Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0621
         (738 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    37   2e-04
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    25   0.48 
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    25   0.48 
AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase l...    25   0.48 
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     25   0.84 
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    25   0.84 
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           25   0.84 
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    23   3.4  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    22   4.5  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   7.9  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   7.9  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    21   7.9  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 36.7 bits (81), Expect = 2e-04
 Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = +3

Query: 372 TALEGTVCEPTLL-GIKDMGFITMTEIQAKAIPPLLEGRDLVGAAKTALEK 521
           T+ E +   P LL  +K  G+   T IQ  AIP +L GRDL+  A+T   K
Sbjct: 158 TSFETSGLRPHLLENVKKSGYTKPTAIQKYAIPVILSGRDLMSCAQTGSGK 208



 Score = 29.5 bits (63), Expect = 0.030
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
 Frame = +2

Query: 518 KTLAFLIPAIDLIYKLKFKPRNGTG-----VIILSPTRELSMQ 631
           KT AF++P I  +   K  P          V+I+SPTREL++Q
Sbjct: 208 KTAAFMLPIIHNLLSDKNPPNTENNCAQPVVVIMSPTRELAIQ 250


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 25.4 bits (53), Expect = 0.48
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 625 NANIWRSHGIDEIPPPYIWSGNGW 696
           NA  W +   DE   PY++ GN W
Sbjct: 311 NAGGWTTVWDDEQKTPYMYKGNQW 334


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 25.4 bits (53), Expect = 0.48
 Identities = 17/49 (34%), Positives = 22/49 (44%)
 Frame = -3

Query: 688 YQTICMVVVFHQFHENAKCLH**LSCG*QNDDSSTISWFKF*FVYKVYS 542
           +QT   VV+F QF      LH       +N     + W  F FVY VY+
Sbjct: 30  HQTFSFVVIFGQFF-GIMPLH---GVSRKNVQEIRLEWKSFRFVYAVYN 74


>AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase like
           protein E3 protein.
          Length = 138

 Score = 25.4 bits (53), Expect = 0.48
 Identities = 16/58 (27%), Positives = 26/58 (44%)
 Frame = -1

Query: 669 WWYFINSMRTPNVCIDNSLVGDKMMTPVPFLGLNFNLYIRSIAGIKNASVFPEPFWQH 496
           W   +++ +  NVC    L   K+      L LN  +Y R+I    + S++P   W H
Sbjct: 25  WEGVLDATKPGNVCYQRDLFRQKITGSENCLVLN--VYTRNIPDGIHTSLYPVLVWIH 80


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +3

Query: 252 RSSDDSQDEQDTKEDDSEKKSNND 323
           R  D + DEQD  +D     +NND
Sbjct: 174 RLEDANSDEQDDGDDGQGSSTNND 197


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +3

Query: 252 RSSDDSQDEQDTKEDDSEKKSNND 323
           R  D + DEQD  +D     +NND
Sbjct: 174 RLEDANSDEQDDGDDGQGSSTNND 197


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +3

Query: 252 RSSDDSQDEQDTKEDDSEKKSNND 323
           R  D + DEQD  +D     +NND
Sbjct: 174 RLEDANSDEQDDGDDGQGSSTNND 197


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +1

Query: 466 LLCWKAGILWVLPKRLWK-NTSILNTGYR 549
           L+C K G LW  P  + K ++++L   YR
Sbjct: 63  LVCGKYGALWPQPTSVTKISSTLLKFPYR 91


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +1

Query: 79  KTDSNPEPEKDIEALNNEKEAKKRVVQDGDTNG 177
           K   N  P     +L   K +K+    +GDTNG
Sbjct: 57  KNPPNLNPAVQGSSLTEGKRSKRSKRPNGDTNG 89


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = -1

Query: 690 ITRPYVWWWYFINSMRTPNVCIDNSLVGDKMMTPV 586
           + R Y +W +    +RT  +C+    V D+   P+
Sbjct: 317 LERIYFYWSFGFLIVRTVCLCLFGGKVNDESTQPM 351


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = -1

Query: 690 ITRPYVWWWYFINSMRTPNVCIDNSLVGDKMMTPV 586
           + R Y +W +    +RT  +C+    V D+   P+
Sbjct: 317 LERIYFYWSFGFLIVRTVCLCLFGGKVNDESTQPM 351


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = -1

Query: 366 FDLIVYLSRGLIQVNRCSIFFPNHLL 289
           FD++VY+  G       S + P++ +
Sbjct: 112 FDVVVYIHSGAFMTGYGSFYQPDYFI 137


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,743
Number of Sequences: 336
Number of extensions: 2896
Number of successful extensions: 20
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)