Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0628
(675 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0428 + 3055163-3055573 164 7e-41
06_01_0427 - 3054204-3054614 164 7e-41
06_01_0425 - 3045557-3046004,3046852-3046856 164 7e-41
06_01_0423 - 3039527-3039937 164 7e-41
05_04_0449 - 21355439-21355849 164 7e-41
04_03_0909 + 20748653-20749063 164 7e-41
01_06_1456 + 37507156-37507566 164 7e-41
06_01_0217 - 1644696-1645034,1645143-1645214 161 5e-40
03_03_0212 + 15479850-15479921,15479965-15480083,15480175-154802... 161 5e-40
11_01_0348 - 2607315-2607424,2608634-2609030 160 1e-39
02_03_0107 - 15303890-15304060,15304158-15304248,15304505-153046... 150 9e-37
02_03_0108 - 15324922-15325092,15325189-15325279,15325511-15325596 149 2e-36
12_02_0048 - 12852335-12852745 143 1e-34
12_02_0047 - 12836779-12837189 136 1e-32
04_04_0062 + 22437653-22437724,22437866-22437943,22438222-22438392 105 3e-23
05_05_0297 - 23921648-23921758,23922011-23922089,23922774-239228... 100 9e-22
09_04_0353 + 16915618-16916934 31 0.84
02_01_0385 + 2783387-2783695,2784149-2785082,2785206-2785309,278... 30 1.9
03_06_0244 + 32613914-32614666 28 7.8
>06_01_0428 + 3055163-3055573
Length = 136
Score = 164 bits (398), Expect = 7e-41
Identities = 79/84 (94%), Positives = 83/84 (98%)
Frame = +3
Query: 3 IRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLC 182
IR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLC
Sbjct: 52 IRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLC 111
Query: 183 AIHAKRVTIMPKDIQLARRIRGER 254
AIHAKRVTIMPKDIQLARRIRGER
Sbjct: 112 AIHAKRVTIMPKDIQLARRIRGER 135
>06_01_0427 - 3054204-3054614
Length = 136
Score = 164 bits (398), Expect = 7e-41
Identities = 79/84 (94%), Positives = 83/84 (98%)
Frame = +3
Query: 3 IRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLC 182
IR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLC
Sbjct: 52 IRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLC 111
Query: 183 AIHAKRVTIMPKDIQLARRIRGER 254
AIHAKRVTIMPKDIQLARRIRGER
Sbjct: 112 AIHAKRVTIMPKDIQLARRIRGER 135
>06_01_0425 - 3045557-3046004,3046852-3046856
Length = 150
Score = 164 bits (398), Expect = 7e-41
Identities = 79/84 (94%), Positives = 83/84 (98%)
Frame = +3
Query: 3 IRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLC 182
IR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLC
Sbjct: 66 IRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLC 125
Query: 183 AIHAKRVTIMPKDIQLARRIRGER 254
AIHAKRVTIMPKDIQLARRIRGER
Sbjct: 126 AIHAKRVTIMPKDIQLARRIRGER 149
>06_01_0423 - 3039527-3039937
Length = 136
Score = 164 bits (398), Expect = 7e-41
Identities = 79/84 (94%), Positives = 83/84 (98%)
Frame = +3
Query: 3 IRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLC 182
IR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLC
Sbjct: 52 IRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLC 111
Query: 183 AIHAKRVTIMPKDIQLARRIRGER 254
AIHAKRVTIMPKDIQLARRIRGER
Sbjct: 112 AIHAKRVTIMPKDIQLARRIRGER 135
>05_04_0449 - 21355439-21355849
Length = 136
Score = 164 bits (398), Expect = 7e-41
Identities = 79/84 (94%), Positives = 83/84 (98%)
Frame = +3
Query: 3 IRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLC 182
IR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLC
Sbjct: 52 IRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLC 111
Query: 183 AIHAKRVTIMPKDIQLARRIRGER 254
AIHAKRVTIMPKDIQLARRIRGER
Sbjct: 112 AIHAKRVTIMPKDIQLARRIRGER 135
>04_03_0909 + 20748653-20749063
Length = 136
Score = 164 bits (398), Expect = 7e-41
Identities = 79/84 (94%), Positives = 83/84 (98%)
Frame = +3
Query: 3 IRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLC 182
IR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLC
Sbjct: 52 IRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLC 111
Query: 183 AIHAKRVTIMPKDIQLARRIRGER 254
AIHAKRVTIMPKDIQLARRIRGER
Sbjct: 112 AIHAKRVTIMPKDIQLARRIRGER 135
>01_06_1456 + 37507156-37507566
Length = 136
Score = 164 bits (398), Expect = 7e-41
Identities = 79/84 (94%), Positives = 83/84 (98%)
Frame = +3
Query: 3 IRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLC 182
IR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLC
Sbjct: 52 IRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLC 111
Query: 183 AIHAKRVTIMPKDIQLARRIRGER 254
AIHAKRVTIMPKDIQLARRIRGER
Sbjct: 112 AIHAKRVTIMPKDIQLARRIRGER 135
>06_01_0217 - 1644696-1645034,1645143-1645214
Length = 136
Score = 161 bits (391), Expect = 5e-40
Identities = 79/84 (94%), Positives = 82/84 (97%)
Frame = +3
Query: 3 IRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLC 182
IR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS A+ ALQEA+EAYLVGLFEDTNLC
Sbjct: 52 IRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLC 111
Query: 183 AIHAKRVTIMPKDIQLARRIRGER 254
AIHAKRVTIMPKDIQLARRIRGER
Sbjct: 112 AIHAKRVTIMPKDIQLARRIRGER 135
>03_03_0212 +
15479850-15479921,15479965-15480083,15480175-15480265,
15480363-15480533
Length = 150
Score = 161 bits (391), Expect = 5e-40
Identities = 79/84 (94%), Positives = 82/84 (97%)
Frame = +3
Query: 3 IRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLC 182
IR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS A+ ALQEA+EAYLVGLFEDTNLC
Sbjct: 66 IRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLC 125
Query: 183 AIHAKRVTIMPKDIQLARRIRGER 254
AIHAKRVTIMPKDIQLARRIRGER
Sbjct: 126 AIHAKRVTIMPKDIQLARRIRGER 149
>11_01_0348 - 2607315-2607424,2608634-2609030
Length = 168
Score = 160 bits (388), Expect = 1e-39
Identities = 77/82 (93%), Positives = 81/82 (98%)
Frame = +3
Query: 3 IRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLC 182
IR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLC
Sbjct: 52 IRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLC 111
Query: 183 AIHAKRVTIMPKDIQLARRIRG 248
AIHAKRVTIMPKDIQLARRIRG
Sbjct: 112 AIHAKRVTIMPKDIQLARRIRG 133
>02_03_0107 -
15303890-15304060,15304158-15304248,15304505-15304614,
15304715-15304784,15306365-15306558
Length = 211
Score = 150 bits (364), Expect = 9e-37
Identities = 73/85 (85%), Positives = 80/85 (94%)
Frame = +3
Query: 3 IRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLC 182
IR+YQK+TELLIRKLPFQRLVREIAQ FK D+RFQS A+ ALQEA+EAYLVGLFEDTNLC
Sbjct: 127 IRKYQKNTELLIRKLPFQRLVREIAQHFKHDMRFQSHAVLALQEAAEAYLVGLFEDTNLC 186
Query: 183 AIHAKRVTIMPKDIQLARRIRGERL 257
AIH+KRVTIM KD+QLARRIRGERL
Sbjct: 187 AIHSKRVTIMSKDVQLARRIRGERL 211
>02_03_0108 - 15324922-15325092,15325189-15325279,15325511-15325596
Length = 115
Score = 149 bits (361), Expect = 2e-36
Identities = 73/85 (85%), Positives = 80/85 (94%)
Frame = +3
Query: 3 IRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLC 182
IR+YQK+TELLIRKLPFQRLVREIAQ FK D+RFQS A+ ALQEA+EAYLVGLFEDTNLC
Sbjct: 31 IRKYQKNTELLIRKLPFQRLVREIAQLFKHDMRFQSHAVLALQEAAEAYLVGLFEDTNLC 90
Query: 183 AIHAKRVTIMPKDIQLARRIRGERL 257
AIH+KRVTIM KD+QLARRIRGERL
Sbjct: 91 AIHSKRVTIMSKDVQLARRIRGERL 115
>12_02_0048 - 12852335-12852745
Length = 136
Score = 143 bits (347), Expect = 1e-34
Identities = 69/84 (82%), Positives = 78/84 (92%)
Frame = +3
Query: 3 IRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLC 182
IR YQKSTELLIRKLPFQRLV+EIAQD ++ +RFQS+A+ ALQEA+E YLVGLF+DTNLC
Sbjct: 52 IRTYQKSTELLIRKLPFQRLVQEIAQDVRSYVRFQSSAVVALQEAAETYLVGLFKDTNLC 111
Query: 183 AIHAKRVTIMPKDIQLARRIRGER 254
IHAKRVTIMPKDIQLARRIRGE+
Sbjct: 112 VIHAKRVTIMPKDIQLARRIRGEK 135
>12_02_0047 - 12836779-12837189
Length = 136
Score = 136 bits (330), Expect = 1e-32
Identities = 66/84 (78%), Positives = 74/84 (88%)
Frame = +3
Query: 3 IRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLC 182
IR YQKSTELLIRKLPFQRLV+EI QD ++ +RFQS+A+ LQEA+E YLVGLFEDTNLC
Sbjct: 52 IRTYQKSTELLIRKLPFQRLVQEITQDIRSYVRFQSSAMAVLQEAAETYLVGLFEDTNLC 111
Query: 183 AIHAKRVTIMPKDIQLARRIRGER 254
IHAKRVTIMPKDIQLAR I GE+
Sbjct: 112 VIHAKRVTIMPKDIQLARCIGGEK 135
>04_04_0062 + 22437653-22437724,22437866-22437943,22438222-22438392
Length = 106
Score = 105 bits (252), Expect = 3e-23
Identities = 51/55 (92%), Positives = 53/55 (96%)
Frame = +3
Query: 90 TDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 254
TDLRFQS A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER
Sbjct: 51 TDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 105
>05_05_0297 -
23921648-23921758,23922011-23922089,23922774-23922822,
23923180-23923255,23923693-23923767,23923862-23923992,
23924830-23924935
Length = 208
Score = 100 bits (240), Expect = 9e-22
Identities = 53/85 (62%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 IRRYQKSTELLIRKLPFQRLVREIAQDFKTDL-RFQSAAIGALQEASEAYLVGLFEDTNL 179
IR++QK+TELLI PF RLVREI + D+ R+ A+ ALQEA+E +LV +FE +NL
Sbjct: 60 IRKFQKTTELLIPFAPFSRLVREITDFYSKDVSRWTLEALLALQEAAEYHLVDIFEVSNL 119
Query: 180 CAIHAKRVTIMPKDIQLARRIRGER 254
CAIHAKRVTIM KD+QLARRI G R
Sbjct: 120 CAIHAKRVTIMQKDMQLARRIGGRR 144
>09_04_0353 + 16915618-16916934
Length = 438
Score = 31.1 bits (67), Expect = 0.84
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -2
Query: 260 FKTFTTDSSSKLNILRHDGHTFGVNSTQVGV 168
++ F DS+S +L ++ TFG NST+V V
Sbjct: 160 YQAFYGDSASSAGVLANETFTFGTNSTRVAV 190
>02_01_0385 +
2783387-2783695,2784149-2785082,2785206-2785309,
2785402-2785486,2785517-2787578,2787732-2787753,
2788157-2788327,2791473-2791517,2792558-2793874,
2793962-2794012,2794090-2794188,2794352-2794504,
2794554-2794571
Length = 1789
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +2
Query: 410 KYENDVFHQNSVIGLLAKPRYGHVILCKVH*SQKSP-WMPDL 532
+Y N+ H +V+G+L PR H + K + + P WM D+
Sbjct: 859 QYTNETAHHKTVLGMLVPPRSVHHLAIKGYCGIELPKWMLDI 900
>03_06_0244 + 32613914-32614666
Length = 250
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -3
Query: 133 SWRAPMAADWKRKSVLKS*AISLTRRWKGSLRISNSVD 20
SW A WK +V + + RRWK S+ S+D
Sbjct: 207 SWARHQAMQWKASAVSRLVPAAHRRRWKASVVSRRSLD 244
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,551,881
Number of Sequences: 37544
Number of extensions: 279893
Number of successful extensions: 592
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 591
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1714968940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -