Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0625
(439 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4V5T0 Cluster: IP11918p; n=5; Sophophora|Rep: IP11918p... 93 3e-18
UniRef50_Q1WDR1 Cluster: RING finger-and KH domain-containing pr... 89 4e-17
UniRef50_UPI00015B51F5 Cluster: PREDICTED: hypothetical protein;... 89 5e-17
UniRef50_UPI0000519E78 Cluster: PREDICTED: similar to ring finge... 89 5e-17
UniRef50_Q9NDU4 Cluster: PEM-3; n=1; Ciona savignyi|Rep: PEM-3 -... 87 1e-16
UniRef50_Q8MXW1 Cluster: PEM-3; n=1; Halocynthia roretzi|Rep: PE... 85 5e-16
UniRef50_UPI0000DA2DC7 Cluster: PREDICTED: similar to RING finge... 83 2e-15
UniRef50_Q86XN8 Cluster: RNA-binding protein MEX3D; n=19; Eutele... 83 2e-15
UniRef50_Q6ZN04 Cluster: RNA-binding protein MEX3B; n=30; Eumeta... 83 2e-15
UniRef50_Q16LA3 Cluster: Putative uncharacterized protein; n=1; ... 82 6e-15
UniRef50_Q5U5Q3 Cluster: RNA-binding protein MEX3C; n=26; Eutele... 80 2e-14
UniRef50_A1L3F4 Cluster: RNA-binding protein MEX3B; n=4; Tetrapo... 80 2e-14
UniRef50_A1L020 Cluster: RNA-binding protein MEX3A; n=19; Eutele... 79 3e-14
UniRef50_UPI000065F86F Cluster: RNA-binding protein MEX3A.; n=1;... 77 2e-13
UniRef50_Q95R08 Cluster: Muscle excess protein 3, isoform b; n=4... 73 4e-12
UniRef50_UPI00015A7BF5 Cluster: hypothetical protein LOC569582; ... 52 2e-11
UniRef50_UPI0000ECAF8C Cluster: RNA-binding protein MEX3B (RING ... 52 7e-06
UniRef50_Q4RV39 Cluster: Chromosome 15 SCAF14992, whole genome s... 51 1e-05
UniRef50_UPI0000E80CBB Cluster: PREDICTED: hypothetical protein;... 49 4e-05
UniRef50_UPI0000DC0D49 Cluster: ring finger and KH domain contai... 48 9e-05
UniRef50_Q4T9H3 Cluster: Chromosome 12 SCAF7567, whole genome sh... 44 0.002
UniRef50_UPI0000F1E17D Cluster: PREDICTED: hypothetical protein;... 43 0.002
UniRef50_Q4T9H4 Cluster: Chromosome 12 SCAF7567, whole genome sh... 38 0.071
UniRef50_Q4RV38 Cluster: Chromosome 15 SCAF14992, whole genome s... 38 0.071
UniRef50_UPI0000F1F9CA Cluster: PREDICTED: hypothetical protein;... 36 0.29
UniRef50_A4I4B2 Cluster: Putative uncharacterized protein; n=3; ... 35 0.66
UniRef50_A5NYX0 Cluster: Thioesterase superfamily protein; n=1; ... 32 4.7
UniRef50_A2EQA3 Cluster: Putative uncharacterized protein; n=1; ... 32 4.7
UniRef50_UPI00015B4F8E Cluster: PREDICTED: hypothetical protein;... 31 8.1
UniRef50_Q1YDX1 Cluster: Putative uncharacterized protein; n=1; ... 31 8.1
UniRef50_Q60AI1 Cluster: Spermidine/putrescine import ATP-bindin... 31 8.1
>UniRef50_Q4V5T0 Cluster: IP11918p; n=5; Sophophora|Rep: IP11918p -
Drosophila melanogaster (Fruit fly)
Length = 657
Score = 92.7 bits (220), Expect = 3e-18
Identities = 47/60 (78%), Positives = 49/60 (81%)
Frame = +3
Query: 258 NPLGSPLGFAPPPDDRTKKSQNMTECVPVPSSEHVAEIV*RQGXKIKALRAKTNTYIKTP 437
N L P A +DR+KKSQNMTECVPVPSSEHVAEIV RQG KIKALRAKTNTYIKTP
Sbjct: 130 NCLLLPNAGAVSSEDRSKKSQNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTP 189
>UniRef50_Q1WDR1 Cluster: RING finger-and KH domain-containing
protein; n=2; Echinoida|Rep: RING finger-and KH
domain-containing protein - Paracentrotus lividus
(Common sea urchin)
Length = 491
Score = 89.0 bits (211), Expect = 4e-17
Identities = 42/47 (89%), Positives = 43/47 (91%)
Frame = +3
Query: 297 DDRTKKSQNMTECVPVPSSEHVAEIV*RQGXKIKALRAKTNTYIKTP 437
DDR +KS NMTECVPVPSSEHVAEIV RQG KIKALRAKTNTYIKTP
Sbjct: 45 DDRGRKSSNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTP 91
>UniRef50_UPI00015B51F5 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 433
Score = 88.6 bits (210), Expect = 5e-17
Identities = 42/45 (93%), Positives = 43/45 (95%)
Frame = +3
Query: 303 RTKKSQNMTECVPVPSSEHVAEIV*RQGXKIKALRAKTNTYIKTP 437
R+KKSQNMTECVPVPSSEHVAEIV RQG KIKALRAKTNTYIKTP
Sbjct: 72 RSKKSQNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTP 116
>UniRef50_UPI0000519E78 Cluster: PREDICTED: similar to ring finger
and KH domain containing 3 isoform 2; n=2;
Endopterygota|Rep: PREDICTED: similar to ring finger and
KH domain containing 3 isoform 2 - Apis mellifera
Length = 425
Score = 88.6 bits (210), Expect = 5e-17
Identities = 42/45 (93%), Positives = 43/45 (95%)
Frame = +3
Query: 303 RTKKSQNMTECVPVPSSEHVAEIV*RQGXKIKALRAKTNTYIKTP 437
R+KKSQNMTECVPVPSSEHVAEIV RQG KIKALRAKTNTYIKTP
Sbjct: 74 RSKKSQNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTP 118
Score = 31.5 bits (68), Expect = 8.1
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = +1
Query: 184 VEDQRAFKLALELSMLSLGDNLPAATRWGARSG 282
+EDQRA +LALELSML L + P G +G
Sbjct: 21 LEDQRALQLALELSMLGL-EGTPGCPGTGTGTG 52
>UniRef50_Q9NDU4 Cluster: PEM-3; n=1; Ciona savignyi|Rep: PEM-3 -
Ciona savignyi (Pacific transparent sea squirt)
Length = 465
Score = 87.4 bits (207), Expect = 1e-16
Identities = 41/45 (91%), Positives = 43/45 (95%)
Frame = +3
Query: 303 RTKKSQNMTECVPVPSSEHVAEIV*RQGXKIKALRAKTNTYIKTP 437
++KKSQNMTECVPVPSSEHVAEIV RQG KIKALRAKTNTYIKTP
Sbjct: 54 KSKKSQNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTP 98
>UniRef50_Q8MXW1 Cluster: PEM-3; n=1; Halocynthia roretzi|Rep: PEM-3
- Halocynthia roretzi (Sea squirt)
Length = 574
Score = 85.4 bits (202), Expect = 5e-16
Identities = 40/45 (88%), Positives = 43/45 (95%)
Frame = +3
Query: 303 RTKKSQNMTECVPVPSSEHVAEIV*RQGXKIKALRAKTNTYIKTP 437
++KKSQNMTECVPVPSSEHVAEIV RQG KIKALRAKT+TYIKTP
Sbjct: 55 KSKKSQNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTSTYIKTP 99
>UniRef50_UPI0000DA2DC7 Cluster: PREDICTED: similar to RING finger
and KH domain-containing protein 1; n=1; Rattus
norvegicus|Rep: PREDICTED: similar to RING finger and KH
domain-containing protein 1 - Rattus norvegicus
Length = 613
Score = 83.4 bits (197), Expect = 2e-15
Identities = 40/43 (93%), Positives = 40/43 (93%)
Frame = +3
Query: 309 KKSQNMTECVPVPSSEHVAEIV*RQGXKIKALRAKTNTYIKTP 437
KKS NMTECVPVPSSEHVAEIV RQG KIKALRAKTNTYIKTP
Sbjct: 122 KKSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTP 164
>UniRef50_Q86XN8 Cluster: RNA-binding protein MEX3D; n=19;
Euteleostomi|Rep: RNA-binding protein MEX3D - Homo
sapiens (Human)
Length = 651
Score = 83.4 bits (197), Expect = 2e-15
Identities = 40/43 (93%), Positives = 40/43 (93%)
Frame = +3
Query: 309 KKSQNMTECVPVPSSEHVAEIV*RQGXKIKALRAKTNTYIKTP 437
KKS NMTECVPVPSSEHVAEIV RQG KIKALRAKTNTYIKTP
Sbjct: 174 KKSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTP 216
>UniRef50_Q6ZN04 Cluster: RNA-binding protein MEX3B; n=30;
Eumetazoa|Rep: RNA-binding protein MEX3B - Homo sapiens
(Human)
Length = 569
Score = 83.4 bits (197), Expect = 2e-15
Identities = 40/43 (93%), Positives = 40/43 (93%)
Frame = +3
Query: 309 KKSQNMTECVPVPSSEHVAEIV*RQGXKIKALRAKTNTYIKTP 437
KKS NMTECVPVPSSEHVAEIV RQG KIKALRAKTNTYIKTP
Sbjct: 61 KKSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTP 103
>UniRef50_Q16LA3 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 482
Score = 81.8 bits (193), Expect = 6e-15
Identities = 39/53 (73%), Positives = 44/53 (83%)
Frame = +3
Query: 279 GFAPPPDDRTKKSQNMTECVPVPSSEHVAEIV*RQGXKIKALRAKTNTYIKTP 437
G AP ++R K ++ TECVPVPSSEHVAEIV RQG KIKALRAKTNT+IKTP
Sbjct: 92 GLAPKVEERPVKYKSHTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTFIKTP 144
>UniRef50_Q5U5Q3 Cluster: RNA-binding protein MEX3C; n=26;
Euteleostomi|Rep: RNA-binding protein MEX3C - Homo
sapiens (Human)
Length = 659
Score = 79.8 bits (188), Expect = 2e-14
Identities = 38/43 (88%), Positives = 39/43 (90%)
Frame = +3
Query: 309 KKSQNMTECVPVPSSEHVAEIV*RQGXKIKALRAKTNTYIKTP 437
+KS N TECVPVPSSEHVAEIV RQG KIKALRAKTNTYIKTP
Sbjct: 227 RKSVNTTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTP 269
>UniRef50_A1L3F4 Cluster: RNA-binding protein MEX3B; n=4;
Tetrapoda|Rep: RNA-binding protein MEX3B - Xenopus
laevis (African clawed frog)
Length = 507
Score = 79.8 bits (188), Expect = 2e-14
Identities = 39/43 (90%), Positives = 39/43 (90%)
Frame = +3
Query: 309 KKSQNMTECVPVPSSEHVAEIV*RQGXKIKALRAKTNTYIKTP 437
KKS NMTECV VPSSEHVAEIV RQG KIKALRAKTNTYIKTP
Sbjct: 54 KKSINMTECVQVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTP 96
>UniRef50_A1L020 Cluster: RNA-binding protein MEX3A; n=19;
Euteleostomi|Rep: RNA-binding protein MEX3A - Homo
sapiens (Human)
Length = 520
Score = 79.4 bits (187), Expect = 3e-14
Identities = 38/45 (84%), Positives = 39/45 (86%)
Frame = +3
Query: 303 RTKKSQNMTECVPVPSSEHVAEIV*RQGXKIKALRAKTNTYIKTP 437
R K S N TECVPVP+SEHVAEIV RQG KIKALRAKTNTYIKTP
Sbjct: 125 RLKGSSNTTECVPVPTSEHVAEIVGRQGCKIKALRAKTNTYIKTP 169
>UniRef50_UPI000065F86F Cluster: RNA-binding protein MEX3A.; n=1;
Takifugu rubripes|Rep: RNA-binding protein MEX3A. -
Takifugu rubripes
Length = 456
Score = 77.0 bits (181), Expect = 2e-13
Identities = 36/39 (92%), Positives = 37/39 (94%)
Frame = +3
Query: 321 NMTECVPVPSSEHVAEIV*RQGXKIKALRAKTNTYIKTP 437
N+TECVPVPSSEHVAEIV RQG KIKALRAKTNTYIKTP
Sbjct: 94 NITECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTP 132
>UniRef50_Q95R08 Cluster: Muscle excess protein 3, isoform b; n=4;
Caenorhabditis|Rep: Muscle excess protein 3, isoform b -
Caenorhabditis elegans
Length = 443
Score = 72.5 bits (170), Expect = 4e-12
Identities = 40/64 (62%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Frame = +3
Query: 249 AGSNPLGSPLGFAPPPDDRTKKS-QNMTECVPVPSSEHVAEIV*RQGXKIKALRAKTNTY 425
A +P+ P A + RT QN+TE V VP+SEHVAEIV RQG KIKALRAKTNTY
Sbjct: 52 ASCSPVSDPEDIAQFLNYRTSIGVQNVTESVEVPTSEHVAEIVGRQGCKIKALRAKTNTY 111
Query: 426 IKTP 437
IKTP
Sbjct: 112 IKTP 115
>UniRef50_UPI00015A7BF5 Cluster: hypothetical protein LOC569582;
n=1; Danio rerio|Rep: hypothetical protein LOC569582 -
Danio rerio
Length = 564
Score = 51.6 bits (118), Expect(2) = 2e-11
Identities = 24/26 (92%), Positives = 24/26 (92%)
Frame = +3
Query: 309 KKSQNMTECVPVPSSEHVAEIV*RQG 386
KKS NMTECVPVPSSEHVAEIV RQG
Sbjct: 53 KKSVNMTECVPVPSSEHVAEIVGRQG 78
Score = 38.3 bits (85), Expect(2) = 2e-11
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +3
Query: 384 GXKIKALRAKTNTYIKTP 437
G KIKALRAKTNTYIKTP
Sbjct: 105 GCKIKALRAKTNTYIKTP 122
>UniRef50_UPI0000ECAF8C Cluster: RNA-binding protein MEX3B (RING
finger and KH domain-containing protein 3) (RING finger
protein 195).; n=1; Gallus gallus|Rep: RNA-binding
protein MEX3B (RING finger and KH domain-containing
protein 3) (RING finger protein 195). - Gallus gallus
Length = 379
Score = 51.6 bits (118), Expect = 7e-06
Identities = 24/26 (92%), Positives = 24/26 (92%)
Frame = +3
Query: 309 KKSQNMTECVPVPSSEHVAEIV*RQG 386
KKS NMTECVPVPSSEHVAEIV RQG
Sbjct: 62 KKSVNMTECVPVPSSEHVAEIVGRQG 87
>UniRef50_Q4RV39 Cluster: Chromosome 15 SCAF14992, whole genome
shotgun sequence; n=2; Clupeocephala|Rep: Chromosome 15
SCAF14992, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 218
Score = 50.8 bits (116), Expect = 1e-05
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = +3
Query: 309 KKSQNMTECVPVPSSEHVAEIV*RQGXK 392
K+S NMTECVPVPSSEHVAEIV RQG +
Sbjct: 132 KRSVNMTECVPVPSSEHVAEIVGRQGKR 159
>UniRef50_UPI0000E80CBB Cluster: PREDICTED: hypothetical protein;
n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 309
Score = 49.2 bits (112), Expect = 4e-05
Identities = 23/25 (92%), Positives = 23/25 (92%)
Frame = +3
Query: 309 KKSQNMTECVPVPSSEHVAEIV*RQ 383
KKS NMTECVPVPSSEHVAEIV RQ
Sbjct: 62 KKSVNMTECVPVPSSEHVAEIVGRQ 86
>UniRef50_UPI0000DC0D49 Cluster: ring finger and KH domain
containing 2; n=1; Rattus norvegicus|Rep: ring finger
and KH domain containing 2 - Rattus norvegicus
Length = 270
Score = 48.0 bits (109), Expect = 9e-05
Identities = 22/26 (84%), Positives = 23/26 (88%)
Frame = +3
Query: 309 KKSQNMTECVPVPSSEHVAEIV*RQG 386
+KS N TECVPVPSSEHVAEIV RQG
Sbjct: 154 RKSVNTTECVPVPSSEHVAEIVGRQG 179
>UniRef50_Q4T9H3 Cluster: Chromosome 12 SCAF7567, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 12 SCAF7567, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 227
Score = 43.6 bits (98), Expect = 0.002
Identities = 20/26 (76%), Positives = 22/26 (84%)
Frame = +3
Query: 309 KKSQNMTECVPVPSSEHVAEIV*RQG 386
++S N TECV VPSSEHVAEIV RQG
Sbjct: 184 RRSVNTTECVAVPSSEHVAEIVGRQG 209
>UniRef50_UPI0000F1E17D Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 164
Score = 43.2 bits (97), Expect = 0.002
Identities = 20/26 (76%), Positives = 22/26 (84%)
Frame = +3
Query: 309 KKSQNMTECVPVPSSEHVAEIV*RQG 386
+KS N TECV VP+SEHVAEIV RQG
Sbjct: 136 RKSVNTTECVMVPTSEHVAEIVGRQG 161
>UniRef50_Q4T9H4 Cluster: Chromosome 12 SCAF7567, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 12
SCAF7567, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 470
Score = 38.3 bits (85), Expect = 0.071
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +3
Query: 384 GXKIKALRAKTNTYIKTP 437
G KIKALRAKTNTYIKTP
Sbjct: 6 GCKIKALRAKTNTYIKTP 23
>UniRef50_Q4RV38 Cluster: Chromosome 15 SCAF14992, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 15 SCAF14992, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 495
Score = 38.3 bits (85), Expect = 0.071
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +3
Query: 384 GXKIKALRAKTNTYIKTP 437
G KIKALRAKTNTYIKTP
Sbjct: 1 GCKIKALRAKTNTYIKTP 18
>UniRef50_UPI0000F1F9CA Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 345
Score = 36.3 bits (80), Expect = 0.29
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 390 KIKALRAKTNTYIKTP 437
KIKALRAKTNTYIKTP
Sbjct: 42 KIKALRAKTNTYIKTP 57
>UniRef50_A4I4B2 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania infantum
Length = 578
Score = 35.1 bits (77), Expect = 0.66
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -1
Query: 385 PCRQTISATCSEDGTGTHSVMFCDFLVRSSGGGAN-PSGLPSGLLPASCRP 236
PC++T++ C+ FC +L S A GLP+G LP S P
Sbjct: 340 PCKETVTVPCACGSRHVSCPCFCQYLPESEWEAARVRCGLPTGTLPVSMPP 390
>UniRef50_A5NYX0 Cluster: Thioesterase superfamily protein; n=1;
Methylobacterium sp. 4-46|Rep: Thioesterase superfamily
protein - Methylobacterium sp. 4-46
Length = 144
Score = 32.3 bits (70), Expect = 4.7
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
Frame = -1
Query: 331 SVMFCDFLVRSSGGG--ANPSGL--PSGLLPASCRPGSACS 221
S++FCD VR+ GG A SG+ P+GL + RP A S
Sbjct: 103 SILFCDAEVRAEGGALVATASGVFKPTGLAEPTSRPAGAAS 143
>UniRef50_A2EQA3 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 365
Score = 32.3 bits (70), Expect = 4.7
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +3
Query: 234 PGRQLAGSNPLGSPLGFAPPPDDRTKKSQNMTECVPV 344
PG Q G NP G P F PP R N + +PV
Sbjct: 23 PGMQPPGMNPYGPPPVFQPPMLGRQPPQMNQPQMIPV 59
>UniRef50_UPI00015B4F8E Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 1045
Score = 31.5 bits (68), Expect = 8.1
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 243 QLAGSNPLGSPLGFAPPPDDRTKKSQNMTECVPV 344
+L GS+ +GSP G APPP + + +T +P+
Sbjct: 504 RLPGSDSVGSPSGAAPPPPPTRRDNPGLTLKIPL 537
>UniRef50_Q1YDX1 Cluster: Putative uncharacterized protein; n=1;
Aurantimonas sp. SI85-9A1|Rep: Putative uncharacterized
protein - Aurantimonas sp. SI85-9A1
Length = 734
Score = 31.5 bits (68), Expect = 8.1
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +3
Query: 207 AGSGAEHAEPGRQLAGSNPLGSPLGFAPPPDDRTKKSQNMTECVPVPSS 353
AG+GA AEP + A S+P P P D+T + T P +S
Sbjct: 117 AGTGAAKAEPSKPAATSSPAAKPAS-DPKASDKTGSAGAATAATPASAS 164
>UniRef50_Q60AI1 Cluster: Spermidine/putrescine import ATP-binding
protein potA; n=70; Proteobacteria|Rep:
Spermidine/putrescine import ATP-binding protein potA -
Methylococcus capsulatus
Length = 385
Score = 31.5 bits (68), Expect = 8.1
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +1
Query: 37 LKTIERTPSIIFLFSTSDREGNLSLIDKIA 126
LK ++R I F+F T DRE LS+ D+IA
Sbjct: 199 LKGLQRQTGITFVFVTHDREEALSMSDRIA 228
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 372,561,381
Number of Sequences: 1657284
Number of extensions: 6345926
Number of successful extensions: 23282
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 22034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23264
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21918499148
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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