Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0623
(765 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical pr... 146 2e-35
U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical pr... 146 2e-35
U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical pr... 146 2e-35
U56963-10|AAM97949.1| 353|Caenorhabditis elegans Temporarily as... 142 2e-34
U56963-9|AAB38126.2| 404|Caenorhabditis elegans Temporarily ass... 142 2e-34
Z81485-1|CAB03975.1| 403|Caenorhabditis elegans Hypothetical pr... 132 2e-31
AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical... 111 7e-25
AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical... 111 7e-25
U41009-5|AAO44915.1| 173|Caenorhabditis elegans Hypothetical pr... 99 3e-21
U41009-7|AAN84884.1| 51|Caenorhabditis elegans Hypothetical pr... 80 2e-15
U41009-6|AAK68167.2| 84|Caenorhabditis elegans Hypothetical pr... 44 9e-05
Z68222-10|CAA92505.3| 1701|Caenorhabditis elegans Hypothetical p... 30 1.6
Z68218-5|CAA92475.3| 1701|Caenorhabditis elegans Hypothetical pr... 30 1.6
AL132898-18|CAC14411.2| 417|Caenorhabditis elegans Hypothetical... 30 1.6
AF099920-2|AAL32226.2| 437|Caenorhabditis elegans Hypothetical ... 30 1.6
U61946-2|AAC24387.1| 341|Caenorhabditis elegans Serpentine rece... 29 4.8
Z81529-7|CAB04292.1| 248|Caenorhabditis elegans Hypothetical pr... 28 8.4
AF022973-11|AAK84524.3| 560|Caenorhabditis elegans Hypothetical... 28 8.4
>U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.1a protein.
Length = 404
Score = 146 bits (353), Expect = 2e-35
Identities = 69/106 (65%), Positives = 85/106 (80%), Gaps = 3/106 (2%)
Frame = +1
Query: 256 GEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDE 435
GEITSKA VDYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH +++ +
Sbjct: 57 GEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHVDKDSD 116
Query: 436 EVGAGDQGLMFGYATDETEECMPLM*CLH---TNSIRKLQSSGEME 564
+VGAGDQG+MFGYATDETEE MPL L + +L+ SGE+E
Sbjct: 117 DVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELE 162
Score = 114 bits (274), Expect = 7e-26
Identities = 54/84 (64%), Positives = 65/84 (77%)
Frame = +3
Query: 510 VVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGATVPQRVHTVVVSLQHSEKI 689
++L+HKLN+K+ ELRR+GE W RPDSKTQVT EY GGA VP RVHTVV+S QHS I
Sbjct: 142 LLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYASEGGACVPLRVHTVVISTQHSPDI 201
Query: 690 TLETLRDEIREKVIKEVIPAQYLD 761
+L+ LR E+ EKVIK VIPA +D
Sbjct: 202 SLDDLRKELIEKVIKAVIPANLID 225
Score = 99.1 bits (236), Expect = 3e-21
Identities = 43/50 (86%), Positives = 47/50 (94%)
Frame = +2
Query: 104 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLL 253
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVACET+TKTGM++L
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIML 55
>U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical
protein C06E7.3b protein.
Length = 353
Score = 146 bits (353), Expect = 2e-35
Identities = 69/106 (65%), Positives = 85/106 (80%), Gaps = 3/106 (2%)
Frame = +1
Query: 256 GEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDE 435
GEITSKA VDYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH +++ +
Sbjct: 6 GEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHVDKDSD 65
Query: 436 EVGAGDQGLMFGYATDETEECMPLM*CLH---TNSIRKLQSSGEME 564
+VGAGDQG+MFGYATDETEE MPL L + +L+ SGE+E
Sbjct: 66 DVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELE 111
Score = 114 bits (274), Expect = 7e-26
Identities = 54/84 (64%), Positives = 65/84 (77%)
Frame = +3
Query: 510 VVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGATVPQRVHTVVVSLQHSEKI 689
++L+HKLN+K+ ELRR+GE W RPDSKTQVT EY GGA VP RVHTVV+S QHS I
Sbjct: 91 LLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYASEGGACVPLRVHTVVISTQHSPDI 150
Query: 690 TLETLRDEIREKVIKEVIPAQYLD 761
+L+ LR E+ EKVIK VIPA +D
Sbjct: 151 SLDDLRKELIEKVIKAVIPANLID 174
>U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.3a protein.
Length = 404
Score = 146 bits (353), Expect = 2e-35
Identities = 69/106 (65%), Positives = 85/106 (80%), Gaps = 3/106 (2%)
Frame = +1
Query: 256 GEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDE 435
GEITSKA VDYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH +++ +
Sbjct: 57 GEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHVDKDSD 116
Query: 436 EVGAGDQGLMFGYATDETEECMPLM*CLH---TNSIRKLQSSGEME 564
+VGAGDQG+MFGYATDETEE MPL L + +L+ SGE+E
Sbjct: 117 DVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELE 162
Score = 114 bits (274), Expect = 7e-26
Identities = 54/84 (64%), Positives = 65/84 (77%)
Frame = +3
Query: 510 VVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGATVPQRVHTVVVSLQHSEKI 689
++L+HKLN+K+ ELRR+GE W RPDSKTQVT EY GGA VP RVHTVV+S QHS I
Sbjct: 142 LLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYASEGGACVPLRVHTVVISTQHSPDI 201
Query: 690 TLETLRDEIREKVIKEVIPAQYLD 761
+L+ LR E+ EKVIK VIPA +D
Sbjct: 202 SLDDLRKELIEKVIKAVIPANLID 225
Score = 99.1 bits (236), Expect = 3e-21
Identities = 43/50 (86%), Positives = 47/50 (94%)
Frame = +2
Query: 104 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLL 253
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVACET+TKTGM++L
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIML 55
>U56963-10|AAM97949.1| 353|Caenorhabditis elegans Temporarily
assigned gene nameprotein 32, isoform b protein.
Length = 353
Score = 142 bits (345), Expect = 2e-34
Identities = 69/106 (65%), Positives = 84/106 (79%), Gaps = 3/106 (2%)
Frame = +1
Query: 256 GEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDE 435
GEITSKA VDYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH +++
Sbjct: 6 GEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHVDKDIA 65
Query: 436 EVGAGDQGLMFGYATDETEECMPLM*CLH---TNSIRKLQSSGEME 564
+VGAGDQG+MFGYATDETEE MPL L + +L+ SGE+E
Sbjct: 66 DVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNYKLHELRRSGELE 111
Score = 111 bits (268), Expect = 4e-25
Identities = 54/84 (64%), Positives = 63/84 (75%)
Frame = +3
Query: 510 VVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGATVPQRVHTVVVSLQHSEKI 689
++L+HKLN K+ ELRR+GE W RPDSKTQVT EY GGA VP RVHTVV+S QHS I
Sbjct: 91 LLLSHKLNYKLHELRRSGELEWVRPDSKTQVTIEYSSEGGACVPLRVHTVVISTQHSPDI 150
Query: 690 TLETLRDEIREKVIKEVIPAQYLD 761
+LE LR E+ EKVIK VIP +D
Sbjct: 151 SLEDLRKELIEKVIKVVIPGNLID 174
>U56963-9|AAB38126.2| 404|Caenorhabditis elegans Temporarily
assigned gene nameprotein 32, isoform a protein.
Length = 404
Score = 142 bits (345), Expect = 2e-34
Identities = 69/106 (65%), Positives = 84/106 (79%), Gaps = 3/106 (2%)
Frame = +1
Query: 256 GEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDE 435
GEITSKA VDYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH +++
Sbjct: 57 GEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHVDKDIA 116
Query: 436 EVGAGDQGLMFGYATDETEECMPLM*CLH---TNSIRKLQSSGEME 564
+VGAGDQG+MFGYATDETEE MPL L + +L+ SGE+E
Sbjct: 117 DVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNYKLHELRRSGELE 162
Score = 111 bits (268), Expect = 4e-25
Identities = 54/84 (64%), Positives = 63/84 (75%)
Frame = +3
Query: 510 VVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGATVPQRVHTVVVSLQHSEKI 689
++L+HKLN K+ ELRR+GE W RPDSKTQVT EY GGA VP RVHTVV+S QHS I
Sbjct: 142 LLLSHKLNYKLHELRRSGELEWVRPDSKTQVTIEYSSEGGACVPLRVHTVVISTQHSPDI 201
Query: 690 TLETLRDEIREKVIKEVIPAQYLD 761
+LE LR E+ EKVIK VIP +D
Sbjct: 202 SLEDLRKELIEKVIKVVIPGNLID 225
Score = 99.1 bits (236), Expect = 3e-21
Identities = 43/50 (86%), Positives = 47/50 (94%)
Frame = +2
Query: 104 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLL 253
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVACET+TKTGM++L
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIML 55
>Z81485-1|CAB03975.1| 403|Caenorhabditis elegans Hypothetical
protein C49F5.1 protein.
Length = 403
Score = 132 bits (320), Expect = 2e-31
Identities = 60/84 (71%), Positives = 73/84 (86%)
Frame = +1
Query: 256 GEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDE 435
GEITSKA VDYQ +VR ++ IG+ DSS GFD+KTC+V++AL+QQSP IAAGVH N++ E
Sbjct: 56 GEITSKAVVDYQVLVRRVIEKIGFTDSSIGFDHKTCNVLVALEQQSPEIAAGVHVNKDGE 115
Query: 436 EVGAGDQGLMFGYATDETEECMPL 507
+VGAGDQG+MFGYATDETEE MPL
Sbjct: 116 DVGAGDQGIMFGYATDETEETMPL 139
Score = 105 bits (252), Expect = 3e-23
Identities = 50/84 (59%), Positives = 62/84 (73%)
Frame = +3
Query: 510 VVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGATVPQRVHTVVVSLQHSEKI 689
++L+HK+N ++ +LRRNG W RPDSK+QVT EY GAT+P RVHTVVVS QHS +
Sbjct: 141 LILSHKINAELHKLRRNGTLPWVRPDSKSQVTIEYESRHGATIPLRVHTVVVSTQHSPDV 200
Query: 690 TLETLRDEIREKVIKEVIPAQYLD 761
TLE LR+ I VIK+VIPA LD
Sbjct: 201 TLEKLRETILADVIKKVIPASLLD 224
Score = 101 bits (243), Expect = 4e-22
Identities = 45/52 (86%), Positives = 49/52 (94%)
Frame = +2
Query: 98 SVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLL 253
S FLFTSESV EGHPDKMCDQISDA+LDAHL QDP+AKVACET+TKTGMV+L
Sbjct: 3 SKFLFTSESVSEGHPDKMCDQISDAVLDAHLKQDPNAKVACETVTKTGMVML 54
>AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical
protein Y105C5B.12b protein.
Length = 363
Score = 111 bits (266), Expect = 7e-25
Identities = 52/84 (61%), Positives = 64/84 (76%)
Frame = +3
Query: 510 VVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGATVPQRVHTVVVSLQHSEKI 689
++L+HKLN+K+ ELRR+GE W RPDSKTQVT EY GGA +P RVHTVV+S QHS I
Sbjct: 101 LLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYASEGGACIPLRVHTVVISTQHSPDI 160
Query: 690 TLETLRDEIREKVIKEVIPAQYLD 761
+L+ LR E+ KVIK VIPA +D
Sbjct: 161 SLDDLRKELIVKVIKAVIPANLID 184
Score = 103 bits (248), Expect = 1e-22
Identities = 50/89 (56%), Positives = 66/89 (74%), Gaps = 6/89 (6%)
Frame = +1
Query: 316 HIGYDDSSK---GFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGLMFGYATDE 486
H+ D +K GFDYKTC+V++AL+QQSP IAAGVH +++ ++VGAGDQG+MFGYATDE
Sbjct: 33 HLAQDPHAKVACGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGIMFGYATDE 92
Query: 487 TEECMPLM*CLH---TNSIRKLQSSGEME 564
TEE MPL L + +L+ SGE+E
Sbjct: 93 TEEAMPLTLLLSHKLNRKLHELRRSGELE 121
Score = 82.6 bits (195), Expect = 3e-16
Identities = 41/59 (69%), Positives = 46/59 (77%), Gaps = 1/59 (1%)
Frame = +2
Query: 104 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLL-LAKSHPKL 277
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVAC KT VL+ L + P++
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACGFDYKTCNVLVALEQQSPEI 64
>AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical
protein Y105C5B.12a protein.
Length = 345
Score = 111 bits (266), Expect = 7e-25
Identities = 52/84 (61%), Positives = 64/84 (76%)
Frame = +3
Query: 510 VVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGATVPQRVHTVVVSLQHSEKI 689
++L+HKLN+K+ ELRR+GE W RPDSKTQVT EY GGA +P RVHTVV+S QHS I
Sbjct: 83 LLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYASEGGACIPLRVHTVVISTQHSPDI 142
Query: 690 TLETLRDEIREKVIKEVIPAQYLD 761
+L+ LR E+ KVIK VIPA +D
Sbjct: 143 SLDDLRKELIVKVIKAVIPANLID 166
Score = 107 bits (257), Expect = 9e-24
Identities = 50/84 (59%), Positives = 64/84 (76%), Gaps = 3/84 (3%)
Frame = +1
Query: 322 GYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGLMFGYATDETEECM 501
GY D GFDYKTC+V++AL+QQSP IAAGVH +++ ++VGAGDQG+MFGYATDETEE M
Sbjct: 20 GYFDYRNGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGIMFGYATDETEEAM 79
Query: 502 PLM*CLH---TNSIRKLQSSGEME 564
PL L + +L+ SGE+E
Sbjct: 80 PLTLLLSHKLNRKLHELRRSGELE 103
>U41009-5|AAO44915.1| 173|Caenorhabditis elegans Hypothetical
protein C06E7.1d protein.
Length = 173
Score = 99.1 bits (236), Expect = 3e-21
Identities = 43/50 (86%), Positives = 47/50 (94%)
Frame = +2
Query: 104 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLL 253
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVACET+TKTGM++L
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIML 55
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/30 (76%), Positives = 25/30 (83%)
Frame = +1
Query: 256 GEITSKANVDYQKVVRETVKHIGYDDSSKG 345
GEITSKA VDYQ +VR +K IGYDDSSKG
Sbjct: 57 GEITSKAVVDYQVLVRNVIKKIGYDDSSKG 86
Score = 31.5 bits (68), Expect = 0.68
Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
Frame = +2
Query: 149 MCDQI-SDAILDAH-LNQDPDAKVACETITKTGMVLLLAKSHPKLTWIIKKLCAKRSNIL 322
+C +I S A++D L ++ K+ + +K GM +++ H W+I LC + S+ L
Sbjct: 55 LCGEITSKAVVDYQVLVRNVIKKIGYDDSSK-GMKNIISFLH---YWLIT-LC-QESHFL 108
Query: 323 VMMIRPKAL----ITRHAV*CSH*TNNHQTLLLGCMRTEMTRKLGQETRA*CSVMQQMRQ 490
++I+ ITRHA+ H NNH LL T + E + C M M+
Sbjct: 109 GLLIKYSIQFQDSITRHAMFLLHSNNNHLKSLLESTWTRIVTMSEPEIKELCLDMLLMKP 168
Query: 491 KNAC 502
K C
Sbjct: 169 KKRC 172
>U41009-7|AAN84884.1| 51|Caenorhabditis elegans Hypothetical
protein C06E7.1c protein.
Length = 51
Score = 79.8 bits (188), Expect = 2e-15
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = +2
Query: 104 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVAC 220
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVAC
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVAC 44
>U41009-6|AAK68167.2| 84|Caenorhabditis elegans Hypothetical
protein C06E7.1b protein.
Length = 84
Score = 44.4 bits (100), Expect = 9e-05
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2
Query: 104 FLFTSESVGEGHPDKMCDQ 160
FLFTSESV EGHPDKMCDQ
Sbjct: 6 FLFTSESVSEGHPDKMCDQ 24
>Z68222-10|CAA92505.3| 1701|Caenorhabditis elegans Hypothetical
protein ZK1251.9 protein.
Length = 1701
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = -1
Query: 291 LIIHVSFGCDFANKSTIPVLVMVSHATFASGS*FRCASRIA 169
L++H F +F NK IP L+ V + AS C IA
Sbjct: 376 LLVHRKFALEFVNKGGIPALLKVPKTSLASVGVVTCLYYIA 416
>Z68218-5|CAA92475.3| 1701|Caenorhabditis elegans Hypothetical
protein ZK1251.9 protein.
Length = 1701
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = -1
Query: 291 LIIHVSFGCDFANKSTIPVLVMVSHATFASGS*FRCASRIA 169
L++H F +F NK IP L+ V + AS C IA
Sbjct: 376 LLVHRKFALEFVNKGGIPALLKVPKTSLASVGVVTCLYYIA 416
>AL132898-18|CAC14411.2| 417|Caenorhabditis elegans Hypothetical
protein Y59A8B.13 protein.
Length = 417
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = +2
Query: 245 VLLLAKSHPKLTWIIKKLCAKRSNIL---VMMIRPKALITRH 361
V++ PK+ W ++K+C K+ +I + I P+ L+T H
Sbjct: 245 VVICRNDEPKIVWHLEKMCNKKEDISRGNPVSIPPQRLLTHH 286
>AF099920-2|AAL32226.2| 437|Caenorhabditis elegans Hypothetical
protein H06H21.6 protein.
Length = 437
Score = 30.3 bits (65), Expect = 1.6
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +2
Query: 107 LFTSESVGEGHPDKMCDQISDA--ILDAHLNQDPDAKVACETITKTGMVLLLAKSHPKLT 280
L+TSE +GE H D + D L +++ D + I M+ L K HPK T
Sbjct: 123 LYTSELLGEHHIRSKADLLEDIKNFLSDQISEADDEN--DKVIAAVLMLYSLNKKHPKET 180
Query: 281 WIIKKLCAKRSNIL 322
I+ +C NIL
Sbjct: 181 -AIETICKYCQNIL 193
>U61946-2|AAC24387.1| 341|Caenorhabditis elegans Serpentine
receptor, class h protein220 protein.
Length = 341
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +1
Query: 595 HRLLANMYLLVVQQSHREFIL*SC 666
H L++ + +LVVQ+ +REFI SC
Sbjct: 287 HGLVSTLVMLVVQKPYREFISKSC 310
>Z81529-7|CAB04292.1| 248|Caenorhabditis elegans Hypothetical
protein F35E8.9 protein.
Length = 248
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/56 (30%), Positives = 23/56 (41%)
Frame = -3
Query: 661 TTV*TLCGTVAPPANTYSQVTCVFESGLAHQNSPFRLSSAIF*LSLCASTTSTACI 494
TT V T +Q TC GL Q S + + + CAS T++ CI
Sbjct: 80 TTATATPAAVVQDMKTAAQSTCPRTCGLCCQTSAYSCPNVAYPRLNCASITASQCI 135
>AF022973-11|AAK84524.3| 560|Caenorhabditis elegans Hypothetical
protein F25G6.1 protein.
Length = 560
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = +1
Query: 493 ECMPLM*CLHTNSIRKLQSSGEMENFGGQDQIQKHRLLANMYLLVVQQSHREFIL*SCHC 672
EC M L +R+ ++ ENF G + + H+ + L++ H E ++ C
Sbjct: 450 ECASAMAKLLGGHLRQFSTNNISENFNGYVKCKLHKQMTIDKLILKLNEHCEDVIVQCFL 509
Query: 673 NTL 681
+T+
Sbjct: 510 STI 512
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,667,263
Number of Sequences: 27780
Number of extensions: 461025
Number of successful extensions: 1348
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1348
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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