query: 327 DEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS 464
DEVL+AGFGRKGHAVGDIPGVRFKVVKV+ VSLLAL+KEKKE+PRS
Sbjct: 224 DEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 269
>UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17;
Archaea|Rep: 30S ribosomal protein S12P - Pyrobaculum
aerophilum
Length = 147
Score = 87.8 bits (208), Expect = 2e-16
Identities = 41/69 (59%), Positives = 55/69 (79%), Gaps = 1/69 (1%)
Frame = +3
Query: 255 LIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGR-KGHAVGDIPGVRFKVVKVANVSLLA 431
L+KNGK VTAFVP DG LN+I E+DEV++ G +G ++GDIPGVRFKV+KV VSL A
Sbjct: 77 LVKNGKVVTAFVPLDGSLNYINEHDEVVIERIGGPEGRSLGDIPGVRFKVIKVNGVSLWA 136
Query: 432 LYKEKKERP 458
+++ KK++P
Sbjct: 137 IWRGKKQKP 145
Score = 68.9 bits (161), Expect = 8e-11
Identities = 32/73 (43%), Positives = 48/73 (65%)
Frame = +1
Query: 46 PRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLDKVGVQAKQPN 225
P G+ K R++ RW D +K+ +G K +P GA A+GIVL+KVGV+A++PN
Sbjct: 7 PYGLFAGGKLKRKRQKFRWNDVTYKRKMLGLVEKYDPLEGAPMARGIVLEKVGVEARKPN 66
Query: 226 SAIRKCVRVHSLR 264
+A+RKCVRV ++
Sbjct: 67 AAVRKCVRVQLVK 79
>UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellular
organisms|Rep: 30S ribosomal protein S12P - Uncultured
methanogenic archaeon RC-I
Length = 142
Score = 79.4 bits (187), Expect = 5e-14
Identities = 37/69 (53%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Frame = +3
Query: 255 LIKNGKKVTAFVPRDGCLNHIEENDEVLVAGF-GRKGHAVGDIPGVRFKVVKVANVSLLA 431
LIKNG+++TAF P DG +N I+E+DEV + G GR G + GDIPGVRF+V KV +VSL
Sbjct: 72 LIKNGRQITAFCPGDGAINFIDEHDEVTIEGIGGRMGGSYGDIPGVRFRVFKVNDVSLEE 131
Query: 432 LYKEKKERP 458
+ K+++P
Sbjct: 132 MVAGKRDKP 140
Score = 78.6 bits (185), Expect = 9e-14
Identities = 35/70 (50%), Positives = 51/70 (72%)
Frame = +1
Query: 67 RKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLDKVGVQAKQPNSAIRKCV 246
RK V+ R+ RW+D+++ + + KA+P GA AKGIVL+KVGV+AKQPNSAIRKC+
Sbjct: 9 RKLVHDRKLYRWSDRDYARRVLRLDEKADPLEGAPQAKGIVLEKVGVEAKQPNSAIRKCI 68
Query: 247 RVHSLRTERK 276
R+ ++ R+
Sbjct: 69 RIQLIKNGRQ 78
>UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4;
cellular organisms|Rep: Protein splicing (Intein) site -
Caldivirga maquilingensis IC-167
Length = 661
Score = 79.0 bits (186), Expect = 7e-14
Identities = 41/69 (59%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Frame = +3
Query: 255 LIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGR-KGHAVGDIPGVRFKVVKVANVSLLA 431
L KNGK VTAFVP DG LN I E+DEV++ G +G A GD+PGVRFKV KV VSL A
Sbjct: 591 LTKNGKVVTAFVPWDGGLNLINEHDEVIIERIGGPEGRAYGDLPGVRFKVTKVNGVSLKA 650
Query: 432 LYKEKKERP 458
+ KK++P
Sbjct: 651 ILLGKKQKP 659
Score = 72.1 bits (169), Expect = 8e-12
Identities = 34/72 (47%), Positives = 50/72 (69%)
Frame = +1
Query: 46 PRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLDKVGVQAKQPN 225
P G+ ARK R++ RW+D ++KK +G K +P GA A+GIVL+KVGV+A++PN
Sbjct: 7 PLGLYAARKLRRKRQKFRWSDIQYKKRALGFIKKYDPLEGAPMARGIVLEKVGVEARKPN 66
Query: 226 SAIRKCVRVHSL 261
+A+RKCV +L
Sbjct: 67 AAVRKCVTPDTL 78
>UniRef50_Q8BGG2 Cluster: Adult male spinal cord cDNA, RIKEN
full-length enriched library, clone:A330001L23
product:hypothetical protein, full insert sequence; n=8;
Euarchontoglires|Rep: Adult male spinal cord cDNA, RIKEN
full-length enriched library, clone:A330001L23
product:hypothetical protein, full insert sequence - Mus
musculus (Mouse)
Length = 154
Score = 51.6 bits (118), Expect = 1e-05
Identities = 28/78 (35%), Positives = 40/78 (51%)
Frame = -2
Query: 255 VYTDAFADGRVGLLSLYTNFVEDDALCVRCTTERVSLPFRTHVGFLEFFVRPSLFTTVVH 76
++ DA DGR+ L L F + ++LC+R T +R+ L VGFL FV P L +V
Sbjct: 38 LHPDALPDGRIWLFGLNPYFFQHNSLCMRGTPKRIGLQGCAQVGFLVLFVMPLLVPSVTA 97
Query: 75 VLTRRSYSSGFTHLDSTT 22
L S ++ HL T
Sbjct: 98 ELPGSSETTTLAHLAGAT 115
>UniRef50_A3B198 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 128
Score = 51.2 bits (117), Expect = 2e-05
Identities = 22/27 (81%), Positives = 25/27 (92%)
Frame = +3
Query: 327 DEVLVAGFGRKGHAVGDIPGVRFKVVK 407
DEVL++GFG KGHAVGDI GVRF+VVK
Sbjct: 67 DEVLISGFGHKGHAVGDIRGVRFEVVK 93
>UniRef50_UPI00004CC6C0 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 143
Score = 46.8 bits (106), Expect = 3e-04
Identities = 25/73 (34%), Positives = 37/73 (50%)
Frame = -2
Query: 255 VYTDAFADGRVGLLSLYTNFVEDDALCVRCTTERVSLPFRTHVGFLEFFVRPSLFTTVVH 76
++ DA DGR+ L L F + ++LC+R +R+ L VGFL FV P L +V
Sbjct: 69 LHPDALPDGRIWLFGLNPYFFQHNSLCMRGAPKRIGLQGCAQVGFLVLFVMPLLVPSVTA 128
Query: 75 VLTRRSYSSGFTH 37
L S ++ H
Sbjct: 129 ELPGSSETTTLAH 141
Score = 43.6 bits (98), Expect = 0.003
Identities = 22/61 (36%), Positives = 37/61 (60%)
Frame = -3
Query: 437 VESEERHVGYFYHLKTNSGNVTDGVTFTTESRH*YXXXXXXXX*ATVTGDECGHFLSVLN 258
++S++R++GYF HLK +S ++T +TF+T+S + + A + G E L VLN
Sbjct: 9 LQSQQRNIGYFNHLKEDSRDITYSMTFSTKSSN-WIIIFLNEVQAAIIGHERCDLLPVLN 67
Query: 257 E 255
E
Sbjct: 68 E 68
>UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondrial
ribosomal protein S12; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to mitochondrial ribosomal protein
S12 - Nasonia vitripennis
Length = 173
Score = 42.3 bits (95), Expect = 0.008
Identities = 20/34 (58%), Positives = 24/34 (70%)
Frame = +1
Query: 151 NPFGGASHAKGIVLDKVGVQAKQPNSAIRKCVRV 252
NPF GA AKG+VL + + K+PNSA RKCV V
Sbjct: 83 NPFNGAPFAKGVVLKTLIKKPKKPNSANRKCVLV 116
Score = 33.1 bits (72), Expect = 4.6
Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Frame = +3
Query: 243 RPCTLIK--NGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 407
R C L++ NGK++TA++P G ++++E++ VL R G D+PGV+ K V+
Sbjct: 111 RKCVLVRLSNGKEMTAYIP--GIGHNLQEHNIVLC----RVGRC-RDVPGVKIKCVR 160
>UniRef50_Q5K6X0 Cluster: Ribosomal protein S12, putative; n=2;
Dikarya|Rep: Ribosomal protein S12, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 176
Score = 40.7 bits (91), Expect = 0.023
Identities = 20/50 (40%), Positives = 34/50 (68%)
Frame = +3
Query: 258 IKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 407
+ NG+ TA++P +G ++++E+ VLV G G K D+PGVR+K+V+
Sbjct: 108 LSNGQMTTAYIPGEG--HNLQEHSVVLVRGGGAK-----DLPGVRYKIVR 150
>UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=3;
Coelomata|Rep: Mitochondrial ribosomal protein S12 -
Bombyx mori (Silk moth)
Length = 111
Score = 40.3 bits (90), Expect = 0.030
Identities = 20/42 (47%), Positives = 25/42 (59%)
Frame = +1
Query: 127 HMGTKWKANPFGGASHAKGIVLDKVGVQAKQPNSAIRKCVRV 252
H+ + NP G AKG+VL V + K+PNSA RKCV V
Sbjct: 13 HIKKRKSRNPLNGNPFAKGVVLKTVIKKPKKPNSANRKCVLV 54
>UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellular
organisms|Rep: 30S ribosomal protein S12 - Aquifex
aeolicus
Length = 128
Score = 39.9 bits (89), Expect = 0.040
Identities = 22/52 (42%), Positives = 37/52 (71%)
Frame = +3
Query: 258 IKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVA 413
+ NG +VTA++P +G ++++E+ VLV G GR V D+PGVR+K+++ A
Sbjct: 57 LSNGIEVTAYIPGEG--HNLQEHSIVLVRG-GR----VKDLPGVRYKIIRGA 101
>UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2;
Bilateria|Rep: EG:BACH59J11.1 protein - Drosophila
melanogaster (Fruit fly)
Length = 154
Score = 38.3 bits (85), Expect = 0.12
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +1
Query: 127 HMGTKWKANPFGGASHAKGIVLDKVGVQAKQPNSAIRKCVRV 252
H+ T+ P G AKG+VL + + K+PNSA RKCV V
Sbjct: 56 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLV 97
>UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondrial
precursor; n=7; Coelomata|Rep: 40S ribosomal protein
S12, mitochondrial precursor - Drosophila melanogaster
(Fruit fly)
Length = 140
Score = 38.3 bits (85), Expect = 0.12
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +1
Query: 127 HMGTKWKANPFGGASHAKGIVLDKVGVQAKQPNSAIRKCVRV 252
H+ T+ P G AKG+VL + + K+PNSA RKCV V
Sbjct: 42 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLV 83
>UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8;
Euteleostomi|Rep: Mrps12-prov protein - Xenopus laevis
(African clawed frog)
Length = 150
Score = 37.1 bits (82), Expect = 0.28
Identities = 22/57 (38%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Frame = +3
Query: 243 RPCTLIK--NGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 407
R C ++ NGK+V F+P +G ++++E++ VLV G GR D+PGV+ K+V+
Sbjct: 89 RKCARVRLSNGKEVICFIPGEG--HNLQEHNIVLVEG-GR----TQDLPGVKLKIVR 138
Score = 33.1 bits (72), Expect = 4.6
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +1
Query: 154 PFGGASHAKGIVLDKVGVQAKQPNSAIRKCVRV 252
P G KG+VL + + K+PNSA RKC RV
Sbjct: 62 PTFGCPQLKGVVLKTMIRKPKKPNSANRKCARV 94
>UniRef50_UPI000049A59F Cluster: ankyrin repeat protein; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: ankyrin repeat
protein - Entamoeba histolytica HM-1:IMSS
Length = 681
Score = 36.3 bits (80), Expect = 0.49
Identities = 23/71 (32%), Positives = 41/71 (57%)
Frame = +3
Query: 252 TLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLA 431
T IK + V+ F+P + L ++ N+ V V +KG AVG I G R+ + +A +++
Sbjct: 542 TAIKKVRMVSDFMPEEEELLRLKSNEIVEVYWEHKKGWAVGGING-RYGMFPLAKGTIIP 600
Query: 432 LYKEKKERPRS 464
L KE++++ S
Sbjct: 601 LSKEEQDKINS 611
>UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6;
Saccharomycetales|Rep: 30S ribosomal protein S12 -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 183
Score = 36.3 bits (80), Expect = 0.49
Identities = 22/60 (36%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Frame = +3
Query: 240 MRPCTLIK--NGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVA 413
+R C ++ NGK ++A +P +G ++++E+ VLV G GR V D+PGV++ +V+ A
Sbjct: 108 LRKCARVRLSNGKVISALIPGEG--HNLQEHHVVLVRG-GR----VQDVPGVKYHLVRGA 160
>UniRef50_UPI0000D55D7C Cluster: PREDICTED: similar to 40S ribosomal
protein S12, mitochondrial precursor (MT-RPS12)
(Technical knockout locus protein); n=2; Coelomata|Rep:
PREDICTED: similar to 40S ribosomal protein S12,
mitochondrial precursor (MT-RPS12) (Technical knockout
locus protein) - Tribolium castaneum
Length = 156
Score = 34.3 bits (75), Expect = 2.0
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +1
Query: 127 HMGTKWKANPFGGASHAKGIVLDKVGVQAKQPNSAIRKCVRV 252
H+ + P G KG+VL + + K+PNSA RKCV V
Sbjct: 60 HIKERKPRRPLDGKPFMKGVVLKTLIKKPKKPNSANRKCVLV 101
>UniRef50_O15235 Cluster: 28S ribosomal protein S12, mitochondrial
precursor; n=13; Deuterostomia|Rep: 28S ribosomal
protein S12, mitochondrial precursor - Homo sapiens
(Human)
Length = 138
Score = 33.9 bits (74), Expect = 2.6
Identities = 20/44 (45%), Positives = 24/44 (54%)
Frame = +1
Query: 145 KANPFGGASHAKGIVLDKVGVQAKQPNSAIRKCVRVHSLRTERK 276
K P G KG+VL + K+PNSA RKC RV L T R+
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVR-LSTGRE 90
>UniRef50_Q9TMN0 Cluster: Apicoplast 30S ribosomal protein S12; n=3;
Eukaryota|Rep: Apicoplast 30S ribosomal protein S12 -
Toxoplasma gondii
Length = 121
Score = 33.9 bits (74), Expect = 2.6
Identities = 16/50 (32%), Positives = 36/50 (72%)
Frame = +3
Query: 258 IKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 407
+KN K++ A++P +G + +++++ VL+ +KG V D+PG+++KV++
Sbjct: 55 LKNKKEILAYIPGEG--HALQDHNFVLI----KKGR-VQDLPGIKYKVIR 97
>UniRef50_A4XF13 Cluster: Transcriptional regulator, LysR family;
n=1; Novosphingobium aromaticivorans DSM 12444|Rep:
Transcriptional regulator, LysR family - Novosphingobium
aromaticivorans (strain DSM 12444)
Length = 315
Score = 33.5 bits (73), Expect = 3.5
Identities = 19/51 (37%), Positives = 23/51 (45%)
Frame = +1
Query: 67 RKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLDKVGVQAKQ 219
R+H + W EF A G W ANP G A+ A G+V Q KQ
Sbjct: 193 RRHAGALQSLGWG-YEFDAALPGGPWSANPAGEAAQAAGLVTFNAWPQLKQ 242
>UniRef50_Q2H267 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 141
Score = 33.5 bits (73), Expect = 3.5
Identities = 20/52 (38%), Positives = 33/52 (63%)
Frame = +3
Query: 258 IKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVA 413
+ GK +TA++P +G ++I+++ VLV G GR D PGVR+ +V+ A
Sbjct: 70 LSTGKVITAYIPGEG--HNIQQHSVVLVRG-GRS----QDCPGVRYHLVRGA 114
>UniRef50_A2Y839 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 450
Score = 33.1 bits (72), Expect = 4.6
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +2
Query: 152 TLSVVHLTQRASSSTKLVYKLSSPTLPSANAS 247
TL +H QRA+++T Y S P PSAN S
Sbjct: 386 TLETLHTDQRANATTSYSYSQSQPPSPSANPS 417
>UniRef50_Q0UPD2 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 739
Score = 33.1 bits (72), Expect = 4.6
Identities = 20/44 (45%), Positives = 25/44 (56%)
Frame = -1
Query: 376 SPTA*PLRPNPATSTSSFSSMWFRQPSRGTNAVTFFPFLMSVHG 245
S +A P R +PA T+S S WFRQ A+T FP L+ HG
Sbjct: 316 SKSASPQR-SPAPGTNSPRSGWFRQQEE-LKAITEFPSLLDPHG 357
>UniRef50_Q9XTY5 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 157
Score = 32.7 bits (71), Expect = 6.1
Identities = 17/30 (56%), Positives = 18/30 (60%)
Frame = +1
Query: 163 GASHAKGIVLDKVGVQAKQPNSAIRKCVRV 252
G SH KGIVL V K+PNS RKC V
Sbjct: 72 GYSHYKGIVLKTVIRHPKKPNSGNRKCAIV 101
>UniRef50_Q0LM97 Cluster: Putative uncharacterized protein; n=1;
Herpetosiphon aurantiacus ATCC 23779|Rep: Putative
uncharacterized protein - Herpetosiphon aurantiacus ATCC
23779
Length = 234
Score = 32.3 bits (70), Expect = 8.1
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = -1
Query: 316 MWFRQPSRGTNAVTFFPFLMSVHGRICGWQS 224
+WF S G+ ++FF F++ + G + GWQ+
Sbjct: 127 IWFIGGSGGSEEISFFWFILGLFGLVVGWQA 157
>UniRef50_A5PDQ8 Cluster: Glycosyl transferase, family 2; n=1;
Erythrobacter sp. SD-21|Rep: Glycosyl transferase,
family 2 - Erythrobacter sp. SD-21
Length = 351
Score = 32.3 bits (70), Expect = 8.1
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = -3
Query: 272 LSVLNEC-TRTHLRM---AELGCLACTPTLSRTMPFA*DAPPKGLAFHFVPMWAFLNSLS 105
++++N+C TRT R+ A+ GC AC SR P + + + WAF +
Sbjct: 249 VAMMNDCETRTSARLLGRAQGGCGACLK--SRAAEDDPLCDPALIPYALLREWAFAANRF 306
Query: 104 AHRCSRRWFTCLRAVRIPRGLP 39
HR R LRA P LP
Sbjct: 307 PHRDYREILASLRAASAPAPLP 328
>UniRef50_A7AXG1 Cluster: Rps12; n=1; Babesia bovis|Rep: Rps12 -
Babesia bovis
Length = 123
Score = 32.3 bits (70), Expect = 8.1
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 264 NGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVV 404
N K V A+VP + + I +N VL+ KG V D+PGV++KV+
Sbjct: 58 NKKTVLAYVPGENVI--IPKNSRVLI-----KGGNVPDLPGVKYKVI 97
>UniRef50_P14149 Cluster: Chloroplast 30S ribosomal protein S12;
n=5; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S12 - Chlamydomonas reinhardtii
Length = 133
Score = 32.3 bits (70), Expect = 8.1
Identities = 20/50 (40%), Positives = 33/50 (66%)
Frame = +3
Query: 258 IKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 407
+ G +VTA++P G ++++E+ VLV G GR V D+PGVR+ +V+
Sbjct: 57 LTTGFEVTAYIPGVG--HNLQEHAVVLVRG-GR----VKDLPGVRYHIVR 99
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 615,078,303
Number of Sequences: 1657284
Number of extensions: 13311424
Number of successful extensions: 33197
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33115
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37904934977
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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