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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0621
         (738 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomy...   105   9e-24
SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomy...    65   1e-11
SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1 |Schizosacch...    46   7e-06
SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomy...    45   1e-05
SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10 |Schizosac...    42   9e-05
SPCC10H11.01 |prp11||ATP-dependent RNA helicase Prp11|Schizosacc...    39   6e-04
SPBC776.09 |ste13||ATP-dependent RNA helicase Ste13|Schizosaccha...    38   0.002
SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3 |Schizosaccha...    38   0.002
SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomy...    36   0.005
SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116 |S...    36   0.008
SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomy...    33   0.056
SPBP8B7.16c |dbp2||ATP-dependent RNA helicase Dbp2|Schizosacchar...    33   0.056
SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1 |Schizosacch...    30   0.30 
SPCC1494.06c |||ATP-dependent RNA helicase Dbp9 |Schizosaccharom...    30   0.40 
SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8 |Schizosaccha...    30   0.40 
SPCC63.11 |prp28||U5 snRNP-associated protein Prp28 |Schizosacch...    30   0.40 
SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase Su...    30   0.40 
SPAC1006.07 |||translation initiation factor eIF4A|Schizosacchar...    29   0.91 
SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces pomb...    27   2.1  
SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyc...    27   2.1  
SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A related|Schizosa...    27   2.1  
SPBC3B8.04c |||membrane transporter|Schizosaccharomyces pombe|ch...    27   2.8  
SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces pombe...    26   4.9  
SPAC17C9.07 |alg8||glucosyltransferase Alg8|Schizosaccharomyces ...    25   8.5  
SPCC965.14c |||cytosine deaminase |Schizosaccharomyces pombe|chr...    25   8.5  
SPCC1827.07c ||SPCP1E11.01c|SPX/EXS domain protein|Schizosacchar...    25   8.5  
SPCC1393.08 |||transcription factor, zf-GATA type |Schizosacchar...    25   8.5  
SPAC4H3.03c |||glucan 1,4-alpha-glucosidase |Schizosaccharomyces...    25   8.5  
SPBPB10D8.02c |||arylsulfatase |Schizosaccharomyces pombe|chr 2|...    25   8.5  

>SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 578

 Score =  105 bits (251), Expect = 9e-24
 Identities = 45/61 (73%), Positives = 55/61 (90%)
 Frame = +2

Query: 518 KTLAFLIPAIDLIYKLKFKPRNGTGVIILSPTRELSMQTFGVLMELMKYHHHTYGLVMGG 697
           KTLAFLIP I+++Y LKFKPRNGTGVII+SPTREL++Q FGV  EL+KYHH T+G+V+GG
Sbjct: 139 KTLAFLIPTIEMLYALKFKPRNGTGVIIISPTRELALQIFGVAKELLKYHHQTFGIVIGG 198

Query: 698 A 700
           A
Sbjct: 199 A 199



 Score = 60.5 bits (140), Expect = 2e-10
 Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
 Frame = +3

Query: 276 EQDTKEDDSEKKSNNDLPGSSLCLGILSD-QKFTALEGTVCEPTLLGIKDMGFITMTEIQ 452
           E +++E D+E +        +L     SD +KF+ L+  + E     IK+MGF TMTEIQ
Sbjct: 59  ESESEELDNENEDERVQKSVNLNASSTSDIEKFSDLQ--LSENIQKAIKEMGFETMTEIQ 116

Query: 453 AKAIPPLLEGRDLVGAAKTALEK 521
            ++IPPLL GRD++GAAKT   K
Sbjct: 117 KRSIPPLLAGRDVLGAAKTGSGK 139


>SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 735

 Score = 64.9 bits (151), Expect = 1e-11
 Identities = 26/60 (43%), Positives = 45/60 (75%)
 Frame = +2

Query: 518 KTLAFLIPAIDLIYKLKFKPRNGTGVIILSPTRELSMQTFGVLMELMKYHHHTYGLVMGG 697
           KTLAF++P I+ +Y+ K+   +G G +++SPTREL++QTF  L+++ + H  + GL++GG
Sbjct: 89  KTLAFIVPLIENLYRKKWTSLDGLGALVISPTRELAIQTFETLVKIGRLHSFSAGLIIGG 148



 Score = 48.8 bits (111), Expect = 8e-07
 Identities = 30/91 (32%), Positives = 51/91 (56%)
 Frame = +3

Query: 249 GRSSDDSQDEQDTKEDDSEKKSNNDLPGSSLCLGILSDQKFTALEGTVCEPTLLGIKDMG 428
           GRS +  + ++  +E++ E+ ++         +  LS+      E  + +PT   +K+  
Sbjct: 7   GRSREAREKKRKEEEEEIEELNSQ--------IEALSETVDHFAELPLTQPTKSALKNAH 58

Query: 429 FITMTEIQAKAIPPLLEGRDLVGAAKTALEK 521
           FIT+TEIQ + IP  L+GRD++GAAKT   K
Sbjct: 59  FITLTEIQKQCIPSALKGRDILGAAKTGSGK 89


>SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 754

 Score = 45.6 bits (103), Expect = 7e-06
 Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
 Frame = +3

Query: 255 SSDDSQDEQDTKEDDSE-KKSNNDLPGSSLCLGILSDQKFTALEGTVCEPTLLGIKDMGF 431
           +SD +    D++ED+ E  K N           +++    +     +  P L G+ ++GF
Sbjct: 220 NSDSAAGSSDSEEDEEEIAKKNAFFAEGDKEKSMMTTTHSSFQSMNLSRPILKGLSNLGF 279

Query: 432 ITMTEIQAKAIPPLLEGRDLVGAAKTALEK 521
              T+IQ K IP  L G+D+VGAA T   K
Sbjct: 280 EVPTQIQDKTIPLALLGKDIVGAAVTGSGK 309



 Score = 41.1 bits (92), Expect = 2e-04
 Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
 Frame = +2

Query: 518 KTLAFLIPAID-LIYKLKFKPRNGTGVIILSPTRELSMQTFGVLMELMKYHHHTYGLVMG 694
           KT AF++P ++ L+Y+ K  P   T V+IL PTREL+MQ   V  ++  +      L +G
Sbjct: 309 KTAAFIVPILERLLYRPKKVPT--TRVLILCPTRELAMQCHSVATKIASFTDIMVCLCIG 366

Query: 695 GATEVLKLR 721
           G +  LKL+
Sbjct: 367 GLS--LKLQ 373


>SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 606

 Score = 44.8 bits (101), Expect = 1e-05
 Identities = 21/49 (42%), Positives = 31/49 (63%)
 Frame = +2

Query: 518 KTLAFLIPAIDLIYKLKFKPRNGTGVIILSPTRELSMQTFGVLMELMKY 664
           KTLA+L+P  D + + +     G G +I++PTREL+ Q F V  EL+ Y
Sbjct: 51  KTLAYLLPCFDKVTR-RDTDETGLGALIVAPTRELATQIFNVTKELLAY 98



 Score = 30.7 bits (66), Expect = 0.23
 Identities = 16/32 (50%), Positives = 19/32 (59%)
 Frame = +3

Query: 426 GFITMTEIQAKAIPPLLEGRDLVGAAKTALEK 521
           GF  MT +QA AIP  L+ +DLV  A T   K
Sbjct: 20  GFKKMTPVQANAIPLFLKNKDLVVEAVTGSGK 51


>SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 848

 Score = 41.9 bits (94), Expect = 9e-05
 Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
 Frame = +3

Query: 252 RSSDDSQDEQDTKEDDSEKKSNNDLPGSSLCLGILSDQKFTALEGTVCEPTLL-GIKDMG 428
           +   ++  E  + EDD    ++  L  +    G   + K +  +      TLL  I   G
Sbjct: 29  KDKHENVGENVSDEDDGNYIASKLLESNRRTKGKKGNGKASNFQSMGLNQTLLRAIFKKG 88

Query: 429 FITMTEIQAKAIPPLLEGRDLVGAAKTALEK 521
           F   T IQ K IP LLEGRD+VG A+T   K
Sbjct: 89  FKAPTPIQRKTIPLLLEGRDVVGMARTGSGK 119



 Score = 34.7 bits (76), Expect = 0.014
 Identities = 21/62 (33%), Positives = 33/62 (53%)
 Frame = +2

Query: 518 KTLAFLIPAIDLIYKLKFKPRNGTGVIILSPTRELSMQTFGVLMELMKYHHHTYGLVMGG 697
           KT AF+IP I+ +        + T  +ILSP REL++QT  V+ +  K        ++GG
Sbjct: 119 KTAAFVIPMIEHLKSTL--ANSNTRALILSPNRELALQTVKVVKDFSKGTDLRSVAIVGG 176

Query: 698 AT 703
            +
Sbjct: 177 VS 178


>SPCC10H11.01 |prp11||ATP-dependent RNA helicase
           Prp11|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1014

 Score = 39.1 bits (87), Expect = 6e-04
 Identities = 18/40 (45%), Positives = 25/40 (62%)
 Frame = +3

Query: 402 TLLGIKDMGFITMTEIQAKAIPPLLEGRDLVGAAKTALEK 521
           T+  I  +G+   T IQA+AIP +  GRD++G AKT   K
Sbjct: 429 TISVINSLGYEKPTSIQAQAIPAITSGRDVIGVAKTGSGK 468



 Score = 33.5 bits (73), Expect = 0.032
 Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
 Frame = +2

Query: 518 KTLAFLIPAIDLIYKLK-FKPRNGTGVIILSPTRELSMQTFGVLMELMKYHHHTYGLVMG 694
           KT+AFL+P    I   +  K   G   II++PTREL++Q F      +K  +       G
Sbjct: 468 KTIAFLLPMFRHIKDQRPLKTGEGPIAIIMTPTRELAVQIFRECKPFLKLLNIRACCAYG 527

Query: 695 GA 700
           GA
Sbjct: 528 GA 529


>SPBC776.09 |ste13||ATP-dependent RNA helicase
           Ste13|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 485

 Score = 37.5 bits (83), Expect = 0.002
 Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
 Frame = +2

Query: 518 KTLAFLIPAIDLIYKLKFKPRNGTGVIILSPTRELSMQTFGVLMELMKYHHHTYGLVMGG 697
           KT AF+IP+++ +   K K +     +IL PTREL++QT  V   L K+ +    +  GG
Sbjct: 94  KTAAFVIPSLEKVDTKKSKIQT----LILVPTRELALQTSQVCKTLGKHMNVKVMVTTGG 149

Query: 698 AT---EVLKLRNSLKV 736
            T   ++++L +++ +
Sbjct: 150 TTLRDDIIRLNDTVHI 165



 Score = 32.7 bits (71), Expect = 0.056
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +3

Query: 405 LLGIKDMGFITMTEIQAKAIPPLLEGRDLVGAAKTALEK 521
           L+GI + GF   + IQ ++IP  L GRD++  AK    K
Sbjct: 56  LMGIFEAGFERPSPIQEESIPIALSGRDILARAKNGTGK 94


>SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 578

 Score = 37.5 bits (83), Expect = 0.002
 Identities = 23/61 (37%), Positives = 38/61 (62%)
 Frame = +2

Query: 518 KTLAFLIPAIDLIYKLKFKPRNGTGVIILSPTRELSMQTFGVLMELMKYHHHTYGLVMGG 697
           KT+AF IPA+  +  L    ++   V+++SPTREL++QT+  L  L++  +    +V GG
Sbjct: 215 KTVAFGIPALQYLNGLSDN-KSVPRVLVVSPTRELAIQTYENLNSLIQGTNLKAVVVYGG 273

Query: 698 A 700
           A
Sbjct: 274 A 274



 Score = 29.1 bits (62), Expect = 0.69
 Identities = 15/27 (55%), Positives = 17/27 (62%)
 Frame = +3

Query: 441 TEIQAKAIPPLLEGRDLVGAAKTALEK 521
           T IQA   P LL GRD+VG A+T   K
Sbjct: 189 TPIQAATWPYLLAGRDVVGIAETGSGK 215


>SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 465

 Score = 36.3 bits (80), Expect = 0.005
 Identities = 24/85 (28%), Positives = 43/85 (50%)
 Frame = +3

Query: 267 SQDEQDTKEDDSEKKSNNDLPGSSLCLGILSDQKFTALEGTVCEPTLLGIKDMGFITMTE 446
           +   + + E+++    NN+ P +   LG++ +         +CE      + +GF T T 
Sbjct: 25  NSSSEKSSENNNGDSQNNEAPKTFKELGVIDE---------LCE----ACEKLGFKTPTP 71

Query: 447 IQAKAIPPLLEGRDLVGAAKTALEK 521
           IQ +AIP +L  RD++G A+T   K
Sbjct: 72  IQQEAIPVVLNKRDVIGLAQTGSGK 96


>SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 535

 Score = 35.5 bits (78), Expect = 0.008
 Identities = 23/43 (53%), Positives = 30/43 (69%), Gaps = 3/43 (6%)
 Frame = +2

Query: 518 KTLAFLIPAIDLIYKLKFKPR-NGTGV--IILSPTRELSMQTF 637
           KTLAFL+ A   +  LK KPR N + +  +ILSPTREL++Q F
Sbjct: 89  KTLAFLLVAFKDV--LKGKPRLNSSKIHSVILSPTRELALQIF 129


>SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 709

 Score = 32.7 bits (71), Expect = 0.056
 Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
 Frame = +2

Query: 518 KTLAFLIPAIDLIYKLK---FKPRNGTGVIILSPTRELSMQTFGVLMEL 655
           KTLA+L+P +  + +L        +G   +I++PTREL  Q + V  +L
Sbjct: 191 KTLAYLLPIVQRLIRLPKNLHTRTSGIYAVIMAPTRELCQQIYNVANKL 239


>SPBP8B7.16c |dbp2||ATP-dependent RNA helicase
           Dbp2|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 550

 Score = 32.7 bits (71), Expect = 0.056
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = +3

Query: 414 IKDMGFITMTEIQAKAIPPLLEGRDLVGAAKTALEK 521
           +K +GF   T IQ +A P  + GRD+VG + T   K
Sbjct: 137 VKQLGFEAPTPIQQQAWPMAMSGRDMVGISATGSGK 172



 Score = 31.9 bits (69), Expect = 0.098
 Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
 Frame = +2

Query: 518 KTLAFLIPAIDLIYKLKF-KPRNGTGVIILSPTRELSMQ 631
           KTL++ +PAI  I       P +G  V++L+PTREL++Q
Sbjct: 172 KTLSYCLPAIVHINAQPLLSPGDGPIVLVLAPTRELAVQ 210


>SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 481

 Score = 30.3 bits (65), Expect = 0.30
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = +2

Query: 518 KTLAFLIPAIDLIYKLKFKPRNGTGVIILSPTRELSMQTF 637
           KT+A+L P   ++ KL+     G   II++PTREL  Q +
Sbjct: 96  KTIAYLFP---ILQKLQLHVPGGYRAIIVAPTRELCEQIY 132



 Score = 26.6 bits (56), Expect = 3.7
 Identities = 17/47 (36%), Positives = 21/47 (44%)
 Frame = +3

Query: 381 EGTVCEPTLLGIKDMGFITMTEIQAKAIPPLLEGRDLVGAAKTALEK 521
           EG +CE     +K       T IQ  AIP +   RDL+  A T   K
Sbjct: 54  EGILCE----NLKKQNITECTTIQRYAIPTIGSKRDLLACAPTGSGK 96


>SPCC1494.06c |||ATP-dependent RNA helicase Dbp9
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 595

 Score = 29.9 bits (64), Expect = 0.40
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +3

Query: 441 TEIQAKAIPPLLEGRDLVGAAKTALEK 521
           T +Q++ IP  LEG+DLV  A+T   K
Sbjct: 38  TSVQSETIPLALEGKDLVAQARTGSGK 64


>SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 453

 Score = 29.9 bits (64), Expect = 0.40
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +3

Query: 414 IKDMGFITMTEIQAKAIPPLLEGRDLVGAAKTALEK 521
           +K +     T+IQ   I  +LEGR+ +G AKT   K
Sbjct: 22  LKALAIYEPTDIQEGVIAQILEGRNCIGGAKTGSGK 57



 Score = 29.5 bits (63), Expect = 0.52
 Identities = 21/60 (35%), Positives = 32/60 (53%)
 Frame = +2

Query: 518 KTLAFLIPAIDLIYKLKFKPRNGTGVIILSPTRELSMQTFGVLMELMKYHHHTYGLVMGG 697
           KT AF +P I+   K    P +G   +IL+PTREL++Q       L    +  + L++GG
Sbjct: 57  KTAAFALPIIE---KWSKDP-SGIFALILTPTRELAIQIDEQFAALGANLNLKHALIVGG 112


>SPCC63.11 |prp28||U5 snRNP-associated protein Prp28
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 662

 Score = 29.9 bits (64), Expect = 0.40
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +3

Query: 414 IKDMGFITMTEIQAKAIPPLLEGRDLVGAAKTALEK 521
           +K + +   + IQ  AIP LL+ +DL+G A+T   K
Sbjct: 264 LKKVNYKEPSSIQRAAIPVLLQRKDLIGIAETGSGK 299



 Score = 29.9 bits (64), Expect = 0.40
 Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
 Frame = +2

Query: 518 KTLAFLIPAIDLIYKL----KFKPRNGTGVIILSPTRELSMQ 631
           KT AF+IP I  I KL    +     G   ++L+PTREL+ Q
Sbjct: 299 KTAAFIIPLIIAISKLPPLTESNMHLGPYAVVLAPTRELAQQ 340


>SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase
           Sum3|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 636

 Score = 29.9 bits (64), Expect = 0.40
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +3

Query: 405 LLGIKDMGFITMTEIQAKAIPPLLEGRDLVGAAKTALEK 521
           L  IK  G+   T +Q  +IP +  GRDL+  A+T   K
Sbjct: 181 LQNIKLSGYTQPTPVQKNSIPIVTSGRDLMACAQTGSGK 219


>SPAC1006.07 |||translation initiation factor
           eIF4A|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 392

 Score = 28.7 bits (61), Expect = 0.91
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +3

Query: 360 DQKFTALEGTVCEPTLL-GIKDMGFITMTEIQAKAIPPLLEGRDLVGAAKTALEK 521
           D+     +    +P LL GI   GF   + IQ +AI P+L  RD++  A++   K
Sbjct: 15  DEVIDTFDDMNLKPELLRGIYAYGFERPSAIQQRAIMPILGERDVLAQAQSGTGK 69


>SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 394

 Score = 27.5 bits (58), Expect = 2.1
 Identities = 11/28 (39%), Positives = 20/28 (71%)
 Frame = +3

Query: 258 SDDSQDEQDTKEDDSEKKSNNDLPGSSL 341
           SDD +DE+ + +++ E+ S+ +L  SSL
Sbjct: 231 SDDEEDEEGSADEEDEEDSDVELSESSL 258


>SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 503

 Score = 27.5 bits (58), Expect = 2.1
 Identities = 17/49 (34%), Positives = 26/49 (53%)
 Frame = +2

Query: 518 KTLAFLIPAIDLIYKLKFKPRNGTGVIILSPTRELSMQTFGVLMELMKY 664
           KT AF +  +  +     KP+     I L+P+REL+ Q   V+ E+ KY
Sbjct: 166 KTAAFALTMLSRVDASVPKPQ----AICLAPSRELARQIMDVVTEMGKY 210


>SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A
           related|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 394

 Score = 27.5 bits (58), Expect = 2.1
 Identities = 16/54 (29%), Positives = 30/54 (55%)
 Frame = +2

Query: 542 AIDLIYKLKFKPRNGTGVIILSPTRELSMQTFGVLMELMKYHHHTYGLVMGGAT 703
           +I ++  +    R+ T  +ILSPTREL++Q   V++ L  + +      +GG +
Sbjct: 76  SIGILQSIDLSVRD-TQALILSPTRELAVQIQNVVLALGDHMNVQCHACIGGTS 128


>SPBC3B8.04c |||membrane transporter|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 867

 Score = 27.1 bits (57), Expect = 2.8
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 261 DDSQDEQDTKEDDSEKKSNND 323
           DD  D++D  ED+ E  +NN+
Sbjct: 207 DDDDDDEDEDEDEDEDNNNNN 227


>SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 516

 Score = 26.2 bits (55), Expect = 4.9
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +3

Query: 288 KEDDSEKKSNNDLPGSSLCLGILSDQKFTALEGTVCEPT 404
           ++DD E++    LP  SL L   ++   + +E  V EPT
Sbjct: 130 EQDDLEREEMQILPTDSLLLAARTEDNLSHVEVYVYEPT 168


>SPAC17C9.07 |alg8||glucosyltransferase Alg8|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 501

 Score = 25.4 bits (53), Expect = 8.5
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = -2

Query: 491 KIPAFQQRRYSFSLNLCHRYKAHIFNS*KSWFAHCAF 381
           +IP    R + FS  LCH Y A  F +  S+    AF
Sbjct: 243 QIPQLLSRLFPFSRGLCHAYWAPNFWALYSFVDRVAF 279


>SPCC965.14c |||cytosine deaminase |Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 162

 Score = 25.4 bits (53), Expect = 8.5
 Identities = 10/38 (26%), Positives = 20/38 (52%)
 Frame = +3

Query: 405 LLGIKDMGFITMTEIQAKAIPPLLEGRDLVGAAKTALE 518
           + G+ +   I +T+   +  P  +  RD++GAA   +E
Sbjct: 103 IFGLSNENLIKLTQKSGECPPLYINSRDILGAASHPIE 140


>SPCC1827.07c ||SPCP1E11.01c|SPX/EXS domain
           protein|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 682

 Score = 25.4 bits (53), Expect = 8.5
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = +1

Query: 454 LKLYLLCWKAGILWVLPKRLWKNTSILNTGYRPYI 558
           + L   C    + + L KRLW+   + N+ + P +
Sbjct: 434 VSLTYACGNISLFFCLYKRLWRQPQLCNSSHSPLL 468


>SPCC1393.08 |||transcription factor, zf-GATA type
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 557

 Score = 25.4 bits (53), Expect = 8.5
 Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
 Frame = -1

Query: 666 WYFINSMRTPNV--CID--NSLVGDKMMTPVPFLGLNFNLYIRSIAGIKNASVFPEPFWQ 499
           W  ++SM   N   C D  ++ +GD  +     L  N ++ I +++  K +   P P + 
Sbjct: 107 WSLLDSMDFDNQRQCSDLESAQLGDSGLLKSTILS-NSHIDIAALSSSKTSE--PTPPFS 163

Query: 498 HPQDPCLPT 472
           + Q PC+PT
Sbjct: 164 YVQTPCIPT 172


>SPAC4H3.03c |||glucan 1,4-alpha-glucosidase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 649

 Score = 25.4 bits (53), Expect = 8.5
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = -3

Query: 511 AVLAAPTRSLPSNKGGI 461
           AV+A+PT SLP + GG+
Sbjct: 278 AVIASPTFSLPEDLGGV 294


>SPBPB10D8.02c |||arylsulfatase |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 554

 Score = 25.4 bits (53), Expect = 8.5
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 673 YIWSGNGWCNRSTEAQKLSKG 735
           +IW G  W   +T   +LSKG
Sbjct: 363 FIWYGPRWAQAATAPSRLSKG 383


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,517,293
Number of Sequences: 5004
Number of extensions: 47886
Number of successful extensions: 210
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 206
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 349251756
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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