Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0626
         (790 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   3.7  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    23   3.7  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   6.4  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   6.4  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     22   6.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.5  

>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = +2

Query: 248 TSTPGPHQSIPRQLQFRTRTNVQRRVSPREPP 343
           +S P P   +P     + + NV +   P+ PP
Sbjct: 185 SSVPQPQPVLPTYKWMQVKRNVPKPTVPKIPP 216


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = +2

Query: 248 TSTPGPHQSIPRQLQFRTRTNVQRRVSPREPP 343
           +S P P   +P     + + NV +   P+ PP
Sbjct: 185 SSVPQPQPVLPTYKWMQVKRNVPKPTVPKIPP 216


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/22 (40%), Positives = 13/22 (59%), Gaps = 2/22 (9%)
 Frame = -3

Query: 491 IRQQTHVFRHICREDHVD--NH 432
           +R+   +FR  CRE+H    NH
Sbjct: 301 MRELGRIFRAYCRENHASWVNH 322


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
 Frame = +1

Query: 214 VCAALFAACVHDVDTR-ASPINSSSTPVPN 300
           VC  LF A VHD   +    +NS  T + N
Sbjct: 332 VCLCLFGAKVHDESIKPLLTLNSVPTEIYN 361


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -3

Query: 191 LSAGVFNSTFVDCVTSAAW 135
           LS   F++ + DC T+++W
Sbjct: 19  LSCKDFDTLYRDCTTASSW 37


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +3

Query: 630 INDGWHYWMEE 662
           +N+GWH  M+E
Sbjct: 464 LNEGWHKGMDE 474


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,421
Number of Sequences: 336
Number of extensions: 4048
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21376414
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)