BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0621 (738 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomy... 105 9e-24 SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomy... 65 1e-11 SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1 |Schizosacch... 46 7e-06 SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomy... 45 1e-05 SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10 |Schizosac... 42 9e-05 SPCC10H11.01 |prp11||ATP-dependent RNA helicase Prp11|Schizosacc... 39 6e-04 SPBC776.09 |ste13||ATP-dependent RNA helicase Ste13|Schizosaccha... 38 0.002 SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3 |Schizosaccha... 38 0.002 SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomy... 36 0.005 SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116 |S... 36 0.008 SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomy... 33 0.056 SPBP8B7.16c |dbp2||ATP-dependent RNA helicase Dbp2|Schizosacchar... 33 0.056 SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1 |Schizosacch... 30 0.30 SPCC1494.06c |||ATP-dependent RNA helicase Dbp9 |Schizosaccharom... 30 0.40 SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8 |Schizosaccha... 30 0.40 SPCC63.11 |prp28||U5 snRNP-associated protein Prp28 |Schizosacch... 30 0.40 SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase Su... 30 0.40 SPAC1006.07 |||translation initiation factor eIF4A|Schizosacchar... 29 0.91 SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces pomb... 27 2.1 SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyc... 27 2.1 SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A related|Schizosa... 27 2.1 SPBC3B8.04c |||membrane transporter|Schizosaccharomyces pombe|ch... 27 2.8 SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces pombe... 26 4.9 SPAC17C9.07 |alg8||glucosyltransferase Alg8|Schizosaccharomyces ... 25 8.5 SPCC965.14c |||cytosine deaminase |Schizosaccharomyces pombe|chr... 25 8.5 SPCC1827.07c ||SPCP1E11.01c|SPX/EXS domain protein|Schizosacchar... 25 8.5 SPCC1393.08 |||transcription factor, zf-GATA type |Schizosacchar... 25 8.5 SPAC4H3.03c |||glucan 1,4-alpha-glucosidase |Schizosaccharomyces... 25 8.5 SPBPB10D8.02c |||arylsulfatase |Schizosaccharomyces pombe|chr 2|... 25 8.5 >SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 578 Score = 105 bits (251), Expect = 9e-24 Identities = 45/61 (73%), Positives = 55/61 (90%) Frame = +2 Query: 518 KTLAFLIPAIDLIYKLKFKPRNGTGVIILSPTRELSMQTFGVLMELMKYHHHTYGLVMGG 697 KTLAFLIP I+++Y LKFKPRNGTGVII+SPTREL++Q FGV EL+KYHH T+G+V+GG Sbjct: 139 KTLAFLIPTIEMLYALKFKPRNGTGVIIISPTRELALQIFGVAKELLKYHHQTFGIVIGG 198 Query: 698 A 700 A Sbjct: 199 A 199 Score = 60.5 bits (140), Expect = 2e-10 Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 1/83 (1%) Frame = +3 Query: 276 EQDTKEDDSEKKSNNDLPGSSLCLGILSD-QKFTALEGTVCEPTLLGIKDMGFITMTEIQ 452 E +++E D+E + +L SD +KF+ L+ + E IK+MGF TMTEIQ Sbjct: 59 ESESEELDNENEDERVQKSVNLNASSTSDIEKFSDLQ--LSENIQKAIKEMGFETMTEIQ 116 Query: 453 AKAIPPLLEGRDLVGAAKTALEK 521 ++IPPLL GRD++GAAKT K Sbjct: 117 KRSIPPLLAGRDVLGAAKTGSGK 139 >SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomyces pombe|chr 1|||Manual Length = 735 Score = 64.9 bits (151), Expect = 1e-11 Identities = 26/60 (43%), Positives = 45/60 (75%) Frame = +2 Query: 518 KTLAFLIPAIDLIYKLKFKPRNGTGVIILSPTRELSMQTFGVLMELMKYHHHTYGLVMGG 697 KTLAF++P I+ +Y+ K+ +G G +++SPTREL++QTF L+++ + H + GL++GG Sbjct: 89 KTLAFIVPLIENLYRKKWTSLDGLGALVISPTRELAIQTFETLVKIGRLHSFSAGLIIGG 148 Score = 48.8 bits (111), Expect = 8e-07 Identities = 30/91 (32%), Positives = 51/91 (56%) Frame = +3 Query: 249 GRSSDDSQDEQDTKEDDSEKKSNNDLPGSSLCLGILSDQKFTALEGTVCEPTLLGIKDMG 428 GRS + + ++ +E++ E+ ++ + LS+ E + +PT +K+ Sbjct: 7 GRSREAREKKRKEEEEEIEELNSQ--------IEALSETVDHFAELPLTQPTKSALKNAH 58 Query: 429 FITMTEIQAKAIPPLLEGRDLVGAAKTALEK 521 FIT+TEIQ + IP L+GRD++GAAKT K Sbjct: 59 FITLTEIQKQCIPSALKGRDILGAAKTGSGK 89 >SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 754 Score = 45.6 bits (103), Expect = 7e-06 Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 1/90 (1%) Frame = +3 Query: 255 SSDDSQDEQDTKEDDSE-KKSNNDLPGSSLCLGILSDQKFTALEGTVCEPTLLGIKDMGF 431 +SD + D++ED+ E K N +++ + + P L G+ ++GF Sbjct: 220 NSDSAAGSSDSEEDEEEIAKKNAFFAEGDKEKSMMTTTHSSFQSMNLSRPILKGLSNLGF 279 Query: 432 ITMTEIQAKAIPPLLEGRDLVGAAKTALEK 521 T+IQ K IP L G+D+VGAA T K Sbjct: 280 EVPTQIQDKTIPLALLGKDIVGAAVTGSGK 309 Score = 41.1 bits (92), Expect = 2e-04 Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 1/69 (1%) Frame = +2 Query: 518 KTLAFLIPAID-LIYKLKFKPRNGTGVIILSPTRELSMQTFGVLMELMKYHHHTYGLVMG 694 KT AF++P ++ L+Y+ K P T V+IL PTREL+MQ V ++ + L +G Sbjct: 309 KTAAFIVPILERLLYRPKKVPT--TRVLILCPTRELAMQCHSVATKIASFTDIMVCLCIG 366 Query: 695 GATEVLKLR 721 G + LKL+ Sbjct: 367 GLS--LKLQ 373 >SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomyces pombe|chr 2|||Manual Length = 606 Score = 44.8 bits (101), Expect = 1e-05 Identities = 21/49 (42%), Positives = 31/49 (63%) Frame = +2 Query: 518 KTLAFLIPAIDLIYKLKFKPRNGTGVIILSPTRELSMQTFGVLMELMKY 664 KTLA+L+P D + + + G G +I++PTREL+ Q F V EL+ Y Sbjct: 51 KTLAYLLPCFDKVTR-RDTDETGLGALIVAPTRELATQIFNVTKELLAY 98 Score = 30.7 bits (66), Expect = 0.23 Identities = 16/32 (50%), Positives = 19/32 (59%) Frame = +3 Query: 426 GFITMTEIQAKAIPPLLEGRDLVGAAKTALEK 521 GF MT +QA AIP L+ +DLV A T K Sbjct: 20 GFKKMTPVQANAIPLFLKNKDLVVEAVTGSGK 51 >SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10 |Schizosaccharomyces pombe|chr 1|||Manual Length = 848 Score = 41.9 bits (94), Expect = 9e-05 Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 1/91 (1%) Frame = +3 Query: 252 RSSDDSQDEQDTKEDDSEKKSNNDLPGSSLCLGILSDQKFTALEGTVCEPTLL-GIKDMG 428 + ++ E + EDD ++ L + G + K + + TLL I G Sbjct: 29 KDKHENVGENVSDEDDGNYIASKLLESNRRTKGKKGNGKASNFQSMGLNQTLLRAIFKKG 88 Query: 429 FITMTEIQAKAIPPLLEGRDLVGAAKTALEK 521 F T IQ K IP LLEGRD+VG A+T K Sbjct: 89 FKAPTPIQRKTIPLLLEGRDVVGMARTGSGK 119 Score = 34.7 bits (76), Expect = 0.014 Identities = 21/62 (33%), Positives = 33/62 (53%) Frame = +2 Query: 518 KTLAFLIPAIDLIYKLKFKPRNGTGVIILSPTRELSMQTFGVLMELMKYHHHTYGLVMGG 697 KT AF+IP I+ + + T +ILSP REL++QT V+ + K ++GG Sbjct: 119 KTAAFVIPMIEHLKSTL--ANSNTRALILSPNRELALQTVKVVKDFSKGTDLRSVAIVGG 176 Query: 698 AT 703 + Sbjct: 177 VS 178 >SPCC10H11.01 |prp11||ATP-dependent RNA helicase Prp11|Schizosaccharomyces pombe|chr 3|||Manual Length = 1014 Score = 39.1 bits (87), Expect = 6e-04 Identities = 18/40 (45%), Positives = 25/40 (62%) Frame = +3 Query: 402 TLLGIKDMGFITMTEIQAKAIPPLLEGRDLVGAAKTALEK 521 T+ I +G+ T IQA+AIP + GRD++G AKT K Sbjct: 429 TISVINSLGYEKPTSIQAQAIPAITSGRDVIGVAKTGSGK 468 Score = 33.5 bits (73), Expect = 0.032 Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Frame = +2 Query: 518 KTLAFLIPAIDLIYKLK-FKPRNGTGVIILSPTRELSMQTFGVLMELMKYHHHTYGLVMG 694 KT+AFL+P I + K G II++PTREL++Q F +K + G Sbjct: 468 KTIAFLLPMFRHIKDQRPLKTGEGPIAIIMTPTRELAVQIFRECKPFLKLLNIRACCAYG 527 Query: 695 GA 700 GA Sbjct: 528 GA 529 >SPBC776.09 |ste13||ATP-dependent RNA helicase Ste13|Schizosaccharomyces pombe|chr 2|||Manual Length = 485 Score = 37.5 bits (83), Expect = 0.002 Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 3/76 (3%) Frame = +2 Query: 518 KTLAFLIPAIDLIYKLKFKPRNGTGVIILSPTRELSMQTFGVLMELMKYHHHTYGLVMGG 697 KT AF+IP+++ + K K + +IL PTREL++QT V L K+ + + GG Sbjct: 94 KTAAFVIPSLEKVDTKKSKIQT----LILVPTRELALQTSQVCKTLGKHMNVKVMVTTGG 149 Query: 698 AT---EVLKLRNSLKV 736 T ++++L +++ + Sbjct: 150 TTLRDDIIRLNDTVHI 165 Score = 32.7 bits (71), Expect = 0.056 Identities = 16/39 (41%), Positives = 23/39 (58%) Frame = +3 Query: 405 LLGIKDMGFITMTEIQAKAIPPLLEGRDLVGAAKTALEK 521 L+GI + GF + IQ ++IP L GRD++ AK K Sbjct: 56 LMGIFEAGFERPSPIQEESIPIALSGRDILARAKNGTGK 94 >SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3 |Schizosaccharomyces pombe|chr 2|||Manual Length = 578 Score = 37.5 bits (83), Expect = 0.002 Identities = 23/61 (37%), Positives = 38/61 (62%) Frame = +2 Query: 518 KTLAFLIPAIDLIYKLKFKPRNGTGVIILSPTRELSMQTFGVLMELMKYHHHTYGLVMGG 697 KT+AF IPA+ + L ++ V+++SPTREL++QT+ L L++ + +V GG Sbjct: 215 KTVAFGIPALQYLNGLSDN-KSVPRVLVVSPTRELAIQTYENLNSLIQGTNLKAVVVYGG 273 Query: 698 A 700 A Sbjct: 274 A 274 Score = 29.1 bits (62), Expect = 0.69 Identities = 15/27 (55%), Positives = 17/27 (62%) Frame = +3 Query: 441 TEIQAKAIPPLLEGRDLVGAAKTALEK 521 T IQA P LL GRD+VG A+T K Sbjct: 189 TPIQAATWPYLLAGRDVVGIAETGSGK 215 >SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomyces pombe|chr 1|||Manual Length = 465 Score = 36.3 bits (80), Expect = 0.005 Identities = 24/85 (28%), Positives = 43/85 (50%) Frame = +3 Query: 267 SQDEQDTKEDDSEKKSNNDLPGSSLCLGILSDQKFTALEGTVCEPTLLGIKDMGFITMTE 446 + + + E+++ NN+ P + LG++ + +CE + +GF T T Sbjct: 25 NSSSEKSSENNNGDSQNNEAPKTFKELGVIDE---------LCE----ACEKLGFKTPTP 71 Query: 447 IQAKAIPPLLEGRDLVGAAKTALEK 521 IQ +AIP +L RD++G A+T K Sbjct: 72 IQQEAIPVVLNKRDVIGLAQTGSGK 96 >SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116 |Schizosaccharomyces pombe|chr 2|||Manual Length = 535 Score = 35.5 bits (78), Expect = 0.008 Identities = 23/43 (53%), Positives = 30/43 (69%), Gaps = 3/43 (6%) Frame = +2 Query: 518 KTLAFLIPAIDLIYKLKFKPR-NGTGV--IILSPTRELSMQTF 637 KTLAFL+ A + LK KPR N + + +ILSPTREL++Q F Sbjct: 89 KTLAFLLVAFKDV--LKGKPRLNSSKIHSVILSPTRELALQIF 129 >SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomyces pombe|chr 2|||Manual Length = 709 Score = 32.7 bits (71), Expect = 0.056 Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 3/49 (6%) Frame = +2 Query: 518 KTLAFLIPAIDLIYKLK---FKPRNGTGVIILSPTRELSMQTFGVLMEL 655 KTLA+L+P + + +L +G +I++PTREL Q + V +L Sbjct: 191 KTLAYLLPIVQRLIRLPKNLHTRTSGIYAVIMAPTRELCQQIYNVANKL 239 >SPBP8B7.16c |dbp2||ATP-dependent RNA helicase Dbp2|Schizosaccharomyces pombe|chr 2|||Manual Length = 550 Score = 32.7 bits (71), Expect = 0.056 Identities = 15/36 (41%), Positives = 21/36 (58%) Frame = +3 Query: 414 IKDMGFITMTEIQAKAIPPLLEGRDLVGAAKTALEK 521 +K +GF T IQ +A P + GRD+VG + T K Sbjct: 137 VKQLGFEAPTPIQQQAWPMAMSGRDMVGISATGSGK 172 Score = 31.9 bits (69), Expect = 0.098 Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 1/39 (2%) Frame = +2 Query: 518 KTLAFLIPAIDLIYKLKF-KPRNGTGVIILSPTRELSMQ 631 KTL++ +PAI I P +G V++L+PTREL++Q Sbjct: 172 KTLSYCLPAIVHINAQPLLSPGDGPIVLVLAPTRELAVQ 210 >SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 481 Score = 30.3 bits (65), Expect = 0.30 Identities = 16/40 (40%), Positives = 24/40 (60%) Frame = +2 Query: 518 KTLAFLIPAIDLIYKLKFKPRNGTGVIILSPTRELSMQTF 637 KT+A+L P ++ KL+ G II++PTREL Q + Sbjct: 96 KTIAYLFP---ILQKLQLHVPGGYRAIIVAPTRELCEQIY 132 Score = 26.6 bits (56), Expect = 3.7 Identities = 17/47 (36%), Positives = 21/47 (44%) Frame = +3 Query: 381 EGTVCEPTLLGIKDMGFITMTEIQAKAIPPLLEGRDLVGAAKTALEK 521 EG +CE +K T IQ AIP + RDL+ A T K Sbjct: 54 EGILCE----NLKKQNITECTTIQRYAIPTIGSKRDLLACAPTGSGK 96 >SPCC1494.06c |||ATP-dependent RNA helicase Dbp9 |Schizosaccharomyces pombe|chr 3|||Manual Length = 595 Score = 29.9 bits (64), Expect = 0.40 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = +3 Query: 441 TEIQAKAIPPLLEGRDLVGAAKTALEK 521 T +Q++ IP LEG+DLV A+T K Sbjct: 38 TSVQSETIPLALEGKDLVAQARTGSGK 64 >SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8 |Schizosaccharomyces pombe|chr 2|||Manual Length = 453 Score = 29.9 bits (64), Expect = 0.40 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = +3 Query: 414 IKDMGFITMTEIQAKAIPPLLEGRDLVGAAKTALEK 521 +K + T+IQ I +LEGR+ +G AKT K Sbjct: 22 LKALAIYEPTDIQEGVIAQILEGRNCIGGAKTGSGK 57 Score = 29.5 bits (63), Expect = 0.52 Identities = 21/60 (35%), Positives = 32/60 (53%) Frame = +2 Query: 518 KTLAFLIPAIDLIYKLKFKPRNGTGVIILSPTRELSMQTFGVLMELMKYHHHTYGLVMGG 697 KT AF +P I+ K P +G +IL+PTREL++Q L + + L++GG Sbjct: 57 KTAAFALPIIE---KWSKDP-SGIFALILTPTRELAIQIDEQFAALGANLNLKHALIVGG 112 >SPCC63.11 |prp28||U5 snRNP-associated protein Prp28 |Schizosaccharomyces pombe|chr 3|||Manual Length = 662 Score = 29.9 bits (64), Expect = 0.40 Identities = 14/36 (38%), Positives = 22/36 (61%) Frame = +3 Query: 414 IKDMGFITMTEIQAKAIPPLLEGRDLVGAAKTALEK 521 +K + + + IQ AIP LL+ +DL+G A+T K Sbjct: 264 LKKVNYKEPSSIQRAAIPVLLQRKDLIGIAETGSGK 299 Score = 29.9 bits (64), Expect = 0.40 Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 4/42 (9%) Frame = +2 Query: 518 KTLAFLIPAIDLIYKL----KFKPRNGTGVIILSPTRELSMQ 631 KT AF+IP I I KL + G ++L+PTREL+ Q Sbjct: 299 KTAAFIIPLIIAISKLPPLTESNMHLGPYAVVLAPTRELAQQ 340 >SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase Sum3|Schizosaccharomyces pombe|chr 3|||Manual Length = 636 Score = 29.9 bits (64), Expect = 0.40 Identities = 15/39 (38%), Positives = 21/39 (53%) Frame = +3 Query: 405 LLGIKDMGFITMTEIQAKAIPPLLEGRDLVGAAKTALEK 521 L IK G+ T +Q +IP + GRDL+ A+T K Sbjct: 181 LQNIKLSGYTQPTPVQKNSIPIVTSGRDLMACAQTGSGK 219 >SPAC1006.07 |||translation initiation factor eIF4A|Schizosaccharomyces pombe|chr 1|||Manual Length = 392 Score = 28.7 bits (61), Expect = 0.91 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Frame = +3 Query: 360 DQKFTALEGTVCEPTLL-GIKDMGFITMTEIQAKAIPPLLEGRDLVGAAKTALEK 521 D+ + +P LL GI GF + IQ +AI P+L RD++ A++ K Sbjct: 15 DEVIDTFDDMNLKPELLRGIYAYGFERPSAIQQRAIMPILGERDVLAQAQSGTGK 69 >SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces pombe|chr 3|||Manual Length = 394 Score = 27.5 bits (58), Expect = 2.1 Identities = 11/28 (39%), Positives = 20/28 (71%) Frame = +3 Query: 258 SDDSQDEQDTKEDDSEKKSNNDLPGSSL 341 SDD +DE+ + +++ E+ S+ +L SSL Sbjct: 231 SDDEEDEEGSADEEDEEDSDVELSESSL 258 >SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyces pombe|chr 2|||Manual Length = 503 Score = 27.5 bits (58), Expect = 2.1 Identities = 17/49 (34%), Positives = 26/49 (53%) Frame = +2 Query: 518 KTLAFLIPAIDLIYKLKFKPRNGTGVIILSPTRELSMQTFGVLMELMKY 664 KT AF + + + KP+ I L+P+REL+ Q V+ E+ KY Sbjct: 166 KTAAFALTMLSRVDASVPKPQ----AICLAPSRELARQIMDVVTEMGKY 210 >SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A related|Schizosaccharomyces pombe|chr 1|||Manual Length = 394 Score = 27.5 bits (58), Expect = 2.1 Identities = 16/54 (29%), Positives = 30/54 (55%) Frame = +2 Query: 542 AIDLIYKLKFKPRNGTGVIILSPTRELSMQTFGVLMELMKYHHHTYGLVMGGAT 703 +I ++ + R+ T +ILSPTREL++Q V++ L + + +GG + Sbjct: 76 SIGILQSIDLSVRD-TQALILSPTRELAVQIQNVVLALGDHMNVQCHACIGGTS 128 >SPBC3B8.04c |||membrane transporter|Schizosaccharomyces pombe|chr 2|||Manual Length = 867 Score = 27.1 bits (57), Expect = 2.8 Identities = 9/21 (42%), Positives = 14/21 (66%) Frame = +3 Query: 261 DDSQDEQDTKEDDSEKKSNND 323 DD D++D ED+ E +NN+ Sbjct: 207 DDDDDDEDEDEDEDEDNNNNN 227 >SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces pombe|chr 2|||Manual Length = 516 Score = 26.2 bits (55), Expect = 4.9 Identities = 13/39 (33%), Positives = 21/39 (53%) Frame = +3 Query: 288 KEDDSEKKSNNDLPGSSLCLGILSDQKFTALEGTVCEPT 404 ++DD E++ LP SL L ++ + +E V EPT Sbjct: 130 EQDDLEREEMQILPTDSLLLAARTEDNLSHVEVYVYEPT 168 >SPAC17C9.07 |alg8||glucosyltransferase Alg8|Schizosaccharomyces pombe|chr 1|||Manual Length = 501 Score = 25.4 bits (53), Expect = 8.5 Identities = 14/37 (37%), Positives = 18/37 (48%) Frame = -2 Query: 491 KIPAFQQRRYSFSLNLCHRYKAHIFNS*KSWFAHCAF 381 +IP R + FS LCH Y A F + S+ AF Sbjct: 243 QIPQLLSRLFPFSRGLCHAYWAPNFWALYSFVDRVAF 279 >SPCC965.14c |||cytosine deaminase |Schizosaccharomyces pombe|chr 3|||Manual Length = 162 Score = 25.4 bits (53), Expect = 8.5 Identities = 10/38 (26%), Positives = 20/38 (52%) Frame = +3 Query: 405 LLGIKDMGFITMTEIQAKAIPPLLEGRDLVGAAKTALE 518 + G+ + I +T+ + P + RD++GAA +E Sbjct: 103 IFGLSNENLIKLTQKSGECPPLYINSRDILGAASHPIE 140 >SPCC1827.07c ||SPCP1E11.01c|SPX/EXS domain protein|Schizosaccharomyces pombe|chr 3|||Manual Length = 682 Score = 25.4 bits (53), Expect = 8.5 Identities = 9/35 (25%), Positives = 17/35 (48%) Frame = +1 Query: 454 LKLYLLCWKAGILWVLPKRLWKNTSILNTGYRPYI 558 + L C + + L KRLW+ + N+ + P + Sbjct: 434 VSLTYACGNISLFFCLYKRLWRQPQLCNSSHSPLL 468 >SPCC1393.08 |||transcription factor, zf-GATA type |Schizosaccharomyces pombe|chr 3|||Manual Length = 557 Score = 25.4 bits (53), Expect = 8.5 Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 4/69 (5%) Frame = -1 Query: 666 WYFINSMRTPNV--CID--NSLVGDKMMTPVPFLGLNFNLYIRSIAGIKNASVFPEPFWQ 499 W ++SM N C D ++ +GD + L N ++ I +++ K + P P + Sbjct: 107 WSLLDSMDFDNQRQCSDLESAQLGDSGLLKSTILS-NSHIDIAALSSSKTSE--PTPPFS 163 Query: 498 HPQDPCLPT 472 + Q PC+PT Sbjct: 164 YVQTPCIPT 172 >SPAC4H3.03c |||glucan 1,4-alpha-glucosidase |Schizosaccharomyces pombe|chr 1|||Manual Length = 649 Score = 25.4 bits (53), Expect = 8.5 Identities = 10/17 (58%), Positives = 14/17 (82%) Frame = -3 Query: 511 AVLAAPTRSLPSNKGGI 461 AV+A+PT SLP + GG+ Sbjct: 278 AVIASPTFSLPEDLGGV 294 >SPBPB10D8.02c |||arylsulfatase |Schizosaccharomyces pombe|chr 2|||Manual Length = 554 Score = 25.4 bits (53), Expect = 8.5 Identities = 9/21 (42%), Positives = 12/21 (57%) Frame = +1 Query: 673 YIWSGNGWCNRSTEAQKLSKG 735 +IW G W +T +LSKG Sbjct: 363 FIWYGPRWAQAATAPSRLSKG 383 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,517,293 Number of Sequences: 5004 Number of extensions: 47886 Number of successful extensions: 210 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 181 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 206 length of database: 2,362,478 effective HSP length: 71 effective length of database: 2,007,194 effective search space used: 349251756 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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