Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0625
         (439 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    25   0.32 
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   0.96 
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        22   2.2  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    20   9.0  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    20   9.0  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    20   9.0  

>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 25.0 bits (52), Expect = 0.32
 Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = -1

Query: 301 SSGGGAN-PSGLPSGLLPASCRPGS 230
           +SGGGAN  + L   + PA+C P S
Sbjct: 124 TSGGGANLTNSLTGPVRPAACTPDS 148


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 23.4 bits (48), Expect = 0.96
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +2

Query: 56  PRLLFFYSVPVTERETSP 109
           PR+L ++ + +TE E+ P
Sbjct: 224 PRVLMYFDIFITEHESKP 241


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 10/25 (40%), Positives = 11/25 (44%)
 Frame = -1

Query: 307 VRSSGGGANPSGLPSGLLPASCRPG 233
           +R    GA    LP  LLP    PG
Sbjct: 325 LRRPSDGATSEALPFELLPLDSEPG 349


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +3

Query: 249 AGSNPLGSPLGFAPPPDDRTK 311
           A  + LGSP     PP D T+
Sbjct: 266 ASQHDLGSPSSGPAPPGDFTE 286


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = -3

Query: 89  SLVLNKKIIDGVRSIVLRCAFVHV 18
           S+  +K + DG+R   +   F H+
Sbjct: 486 SVACSKTVSDGIRHYYVNVTFPHL 509


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -1

Query: 361 TCSEDGTGTHSVMFCDFLVRSSGGG 287
           TC + G    + +F D + +  GGG
Sbjct: 636 TCEKCGNKIDTSLFVDHIRQCVGGG 660


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,990
Number of Sequences: 336
Number of extensions: 1434
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9775509
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)