Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0630
         (565 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70684-7|CAA94601.1|  143|Caenorhabditis elegans Hypothetical pr...   134   5e-32
Z92838-1|CAB07406.1|  157|Caenorhabditis elegans Hypothetical pr...    33   0.19 
U41011-4|AAA82287.1|  294|Caenorhabditis elegans Hypothetical pr...    29   3.1  
AL132898-6|CAC14409.1|  187|Caenorhabditis elegans Hypothetical ...    28   5.3  
AL132898-5|CAC14408.1|  316|Caenorhabditis elegans Hypothetical ...    28   5.3  
Z81128-8|CAB03402.1|  811|Caenorhabditis elegans Hypothetical pr...    27   7.0  
AC084156-1|AAK68491.2|  466|Caenorhabditis elegans Hypothetical ...    27   9.3  

>Z70684-7|CAA94601.1|  143|Caenorhabditis elegans Hypothetical
           protein F28D1.7 protein.
          Length = 143

 Score =  134 bits (323), Expect = 5e-32
 Identities = 57/80 (71%), Positives = 70/80 (87%)
 Frame = +1

Query: 37  MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLDKVGVQAK 216
           MGKP+G+ TARK   HR+EQRW DK +KKAH+GT+WK+NPFGGASHAKGIVL+K+GV+AK
Sbjct: 1   MGKPKGLCTARKLKTHRQEQRWNDKRYKKAHIGTRWKSNPFGGASHAKGIVLEKIGVEAK 60

Query: 217 QPNSAIRKCVRVHSLRTERK 276
           QPNSAIRKCVRV  ++  +K
Sbjct: 61  QPNSAIRKCVRVQLIKNGKK 80



 Score =  131 bits (317), Expect = 3e-31
 Identities = 59/70 (84%), Positives = 65/70 (92%)
 Frame = +3

Query: 255 LIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLAL 434
           LIKNGKK+TAFVP DGCLN +EENDEVLV+GFGR GHAVGDIPGVRFK+VKVAN SL+AL
Sbjct: 74  LIKNGKKITAFVPNDGCLNFVEENDEVLVSGFGRSGHAVGDIPGVRFKIVKVANTSLIAL 133

Query: 435 YKEKKERPRS 464
           +K KKERPRS
Sbjct: 134 FKGKKERPRS 143


>Z92838-1|CAB07406.1|  157|Caenorhabditis elegans Hypothetical
           protein T03D8.2 protein.
          Length = 157

 Score = 32.7 bits (71), Expect = 0.19
 Identities = 17/30 (56%), Positives = 18/30 (60%)
 Frame = +1

Query: 163 GASHAKGIVLDKVGVQAKQPNSAIRKCVRV 252
           G SH KGIVL  V    K+PNS  RKC  V
Sbjct: 72  GYSHYKGIVLKTVIRHPKKPNSGNRKCAIV 101


>U41011-4|AAA82287.1|  294|Caenorhabditis elegans Hypothetical
           protein D2024.4 protein.
          Length = 294

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -2

Query: 108 VRPSLFTTVVHVLTRRSYSSG 46
           VRP + TTV+HV+ R    SG
Sbjct: 189 VRPGIMTTVIHVMDRNPMKSG 209


>AL132898-6|CAC14409.1|  187|Caenorhabditis elegans Hypothetical
           protein Y59A8B.9 protein.
          Length = 187

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -1

Query: 400 TLKRTPGMSPTA*PLRPNPATSTSS 326
           T  RTP  +P A P RP P+ S+++
Sbjct: 38  TTMRTPAATPAAPPTRPTPSRSSAA 62


>AL132898-5|CAC14408.1|  316|Caenorhabditis elegans Hypothetical
           protein Y59A8B.7 protein.
          Length = 316

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -1

Query: 400 TLKRTPGMSPTA*PLRPNPATSTSS 326
           T  RTP  +P A P RP P+ S+++
Sbjct: 167 TTMRTPAATPAAPPTRPTPSRSSAA 191


>Z81128-8|CAB03402.1|  811|Caenorhabditis elegans Hypothetical
           protein T23D8.9a protein.
          Length = 811

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +3

Query: 279 TAFVPRDGCLNHIEEN 326
           T FVP+DG LN I+EN
Sbjct: 653 TPFVPKDGVLNVIDEN 668


>AC084156-1|AAK68491.2|  466|Caenorhabditis elegans Hypothetical
           protein Y46E12BL.4 protein.
          Length = 466

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = -2

Query: 132 HVGFLEFFVRPSLFTTVVHVLTRRS--YSSGFTHLDSTTPIGYGWE 1
           HV  +E+  R      VV V T+ +  +++G+T L  TT   YGW+
Sbjct: 158 HVWQIEWPERQRGTHAVVGVATKNAPLHAAGYTALIGTTDESYGWD 203


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,123,412
Number of Sequences: 27780
Number of extensions: 315362
Number of successful extensions: 825
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 825
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)