Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0630
(565 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0466 - 34134138-34134278,34134355-34134481,34134558-341347... 133 1e-31
01_06_1253 - 35753546-35753686,35753759-35753885,35753970-357541... 133 1e-31
10_06_0053 - 10110617-10111271,10112023-10112417,10112565-101126... 101 3e-22
05_03_0026 + 7466017-7466034,7466340-7466405,7466572-7466833,746... 51 6e-07
05_07_0323 + 29260608-29260836,29262242-29262513,29263349-292634... 33 0.16
03_01_0309 - 2432395-2433271,2433494-2434495,2434538-2435073,243... 29 1.9
04_04_1489 - 33938426-33939363,33939429-33939813 29 2.6
06_03_1377 - 29692895-29692899,29700435-29702190 29 3.4
06_03_0672 + 23359510-23361253,23389969-23390203,23392078-233922... 29 3.4
03_01_0298 + 2318836-2319051,2321238-2323106 29 3.4
02_05_0568 - 30034280-30034393,30034888-30035163,30035246-300353... 29 3.4
05_07_0053 - 27364449-27365021,27365117-27365352,27365993-27367880 28 4.5
04_04_1193 + 31634043-31634349,31634685-31634847,31635048-316366... 28 4.5
04_01_0440 + 5746474-5746662,5746895-5747251 28 4.5
10_07_0158 + 13580360-13580590,13581252-13581312,13581359-135814... 28 5.9
02_01_0392 - 2858631-2858698,2859479-2859563,2859887-2859981,286... 28 5.9
01_01_0529 + 3874865-3876285,3876352-3876367 28 5.9
07_01_1054 + 9250298-9250428,9250889-9251489 27 7.8
01_01_0357 - 2816650-2817897 27 7.8
>03_06_0466 -
34134138-34134278,34134355-34134481,34134558-34134713,
34135831-34135835
Length = 142
Score = 133 bits (321), Expect = 1e-31
Identities = 60/70 (85%), Positives = 66/70 (94%)
Frame = +3
Query: 255 LIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLAL 434
L+KNGKK+ AFVP DGCLN IEENDEVL+AGFGRKGHAVGDIPGVRFKVVKV+ VSLLAL
Sbjct: 73 LVKNGKKIAAFVPNDGCLNFIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLAL 132
Query: 435 YKEKKERPRS 464
+KEKKE+PRS
Sbjct: 133 FKEKKEKPRS 142
Score = 113 bits (272), Expect = 9e-26
Identities = 49/80 (61%), Positives = 62/80 (77%)
Frame = +1
Query: 37 MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLDKVGVQAK 216
MGK RG+ RK HRR QRWADK +KK+H+G +WK PF G+SHAKGIVL+K+G++AK
Sbjct: 1 MGKTRGMGAGRKLKTHRRNQRWADKAYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEAK 59
Query: 217 QPNSAIRKCVRVHSLRTERK 276
QPNSAIRKC RV ++ +K
Sbjct: 60 QPNSAIRKCARVQLVKNGKK 79
>01_06_1253 -
35753546-35753686,35753759-35753885,35753970-35754125,
35754761-35754853,35757132-35757265,35757339-35757465,
35757550-35757705,35758321-35758325
Length = 312
Score = 133 bits (321), Expect = 1e-31
Identities = 60/70 (85%), Positives = 66/70 (94%)
Frame = +3
Query: 255 LIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLAL 434
L+KNGKK+ AFVP DGCLN IEENDEVL+AGFGRKGHAVGDIPGVRFKVVKV+ VSLLAL
Sbjct: 243 LVKNGKKIAAFVPNDGCLNFIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLAL 302
Query: 435 YKEKKERPRS 464
+KEKKE+PRS
Sbjct: 303 FKEKKEKPRS 312
Score = 129 bits (312), Expect = 1e-30
Identities = 58/68 (85%), Positives = 64/68 (94%)
Frame = +3
Query: 255 LIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLAL 434
L+KNGKK+ AFVP DGCLN IEENDEVL+AGFGRKGHAVGDIPGVRFKVVKV+ VSLLAL
Sbjct: 73 LVKNGKKIAAFVPNDGCLNFIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLAL 132
Query: 435 YKEKKERP 458
+KEKKE+P
Sbjct: 133 FKEKKEKP 140
Score = 118 bits (283), Expect = 4e-27
Identities = 50/85 (58%), Positives = 65/85 (76%)
Frame = +1
Query: 22 CRAIQMGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLDKV 201
C ++ MGK RG+ RK HRR QRWADK +KK+H+G +WK PF G+SHAKGIVL+K+
Sbjct: 166 CPSVNMGKTRGMGAGRKLKTHRRNQRWADKAYKKSHLGNEWK-KPFAGSSHAKGIVLEKI 224
Query: 202 GVQAKQPNSAIRKCVRVHSLRTERK 276
G++AKQPNSAIRKC RV ++ +K
Sbjct: 225 GIEAKQPNSAIRKCARVQLVKNGKK 249
Score = 113 bits (272), Expect = 9e-26
Identities = 49/80 (61%), Positives = 62/80 (77%)
Frame = +1
Query: 37 MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLDKVGVQAK 216
MGK RG+ RK HRR QRWADK +KK+H+G +WK PF G+SHAKGIVL+K+G++AK
Sbjct: 1 MGKTRGMGAGRKLKTHRRNQRWADKAYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEAK 59
Query: 217 QPNSAIRKCVRVHSLRTERK 276
QPNSAIRKC RV ++ +K
Sbjct: 60 QPNSAIRKCARVQLVKNGKK 79
>10_06_0053 -
10110617-10111271,10112023-10112417,10112565-10112650,
10112973-10113021,10114164-10114290,10114372-10114526,
10114730-10114948
Length = 561
Score = 101 bits (243), Expect = 3e-22
Identities = 45/78 (57%), Positives = 57/78 (73%)
Frame = +1
Query: 43 KPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLDKVGVQAKQP 222
K G+ RK HRR QRWADK +KK+H G +WK PF G+SHAKGIVL+K+G++AKQP
Sbjct: 74 KTCGMGAGRKLKTHRRNQRWADKAYKKSHFGNEWK-KPFAGSSHAKGIVLEKIGIEAKQP 132
Query: 223 NSAIRKCVRVHSLRTERK 276
NSAI KC RV ++ +K
Sbjct: 133 NSAICKCARVQLVKNGKK 150
Score = 48.8 bits (111), Expect = 3e-06
Identities = 20/31 (64%), Positives = 24/31 (77%)
Frame = +3
Query: 255 LIKNGKKVTAFVPRDGCLNHIEENDEVLVAG 347
L+KNGKK+ AFVP DGCLN I+EN+ V G
Sbjct: 144 LVKNGKKIAAFVPNDGCLNFIKENEVAYVDG 174
>05_03_0026 +
7466017-7466034,7466340-7466405,7466572-7466833,
7467254-7467294
Length = 128
Score = 51.2 bits (117), Expect = 6e-07
Identities = 22/27 (81%), Positives = 25/27 (92%)
Frame = +3
Query: 327 DEVLVAGFGRKGHAVGDIPGVRFKVVK 407
DEVL++GFG KGHAVGDI GVRF+VVK
Sbjct: 67 DEVLISGFGHKGHAVGDIRGVRFEVVK 93
>05_07_0323 +
29260608-29260836,29262242-29262513,29263349-29263487,
29263581-29263714,29263847-29263970,29264364-29264773
Length = 435
Score = 33.1 bits (72), Expect = 0.16
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +2
Query: 152 TLSVVHLTQRASSSTKLVYKLSSPTLPSANAS 247
TL +H QRA+++T Y S P PSAN S
Sbjct: 365 TLETLHTDQRANATTSYSYSQSQPPSPSANPS 396
>03_01_0309 -
2432395-2433271,2433494-2434495,2434538-2435073,
2435579-2435716,2436050-2436148,2436278-2436346,
2436968-2437063
Length = 938
Score = 29.5 bits (63), Expect = 1.9
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = -2
Query: 516 LIETRFPTAGHLSQCTPMILVAPFSLCRERGET----RWLLLPP*NELRECHRRRDLYDR 349
+++ + T GH+++ P+ L LCR E + ++ P E E H+ DL
Sbjct: 131 ILDKKLGTTGHVAKAAPVFLDETIKLCRVYSEAAKSDQCIMSMPKEETTEEHKETDLTSN 190
Query: 348 I 346
I
Sbjct: 191 I 191
>04_04_1489 - 33938426-33939363,33939429-33939813
Length = 440
Score = 29.1 bits (62), Expect = 2.6
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = +3
Query: 249 CTLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLL 428
C + K KVT+ + + + + + LV+ F + HA + V+FK +K + SL
Sbjct: 284 CLMAKGSSKVTSLSDNESDDDCDDVSYDELVSMF-EELHAYSEKEIVKFKALKKDHASLE 342
Query: 429 ALYKEKK 449
LY+E K
Sbjct: 343 VLYEELK 349
>06_03_1377 - 29692895-29692899,29700435-29702190
Length = 586
Score = 28.7 bits (61), Expect = 3.4
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = +3
Query: 249 CTLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLL 428
C + K KVT+ + + + + + LV+ F + HA + V+FK +K + SL
Sbjct: 372 CLMAKGSSKVTSLSDSESDDDCDDVSYDELVSMF-EELHAYSEKEIVKFKALKKDHASLE 430
Query: 429 ALYKEKK 449
LY+E K
Sbjct: 431 VLYEELK 437
>06_03_0672 +
23359510-23361253,23389969-23390203,23392078-23392234,
23392535-23392597
Length = 732
Score = 28.7 bits (61), Expect = 3.4
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = +3
Query: 249 CTLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLL 428
C + K KVT+ + + + + + LV+ F + HA + V+FK +K + SL
Sbjct: 370 CLMAKGSSKVTSLSDSESDDDCDDVSYDELVSMF-EELHAYSEKEIVKFKALKKDHASLE 428
Query: 429 ALYKEKK 449
LY+E K
Sbjct: 429 VLYEELK 435
>03_01_0298 + 2318836-2319051,2321238-2323106
Length = 694
Score = 28.7 bits (61), Expect = 3.4
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = -2
Query: 246 DAFADGRVGLLSLYTNFVEDDALCVRCTTERVSL 145
DAFA GLLS+ V+D LC+ C E VSL
Sbjct: 422 DAFAQCMGGLLSVV---VKDMRLCIECIDEGVSL 452
>02_05_0568 -
30034280-30034393,30034888-30035163,30035246-30035371,
30035595-30035753,30035893-30036063,30036374-30036493,
30036565-30036924,30038800-30039686,30039790-30040363,
30041379-30041507,30042423-30042494,30042572-30042728,
30042974-30043023,30043569-30044327
Length = 1317
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = -1
Query: 376 SPTA*PLRPNPATSTSSFSSMWFRQPSRGTNAVTFFP 266
+PT P PNP ST SM F+ PS A FP
Sbjct: 3 TPTGNP-NPNPNPSTPFEVSMLFKPPSNAPAAAPIFP 38
>05_07_0053 - 27364449-27365021,27365117-27365352,27365993-27367880
Length = 898
Score = 28.3 bits (60), Expect = 4.5
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -1
Query: 358 LRPNPATSTSSFSSMWFRQPSRGT 287
L P+ +T T +FS WFR PS+ T
Sbjct: 196 LPPDGSTVTIAFSERWFRIPSKWT 219
>04_04_1193 + 31634043-31634349,31634685-31634847,31635048-31636622,
31636653-31637541,31639401-31641266
Length = 1599
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -3
Query: 290 DECGHFLSVLNECTRTHLRMAELGCLACTPTLSRTMP 180
D C + +SVL E R LR+ LG C S +P
Sbjct: 1081 DGCKNLMSVLFESLRQLLRLKSLGIYNCPQLFSSNVP 1117
>04_01_0440 + 5746474-5746662,5746895-5747251
Length = 181
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +3
Query: 96 AMGGQRIQESPHGYEMEG*PFRWCI-SRKGHRPR 194
A+GG P GY+ +G PF C KG+ PR
Sbjct: 126 AIGGMPAIAVPAGYDNQGVPFAICFGGLKGYEPR 159
>10_07_0158 +
13580360-13580590,13581252-13581312,13581359-13581436,
13581909-13582003,13582327-13582411,13583189-13583256
Length = 205
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = -3
Query: 560 CTQYLLCXRILHFMNL*KRASRQQVTYHNVHL*SWSL 450
C L+ ILHF NL K +Q+ L SWSL
Sbjct: 142 CKTRLVKPSILHFQNLYKEGLLEQLLQSTALLVSWSL 178
>02_01_0392 -
2858631-2858698,2859479-2859563,2859887-2859981,
2860455-2860532,2860579-2860639,2861031-2861176,
2861637-2861703
Length = 199
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = -3
Query: 560 CTQYLLCXRILHFMNL*KRASRQQVTYHNVHL*SWSL 450
C L+ ILHF NL K +Q+ L SWSL
Sbjct: 136 CKTRLVKPSILHFQNLYKEGLLEQLLQSTALLVSWSL 172
>01_01_0529 + 3874865-3876285,3876352-3876367
Length = 478
Score = 27.9 bits (59), Expect = 5.9
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Frame = -1
Query: 430 ARRDTLA---TFTTLKRTPGMSPTA*PLRPNPATSTSSFSSMWFRQPSRGTNAVTFFPFL 260
ARRD+ T + RT G + P TS + W + P R + T +P++
Sbjct: 80 ARRDSFRGDRTTSVASRTSGGKEISVSFELAPPPETSLLTLDWPQGP-RPSEGTTSYPYV 138
Query: 259 MSVHGRI 239
++ HG +
Sbjct: 139 IAAHGNV 145
>07_01_1054 + 9250298-9250428,9250889-9251489
Length = 243
Score = 27.5 bits (58), Expect = 7.8
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = -1
Query: 352 PNPATSTSSFSSMWFRQ--PSRGTNAVTFFPFLMSV 251
P PA SSF + R PSR T+ + PF++S+
Sbjct: 29 PGPAQQASSFGQVTVRSRTPSRTTSILPHPPFVLSI 64
>01_01_0357 - 2816650-2817897
Length = 415
Score = 27.5 bits (58), Expect = 7.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 375 HRRRDLYDRIPPLVLRRFLRCGLGNRHGG 289
H+ ++ DR+PPLVLR + G R G
Sbjct: 175 HQAQEHQDRVPPLVLRHAQQLGRARRVPG 203
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,191,008
Number of Sequences: 37544
Number of extensions: 398247
Number of successful extensions: 1031
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1010
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1027
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1293275844
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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