Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0626
(790 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8241| Best HMM Match : PDEase_I (HMM E-Value=0) 138 5e-33
SB_2333| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 2e-19
SB_6007| Best HMM Match : PDEase_I (HMM E-Value=0) 75 9e-14
SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 6e-12
SB_59137| Best HMM Match : DUF1417 (HMM E-Value=0.29) 68 1e-11
SB_25695| Best HMM Match : PDEase_I (HMM E-Value=3.1e-36) 50 3e-06
SB_25337| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_17862| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_43076| Best HMM Match : PDEase_I (HMM E-Value=0.0034) 38 0.007
SB_36581| Best HMM Match : HR1 (HMM E-Value=2.2) 29 3.2
SB_15701| Best HMM Match : MT-A70 (HMM E-Value=1.6e-17) 29 3.2
SB_7214| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_59246| Best HMM Match : Podocalyxin (HMM E-Value=0.13) 28 7.5
SB_49824| Best HMM Match : DIL (HMM E-Value=2.8e-15) 28 7.5
SB_47194| Best HMM Match : CBM_19 (HMM E-Value=2) 28 9.9
SB_35795| Best HMM Match : Myc-LZ (HMM E-Value=6.7) 28 9.9
>SB_8241| Best HMM Match : PDEase_I (HMM E-Value=0)
Length = 388
Score = 138 bits (334), Expect = 5e-33
Identities = 63/88 (71%), Positives = 78/88 (88%)
Frame = +3
Query: 255 HPGLTNQFLVNSSSELALMYNDESVLENHHLAVAFKLLQNDGCDIFVNLHKKQRQTLRKM 434
HPG+ N FLV ++SE+ALMYNDESVLENHHLAVAF+LLQ++ CDIF NL K++RQT R+M
Sbjct: 79 HPGVNNHFLVATNSEMALMYNDESVLENHHLAVAFQLLQHEDCDIFENLSKQERQTARRM 138
Query: 435 VIDMVLSTDMSKHMSLLADLKTMVERRK 518
+I+MVL+TD +KHMSLLA LKTMVE +K
Sbjct: 139 IIEMVLATDNAKHMSLLASLKTMVETKK 166
Score = 85.4 bits (202), Expect = 5e-17
Identities = 37/76 (48%), Positives = 54/76 (71%)
Frame = +1
Query: 28 SRELLTTLQIPARTFLAFAVTLEEHYIRDNPFHNSLHAADVTQSTNVLLNTPALNAVFTP 207
+R+LL +I TF+ + +E HY++D PFHN +HAADVTQ+ +VLL+ A + VFT
Sbjct: 3 ARDLLKIFKIKPTTFINYMTLVENHYLKDVPFHNCIHAADVTQTAHVLLSAQAFDNVFTD 62
Query: 208 LEVCAALFAACVHDVD 255
LE+ +A+ A+ VHDVD
Sbjct: 63 LEILSAIIASAVHDVD 78
Score = 53.6 bits (123), Expect = 2e-07
Identities = 23/40 (57%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Frame = +1
Query: 673 KGDRERE-HGMDISPMCDRHNATIRKISSRFIDYIVHPLW 789
+GD+ER+ GM+ISPM DRHNA+I K FID++ PLW
Sbjct: 223 QGDKERDIDGMEISPMMDRHNASIEKSQVVFIDFVAQPLW 262
Score = 35.9 bits (79), Expect = 0.037
Identities = 21/38 (55%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +2
Query: 509 TKKVAG--SGVLLLDNYTDRIQVLENLVHCADLSNPTK 616
TKKVAG SGVL L+NYTDR+QV + L TK
Sbjct: 164 TKKVAGTGSGVLCLENYTDRMQVYGAIAQWYGLRLSTK 201
>SB_2333| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 93.1 bits (221), Expect = 2e-19
Identities = 42/90 (46%), Positives = 66/90 (73%), Gaps = 1/90 (1%)
Frame = +3
Query: 255 HPGLTNQFLVNSSSELALMYNDESVLENHHLAVAFKL-LQNDGCDIFVNLHKKQRQTLRK 431
HPG TN FL N+ SELA++YND +VLE+HH A+AFKL ++D +IF NL ++ +T+R+
Sbjct: 240 HPGYTNSFLCNAGSELAILYNDIAVLESHHAALAFKLTARDDKSNIFSNLDVEEFRTVRQ 299
Query: 432 MVIDMVLSTDMSKHMSLLADLKTMVERRKS 521
+IDMV++T+M++H L+ + +R+S
Sbjct: 300 AIIDMVMATEMTRHFEHLSKFVNSINKRRS 329
Score = 58.0 bits (134), Expect = 8e-09
Identities = 28/55 (50%), Positives = 35/55 (63%)
Frame = +1
Query: 91 LEEHYIRDNPFHNSLHAADVTQSTNVLLNTPALNAVFTPLEVCAALFAACVHDVD 255
+E +Y R N +HNS HAADV +T V L + AV PL+ A+L AA VHDVD
Sbjct: 185 IEANYHRKNAYHNSTHAADVLHATAVFLAKERVKAVLEPLDEVASLIAAIVHDVD 239
Score = 31.5 bits (68), Expect = 0.80
Identities = 20/70 (28%), Positives = 30/70 (42%)
Frame = +2
Query: 431 NGYRHGPLDRYVETHESAGGSEDDGRTKKVAGSGVLLLDNYTDRIQVLENLVHCADLSNP 610
N R +D H S G+ D + A L+ +R + L+ CAD++NP
Sbjct: 325 NKRRSSSMDEVHSVH-SGRGTPDSNTSTSTA------LNTPENRTLIKRMLIKCADIANP 377
Query: 611 TKPLPLYKRW 640
+P L K W
Sbjct: 378 ARPRYLCKEW 387
>SB_6007| Best HMM Match : PDEase_I (HMM E-Value=0)
Length = 511
Score = 74.5 bits (175), Expect = 9e-14
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Frame = +3
Query: 255 HPGLTNQFLVNSSSELALMYNDESVLENHHLAVAFKLLQND-GCDIFVNLHKKQRQTLRK 431
HPG TN FLV + S AL+YND SVLENHH A AF LL +D + L + + R
Sbjct: 221 HPGRTNAFLVATLSHQALLYNDRSVLENHHAAAAFTLLMSDPKYNFLCELSPAEFKRFRF 280
Query: 432 MVIDMVLSTDMSKHMSLLAD 491
+ I+ +L+TD+ +H +L+D
Sbjct: 281 LAIEAILATDLKRHFDILSD 300
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = +1
Query: 7 VAYTAFTSRELLTTLQIPARTFLAFAVTLEEHYIRDNPFHNSLHAADVTQSTNVL 171
V+Y F + +IP R FL + LE Y P+HNS+HA+DV Q L
Sbjct: 91 VSYRIFQNAGFFEIFKIPERKFLNYFFALESGY-HSIPYHNSIHASDVLQGVYFL 144
Score = 37.5 bits (83), Expect = 0.012
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +1
Query: 673 KGDREREHGMDISPMCDRHNATIRKISSRFIDYIVHPLW 789
+GD ER GM +SP DR + ++ FI+++V PL+
Sbjct: 355 QGDDERARGMAVSPYMDRQQPHVAQLQDSFINHLVAPLY 393
>SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1076
Score = 68.5 bits (160), Expect = 6e-12
Identities = 31/76 (40%), Positives = 51/76 (67%)
Frame = +3
Query: 282 VNSSSELALMYNDESVLENHHLAVAFKLLQNDGCDIFVNLHKKQRQTLRKMVIDMVLSTD 461
+N+ +ELAL YND S LENHH AVAF +++ D +I N+ + + +R+ +I +LSTD
Sbjct: 858 INARTELALRYNDISPLENHHCAVAFDIMKQDKSNILQNVSAETFKKIREGMIKCILSTD 917
Query: 462 MSKHMSLLADLKTMVE 509
M++H +L K +++
Sbjct: 918 MARHSDILNKFKELLK 933
>SB_59137| Best HMM Match : DUF1417 (HMM E-Value=0.29)
Length = 421
Score = 67.7 bits (158), Expect = 1e-11
Identities = 29/63 (46%), Positives = 43/63 (68%)
Frame = +1
Query: 4 AVAYTAFTSRELLTTLQIPARTFLAFAVTLEEHYIRDNPFHNSLHAADVTQSTNVLLNTP 183
AV+YT +R+LL +I TF+ + +E HY++D PFHN +HAADVTQ+ +VLL+
Sbjct: 355 AVSYTILQARDLLKIFKIKPTTFINYMTLVENHYLKDVPFHNCIHAADVTQTAHVLLSAQ 414
Query: 184 ALN 192
A +
Sbjct: 415 AFD 417
>SB_25695| Best HMM Match : PDEase_I (HMM E-Value=3.1e-36)
Length = 646
Score = 49.6 bits (113), Expect = 3e-06
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Frame = +1
Query: 13 YTAFTSRELLTTLQIPARTFLAFAVTLEEHYIR-DNPFHNSLHAADVTQSTNVLLNTPAL 189
Y + +I A T F +E Y R NP+HN HAADVT + + L +
Sbjct: 450 YKMHVPENVQKAFEIHAMTLDRFLQDVETGYKRHSNPYHNDCHAADVTHTVHYFLECMGV 509
Query: 190 NAVFTPLEVCAALFAACVHDVD----TRASPINS 279
+ + LEV L +A +HD++ T A INS
Sbjct: 510 SKYLSDLEVFGLLLSAIIHDLEHTGTTNAFHINS 543
Score = 32.7 bits (71), Expect = 0.35
Identities = 11/25 (44%), Positives = 20/25 (80%)
Frame = +2
Query: 566 QVLENLVHCADLSNPTKPLPLYKRW 640
+V++ L+H AD+SNPTK ++++W
Sbjct: 583 EVVQLLLHVADISNPTKDWTIHRQW 607
Score = 31.9 bits (69), Expect = 0.61
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +1
Query: 670 SKGDREREHGMDISPMCDRHNATI 741
++GD E E G+D+SP+CDR I
Sbjct: 617 TQGDMEIELGLDVSPLCDRSTTLI 640
Score = 27.9 bits (59), Expect(2) = 1.3
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 423 LRKMVIDMVLSTDMSKHMSLLADLK 497
+R ++ID VL+TDMS H L +K
Sbjct: 546 VRSLMIDTVLATDMSSHFEQLRLMK 570
Score = 21.4 bits (43), Expect(2) = 1.3
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 255 HPGLTNQFLVNSSSELALM 311
H G TN F +NS +LM
Sbjct: 532 HTGTTNAFHINSRDVRSLM 550
>SB_25337| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1879
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/88 (26%), Positives = 45/88 (51%)
Frame = +3
Query: 255 HPGLTNQFLVNSSSELALMYNDESVLENHHLAVAFKLLQNDGCDIFVNLHKKQRQTLRKM 434
H G N F + S++ LA +Y+ S +E+HH ++ + G +IF L + + K+
Sbjct: 1432 HRGTNNSFQIKSATPLAQLYST-STMEHHHFDQCIMIINSQGNEIFNTLSADEYNKIIKL 1490
Query: 435 VIDMVLSTDMSKHMSLLADLKTMVERRK 518
+ +++TD++ + D VE R+
Sbjct: 1491 LEASIIATDLALYFQRRGDFFKKVENRE 1518
>SB_17862| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/90 (23%), Positives = 48/90 (53%)
Frame = +3
Query: 255 HPGLTNQFLVNSSSELALMYNDESVLENHHLAVAFKLLQNDGCDIFVNLHKKQRQTLRKM 434
H G N F+++ + LA +Y S +E HH +L+++G ++F L + + + ++
Sbjct: 427 HRGKNNAFMLHCKTPLANLYTT-STMEWHHFKQGVFILESEGQNVFGQLDAESYRRVLEL 485
Query: 435 VIDMVLSTDMSKHMSLLADLKTMVERRKSR 524
+ + +++TD+ +L+T+ E + R
Sbjct: 486 IQEAIIATDLMLFFGNKKELETLQENKAFR 515
>SB_43076| Best HMM Match : PDEase_I (HMM E-Value=0.0034)
Length = 233
Score = 38.3 bits (85), Expect = 0.007
Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +3
Query: 291 SSELALMYNDE-SVLENHHLAVAFKLLQNDGCDIFVNL 401
+S LA +Y+ E SV+E HH A +L + GC+IF NL
Sbjct: 93 NSTLAALYSSEGSVMERHHFAQTVCILNSSGCNIFKNL 130
>SB_36581| Best HMM Match : HR1 (HMM E-Value=2.2)
Length = 760
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -3
Query: 548 CLAI-RHRYPRLSSFDHRLQIRQQTHVFRHICREDHVDNH 432
C+ + H Y R S DH++ + H + R DH DNH
Sbjct: 199 CVVLDNHPYYRHSRGDHKVCVVLDNHPYYRHSRGDHKDNH 238
>SB_15701| Best HMM Match : MT-A70 (HMM E-Value=1.6e-17)
Length = 1178
Score = 29.5 bits (63), Expect = 3.2
Identities = 29/113 (25%), Positives = 52/113 (46%), Gaps = 3/113 (2%)
Frame = +3
Query: 351 VAFKLLQNDGCDIFVNLHKKQRQTLRKMVIDM--VLSTDMSKHMSLLADLKTMVERRKSR 524
V FK++ +D ++ +K +Q L + D + D+ ++ LA ++ ++S
Sbjct: 311 VNFKMVDSD-----FDMKEKIQQILSESENDKKRARTMDIDDFLAALALIRNSFSLKQSP 365
Query: 525 VAVSYC*TT-TLIEFKY*RISYTVPI*AILLSRCHCINDGWHYWMEEFFQQRR 680
A +Y T E R+S T P+ ++L C I + W W E FF + R
Sbjct: 366 CACAYPQLVFTKTEPLRLRLSATHPLESVLSLACD-IEENWRSWKEAFFDRIR 417
>SB_7214| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 505
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +1
Query: 1 TAVAYTAFTSRELLTTLQIPARTFLAFAVTLEEHYIRDNPFHNSLHAADVTQSTNVLLNT 180
T A+T T + T P L ++ L+ +I D+P HN+ H D + + ++
Sbjct: 379 TQPAFTYTTPLDSALTYTTPLDPALTYSTPLDSAHIFDSPRHNT-HIFDSPRHNTNIFDS 437
Query: 181 PAL-NAVF 201
P L N +F
Sbjct: 438 PLLSNHIF 445
>SB_59246| Best HMM Match : Podocalyxin (HMM E-Value=0.13)
Length = 1027
Score = 28.3 bits (60), Expect = 7.5
Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Frame = +1
Query: 1 TAVAYTAFTSRELLTTLQIPARTFLAFAVTLEEHYIRDNPF-HNSLHAADVTQSTNVLLN 177
T + T SR LLT IP+RT L + NP +L S N+L
Sbjct: 333 TLITLTPIPSRTLLTLTPIPSRTLLTLTPIPSRTLLTLNPIPSRNLLTLTPIPSRNLLTL 392
Query: 178 TP 183
TP
Sbjct: 393 TP 394
>SB_49824| Best HMM Match : DIL (HMM E-Value=2.8e-15)
Length = 289
Score = 28.3 bits (60), Expect = 7.5
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Frame = +1
Query: 97 EHYIRDNPFHNS--LHAAD-VTQSTNVL-LNTPALNAVFTPLEVCAALFAACVHDVDTRA 264
E ++R N S + A + +TQ+T +L +N L V EVC+AL V + +
Sbjct: 161 EDWVRVNQLEGSGIVEALECITQATQLLQVNKKTLEDVDAICEVCSALNTLQVQKILSMY 220
Query: 265 SPINSSSTPVPN 300
+P N VP+
Sbjct: 221 TPANEYEARVPS 232
>SB_47194| Best HMM Match : CBM_19 (HMM E-Value=2)
Length = 190
Score = 27.9 bits (59), Expect = 9.9
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 599 LSNPTKPLPLYKRWVALLDGRVLPAKAIVN 688
+S+P+ + Y +WVA+L G + AI+N
Sbjct: 37 ISDPSSSVTNYAKWVAVLSGTFMIGGAILN 66
>SB_35795| Best HMM Match : Myc-LZ (HMM E-Value=6.7)
Length = 135
Score = 27.9 bits (59), Expect = 9.9
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = -2
Query: 162 CRLCDIGSVERVVERIVSNIVL 97
C L D+G ++RV+ R+ S+ V+
Sbjct: 108 CNLTDLGGIDRVLRRVFSSFVI 129
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,464,305
Number of Sequences: 59808
Number of extensions: 555278
Number of successful extensions: 1871
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1864
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2167838629
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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