Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0621
         (738 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    31   0.028
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   2.4  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    25   2.4  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    25   2.4  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    25   2.4  
AY176051-1|AAO19582.1|  522|Anopheles gambiae cytochrome P450 CY...    25   3.2  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    24   5.6  
AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.         23   7.4  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   9.8  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 31.5 bits (68), Expect = 0.028
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +3

Query: 396 EPTLLGIKDMGFITMTEIQAKAIPPLLEGRDLVGAAKTALEK 521
           E  +  ++   +   T IQ  AIP +L GRDL+  A+T   K
Sbjct: 183 EEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLMACAQTGSGK 224



 Score = 28.7 bits (61), Expect = 0.20
 Identities = 18/42 (42%), Positives = 29/42 (69%), Gaps = 4/42 (9%)
 Frame = +2

Query: 518 KTLAFLIPAID-LIYK---LKFKPRNGTGVIILSPTRELSMQ 631
           KT AF++P I  L+ K   L+ + RN   ++I++PTREL++Q
Sbjct: 224 KTAAFMLPMIHHLLDKEDSLELRTRNPY-IVIVAPTRELAIQ 264


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +3

Query: 237 SKI*GRSSDDSQDEQDTKEDDSEKKSNNDLPGSS 338
           SK+      DS+DE+D+  + S   SNN+   SS
Sbjct: 175 SKLRSERIRDSRDERDSLPNASSNNSNNNNNSSS 208


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +3

Query: 237 SKI*GRSSDDSQDEQDTKEDDSEKKSNNDLPGSS 338
           SK+      DS+DE+D+  + S   SNN+   SS
Sbjct: 175 SKLRSERIRDSRDERDSLPNASSNNSNNNNNSSS 208


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +3

Query: 237 SKI*GRSSDDSQDEQDTKEDDSEKKSNNDLPGSS 338
           SK+      DS+DE+D+  + S   SNN+   SS
Sbjct: 127 SKLRSERIRDSRDERDSLPNASSNNSNNNNNSSS 160


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/proton
            exchanger 3 protein.
          Length = 1221

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +3

Query: 249  GRSSDDSQDEQDTKEDDSEKKSNND 323
            G  ++D +DE D ++DD E +   D
Sbjct: 1192 GAGNNDDEDEDDDEDDDDEDEDCAD 1216


>AY176051-1|AAO19582.1|  522|Anopheles gambiae cytochrome P450
           CYP12F1 protein.
          Length = 522

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +2

Query: 518 KTLAFLIPAI-DLIYKLKFKPRNGTGVIILSPTRELSMQTFGVLMELM 658
           K +  L+  I DL+Y+L+F+P         +P+ +L MQ    L  L+
Sbjct: 232 KAIISLVQKIFDLMYRLEFEPEYVLWKYFQTPSLKLLMQELDNLTNLV 279


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +3

Query: 237 SKI*GRSSDDSQDEQDTKEDDSEKKSNND 323
           SK+      DS+DE+D+  + S   SNN+
Sbjct: 175 SKLRSERIRDSRDERDSLPNASSNNSNNN 203


>AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.
          Length = 144

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 701 LHHPLPDHMYGGGISS 654
           +H P P HM  GG+ S
Sbjct: 10  VHGPYPPHMVPGGVDS 25


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 249  GRSSDDSQDEQDTKEDD 299
            G   DD  DE D  +DD
Sbjct: 1823 GNEDDDEDDEDDDDDDD 1839


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 621,379
Number of Sequences: 2352
Number of extensions: 11249
Number of successful extensions: 28
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75676146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)