Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0621
(738 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 93 2e-19
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 62 3e-10
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 48 9e-06
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 48 9e-06
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 45 5e-05
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 45 5e-05
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 42 5e-04
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 37 0.013
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 37 0.017
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 36 0.040
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 34 0.12
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 34 0.12
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 32 0.37
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 32 0.49
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 32 0.49
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 31 0.64
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 31 0.64
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 31 0.85
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 31 0.85
U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical p... 31 1.1
Z22176-2|CAD91716.2| 650|Caenorhabditis elegans Hypothetical pr... 30 1.5
U97014-1|AAB52425.1| 893|Caenorhabditis elegans Hypothetical pr... 30 1.5
AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical... 30 1.5
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 29 2.6
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 29 2.6
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 29 2.6
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 29 3.4
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 29 3.4
AF025458-2|AAB70978.1| 557|Caenorhabditis elegans Hypothetical ... 29 4.5
U70870-1|AAB51198.1| 1404|Caenorhabditis elegans CELF35-1 protein. 28 6.0
U40934-5|AAA81683.2| 1404|Caenorhabditis elegans Hypothetical pr... 28 6.0
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 28 7.9
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 28 7.9
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 28 7.9
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 92.7 bits (220), Expect = 2e-19
Identities = 43/61 (70%), Positives = 54/61 (88%)
Frame = +2
Query: 518 KTLAFLIPAIDLIYKLKFKPRNGTGVIILSPTRELSMQTFGVLMELMKYHHHTYGLVMGG 697
KTLAFL+PAI+L++KL +K NGTGVII+SPTRELSMQT+GVL EL++ + TYGLVMGG
Sbjct: 118 KTLAFLLPAIELLHKLNWKQHNGTGVIIVSPTRELSMQTYGVLSELLEGSNLTYGLVMGG 177
Query: 698 A 700
+
Sbjct: 178 S 178
Score = 66.9 bits (156), Expect = 1e-11
Identities = 33/87 (37%), Positives = 52/87 (59%)
Frame = +3
Query: 261 DDSQDEQDTKEDDSEKKSNNDLPGSSLCLGILSDQKFTALEGTVCEPTLLGIKDMGFITM 440
++ +E+D +E + E+K + + L+ F +LEG V L ++ +GF TM
Sbjct: 32 EEPMEEEDEEEVEEEQKHQTEESSETKVSEFLTKTTFASLEGKVNANLLKAVQGLGFTTM 91
Query: 441 TEIQAKAIPPLLEGRDLVGAAKTALEK 521
TEIQAK+I PLLEG+D++ +AKT K
Sbjct: 92 TEIQAKSIDPLLEGKDVLASAKTGSGK 118
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 62.5 bits (145), Expect = 3e-10
Identities = 26/61 (42%), Positives = 43/61 (70%)
Frame = +2
Query: 518 KTLAFLIPAIDLIYKLKFKPRNGTGVIILSPTRELSMQTFGVLMELMKYHHHTYGLVMGG 697
KTLA +IP ++ +++ K+ P G G +I+SPTREL++QTF + + +H + GLV+GG
Sbjct: 126 KTLALVIPVLEALWRAKWSPDYGLGALIISPTRELALQTFSTINAVGAHHGFSCGLVIGG 185
Query: 698 A 700
+
Sbjct: 186 S 186
Score = 36.3 bits (80), Expect = 0.023
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = +3
Query: 402 TLLGIKDMGFITMTEIQAKAIPPLLEGRDLVGAAKTALEK 521
TL G+KD + TEIQ I L G D+VGAAKT K
Sbjct: 87 TLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGK 126
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 47.6 bits (108), Expect = 9e-06
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Frame = +3
Query: 255 SSDDSQDEQDTKEDDSEKKSNNDLPGS-SLCLGILSDQKFTALEGTVCEPTLLGIKDMGF 431
+SD+ ++E + +E D E KS++D P + ++ +KF+ L VC ++ M
Sbjct: 53 ASDEDEEESEGEEGD-EFKSSDDTPKPIQISEDNMTTKKFSQLG--VCSWITQQLQTMQI 109
Query: 432 ITMTEIQAKAIPPLLEGRDLVGAAKTALEK 521
T T +QA IP +LEG D++G A+T K
Sbjct: 110 KTATPVQAACIPKILEGSDILGCARTGTGK 139
Score = 32.3 bits (70), Expect = 0.37
Identities = 24/68 (35%), Positives = 35/68 (51%)
Frame = +2
Query: 518 KTLAFLIPAIDLIYKLKFKPRNGTGVIILSPTRELSMQTFGVLMELMKYHHHTYGLVMGG 697
KTLAF IP ++ KL P G +IL+PTREL+ Q L K +++GG
Sbjct: 139 KTLAFAIP---ILQKLSVDPY-GIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGG 194
Query: 698 ATEVLKLR 721
+ + + R
Sbjct: 195 RSLIHQAR 202
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 47.6 bits (108), Expect = 9e-06
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Frame = +3
Query: 255 SSDDSQDEQDTKEDDSEKKSNNDLPGS-SLCLGILSDQKFTALEGTVCEPTLLGIKDMGF 431
+SD+ ++E + +E D E KS++D P + ++ +KF+ L VC ++ M
Sbjct: 53 ASDEDEEESEGEEGD-EFKSSDDTPKPIQISEDNMTTKKFSQLG--VCSWITQQLQTMQI 109
Query: 432 ITMTEIQAKAIPPLLEGRDLVGAAKTALEK 521
T T +QA IP +LEG D++G A+T K
Sbjct: 110 KTATPVQAACIPKILEGSDILGCARTGTGK 139
Score = 32.3 bits (70), Expect = 0.37
Identities = 24/68 (35%), Positives = 35/68 (51%)
Frame = +2
Query: 518 KTLAFLIPAIDLIYKLKFKPRNGTGVIILSPTRELSMQTFGVLMELMKYHHHTYGLVMGG 697
KTLAF IP ++ KL P G +IL+PTREL+ Q L K +++GG
Sbjct: 139 KTLAFAIP---ILQKLSVDPY-GIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGG 194
Query: 698 ATEVLKLR 721
+ + + R
Sbjct: 195 RSLIHQAR 202
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 45.2 bits (102), Expect = 5e-05
Identities = 24/60 (40%), Positives = 38/60 (63%)
Frame = +2
Query: 518 KTLAFLIPAIDLIYKLKFKPRNGTGVIILSPTRELSMQTFGVLMELMKYHHHTYGLVMGG 697
KT AF+IP ++ KLK + G +++SPTREL++QTF V+ EL ++ ++GG
Sbjct: 74 KTAAFVIP---MLQKLKRRDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGG 130
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 45.2 bits (102), Expect = 5e-05
Identities = 24/60 (40%), Positives = 38/60 (63%)
Frame = +2
Query: 518 KTLAFLIPAIDLIYKLKFKPRNGTGVIILSPTRELSMQTFGVLMELMKYHHHTYGLVMGG 697
KT AF+IP ++ KLK + G +++SPTREL++QTF V+ EL ++ ++GG
Sbjct: 74 KTAAFVIP---MLQKLKRRDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGG 130
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 41.9 bits (94), Expect = 5e-04
Identities = 23/60 (38%), Positives = 34/60 (56%)
Frame = +2
Query: 518 KTLAFLIPAIDLIYKLKFKPRNGTGVIILSPTRELSMQTFGVLMELMKYHHHTYGLVMGG 697
KTLAF++P + +I K +P + G +ILSP+REL Q V+ + + T V GG
Sbjct: 59 KTLAFVLPMMRMIQNAKLQPAD-IGALILSPSRELCSQIVSVIQPFAEKLNLTVETVTGG 117
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 38.3 bits (85), Expect = 0.006
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Frame = +2
Query: 518 KTLAFLIPAIDLIYKLKFKPR-NGTGVIILSPTRELSMQTFGVLMELMKYHHHTYGLVM- 691
KTLAF++PA+ I K + R G V++L PTREL+ Q V ++ H+ GL M
Sbjct: 179 KTLAFMLPALVHITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSIDFC----HSLGLKMT 234
Query: 692 ---GGATE 706
GGA++
Sbjct: 235 CLFGGASK 242
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 37.1 bits (82), Expect = 0.013
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 6/59 (10%)
Frame = +2
Query: 518 KTLAFLIPAIDLIYKLK----FKPRNGTGV--IILSPTRELSMQTFGVLMELMKYHHHT 676
KTLAF +P ID I +LK + N + + ++L PTREL+ QT+ E +KY +T
Sbjct: 176 KTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQTY---TEFLKYCANT 231
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 36.7 bits (81), Expect = 0.017
Identities = 18/41 (43%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Frame = +2
Query: 518 KTLAFLIPAI-DLIYKLKFKPRNGTGVIILSPTRELSMQTF 637
KTLAFL+P ++ + + + +G +IL+PTREL+MQT+
Sbjct: 354 KTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTY 394
Score = 36.3 bits (80), Expect = 0.023
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +3
Query: 414 IKDMGFITMTEIQAKAIPPLLEGRDLVGAAKTALEK 521
+K + T IQA+AIP ++ GRD++G AKT K
Sbjct: 319 LKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGK 354
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 35.5 bits (78), Expect = 0.040
Identities = 15/36 (41%), Positives = 25/36 (69%)
Frame = +3
Query: 414 IKDMGFITMTEIQAKAIPPLLEGRDLVGAAKTALEK 521
+K++G++ T IQ +AIP L+ RD++G A+T K
Sbjct: 316 VKEIGYLEPTPIQRQAIPIGLQNRDVIGVAETGSGK 351
Score = 28.3 bits (60), Expect = 6.0
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Frame = +2
Query: 518 KTLAFLIPAIDLIYKLKFKPRN-----GTGVIILSPTRELSMQTFGVLMELMKYHHHTYG 682
KT AFL+P + I L R G II++PTREL+ Q + K
Sbjct: 351 KTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFGKLLGIKTV 410
Query: 683 LVMGGAT---EVLKLRNSLKV 736
V+GGA+ + +KLR ++V
Sbjct: 411 SVIGGASREDQGMKLRMGVEV 431
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 33.9 bits (74), Expect = 0.12
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Frame = +2
Query: 518 KTLAFLIPAIDLIYKLKFKPRNGTG------VIILSPTRELSMQTFGVLMELMKYHHHTY 679
KTLAFLIP + + + K R+ T ++I++PTREL QTF +L
Sbjct: 786 KTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQLTYETGLKC 845
Query: 680 GLVMGG 697
GL GG
Sbjct: 846 GLAFGG 851
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 33.9 bits (74), Expect = 0.12
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Frame = +2
Query: 518 KTLAFLIPAIDLIYKLKFKPRNGTG------VIILSPTRELSMQTFGVLMELMKYHHHTY 679
KTLAFLIP + + + K R+ T ++I++PTREL QTF +L
Sbjct: 786 KTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQLTYETGLKC 845
Query: 680 GLVMGG 697
GL GG
Sbjct: 846 GLAFGG 851
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 33.1 bits (72), Expect = 0.21
Identities = 16/27 (59%), Positives = 18/27 (66%)
Frame = +3
Query: 441 TEIQAKAIPPLLEGRDLVGAAKTALEK 521
T IQA AIP L GRD++G AKT K
Sbjct: 289 TPIQAMAIPSALSGRDVLGIAKTGSGK 315
Score = 31.9 bits (69), Expect = 0.49
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 518 KTLAFLIPAI-DLIYKLKFKPRNGTGVIILSPTRELSMQTFGVLMELMKYHHHTYGLVMG 694
KT A+L PAI ++ + K G +I+ PTREL++Q F + K ++ G
Sbjct: 315 KTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQVFQEAKKFCKVYNINPICAYG 374
Query: 695 GATE 706
G ++
Sbjct: 375 GGSK 378
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 32.3 bits (70), Expect = 0.37
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = +3
Query: 390 VCEPTLLGIKDMGFITMTEIQAKAIPPLLEGRDLVGAAKTALEK 521
V +P + +G++ ++IQ A+P L+G+D++G A+T K
Sbjct: 51 VSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGK 94
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 31.9 bits (69), Expect = 0.49
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 7/61 (11%)
Frame = +2
Query: 518 KTLAFLIPAIDLI-------YKLKFKPRNGTGVIILSPTRELSMQTFGVLMELMKYHHHT 676
KTLAFL+PA+ I K + + V++LSPTREL+ Q G E+ KY ++
Sbjct: 134 KTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEG---EVKKYSYNG 190
Query: 677 Y 679
Y
Sbjct: 191 Y 191
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 31.9 bits (69), Expect = 0.49
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +3
Query: 396 EPTLLGIKDMGFITMTEIQAKAIPPLLEGRDLVGAAKTALEK 521
E L GI GF + IQ +AIP +L+ RD++ A++ K
Sbjct: 35 EDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGK 76
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = +2
Query: 542 AIDLIYKLKFKPRNGTGVIILSPTRELSMQTFGVLMELMKYHHHTYGLVMGG 697
+I ++ L + R T +ILSPTREL++Q V++ L Y + +GG
Sbjct: 81 SISVLQSLDTQVRE-TQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGG 131
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 31.5 bits (68), Expect = 0.64
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +3
Query: 396 EPTLLGIKDMGFITMTEIQAKAIPPLLEGRDLVGAAKTALEK 521
E L GI GF + IQ +A+P +L+ RD++ A++ K
Sbjct: 35 EDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGK 76
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = +2
Query: 542 AIDLIYKLKFKPRNGTGVIILSPTRELSMQTFGVLMELMKYHHHTYGLVMGG 697
+I ++ L + R T +ILSPTREL++Q V++ L Y + +GG
Sbjct: 81 SISVLQSLDTQVRE-TQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGG 131
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 31.5 bits (68), Expect = 0.64
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +2
Query: 518 KTLAFLIPAIDLIYKLKFKPR-NGTGVIILSPTRELSMQTFGVLMELMKYHHHTYGLVMG 694
KT A+ IP I+ K +P +++ PTREL++QT + +EL K H +V
Sbjct: 93 KTGAYCIPVIE-----KIQPALKAIQAMVIVPTRELALQTSQICVELSK-HIQLKVMVTT 146
Query: 695 GATEV 709
G T++
Sbjct: 147 GGTDL 151
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 31.1 bits (67), Expect = 0.85
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 6/44 (13%)
Frame = +2
Query: 518 KTLAFLIPAIDLIYKLKFKPRN------GTGVIILSPTRELSMQ 631
KT AF +P ID I ++ + RN G +IL+PTREL+ Q
Sbjct: 431 KTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQ 474
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 31.1 bits (67), Expect = 0.85
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 405 LLGIKDMGFITMTEIQAKAIPPLLEGR-DLVGAAKTALEK 521
L I+ MGF TEIQ+ +P + R D++GAA+T K
Sbjct: 167 LEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGK 206
>U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical
protein C33G8.2 protein.
Length = 390
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = +3
Query: 132 KRS*EESCTRR*HKWKSSQKKIEKGXXXXXXXTS*SKI*GRSSDDSQDEQDTKEDDSEKK 311
K+ EE ++ + K +KK +K K +D DE+D K+D +KK
Sbjct: 128 KKKQEEEDKKKEEEEKDKKKKDKKKEEDDEEEEQKDKKKKDEKNDDDDEEDKKKDKKKKK 187
Query: 312 SNND 323
+ND
Sbjct: 188 DDND 191
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 252 RSSDDSQDEQDTKEDDSEKKSNND 323
+ DD +DE D K+D +KK + D
Sbjct: 206 KDDDDDEDENDKKKDKKKKKDDKD 229
>Z22176-2|CAD91716.2| 650|Caenorhabditis elegans Hypothetical
protein ZK1098.2 protein.
Length = 650
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -1
Query: 594 TPVPFLGLNFNLYIRSIAGIKNASVFPEPFWQHPQD 487
+P+P + FN Y++ + K+A++ P FW Q+
Sbjct: 556 SPIPTVSQEFNDYVQLVVSSKDATLAPLEFWAKYQE 591
>U97014-1|AAB52425.1| 893|Caenorhabditis elegans Hypothetical
protein T05E8.1 protein.
Length = 893
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +3
Query: 255 SSDDSQDEQDTKEDDSEKKSNN 320
SSDDS E+D EDDS+ +S N
Sbjct: 20 SSDDSGPERDRDEDDSDNESRN 41
>AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical
protein K07H8.10 protein.
Length = 798
Score = 30.3 bits (65), Expect = 1.5
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = +3
Query: 261 DDSQDEQDTKEDDSEKKSNNDLP 329
+D +DE+D +E+D E++ D+P
Sbjct: 483 EDEEDEEDVEEEDEEEEEEEDIP 505
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 396 EPTLLGIKDMGFITMTEIQAKAIPPLLEGRDLVGAAKTALEK 521
E L GI GF + IQ +AI P G+D++ A++ K
Sbjct: 38 EELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGK 79
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 396 EPTLLGIKDMGFITMTEIQAKAIPPLLEGRDLVGAAKTALEK 521
E L GI GF + IQ +AI P G+D++ A++ K
Sbjct: 38 EELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGK 79
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 414 IKDMGFITMTEIQAKAIPPLLEGRDLVGAAKTALEK 521
IK G+ T +Q +IP L GRDL+ A+T K
Sbjct: 181 IKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTGSGK 216
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +3
Query: 396 EPTLLGIKDMGFITMTEIQAKAIPPLLEGRDLVGAAKTALEK 521
+ TL +K+ F + +QA+AIP L GRD++ AK+ K
Sbjct: 31 QKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGK 72
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +3
Query: 396 EPTLLGIKDMGFITMTEIQAKAIPPLLEGRDLVGAAKTALEK 521
+ TL +K+ F + +QA+AIP L GRD++ AK+ K
Sbjct: 31 QKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGK 72
>AF025458-2|AAB70978.1| 557|Caenorhabditis elegans Hypothetical
protein C01B12.5 protein.
Length = 557
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 328 LDQASA*VYYQIKNSLHWKAQCANQLF*ELKIWAL 432
LD A++ ++ QIK L WK ++ EL IW L
Sbjct: 7 LDVATSGLFTQIKVLLRWKGSVWKSIWSELLIWLL 41
>U70870-1|AAB51198.1| 1404|Caenorhabditis elegans CELF35-1 protein.
Length = 1404
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -1
Query: 732 FREFLSFSTSVAPPITRPYVWWWYFINSMRTPNVCIDNSLVGDKMMT 592
FRE+L +T P+T P +W+W +I S + + ++ KM T
Sbjct: 800 FREWLETTT----PLTLPELWYWSYIESRYGCALSQKSKVIYGKMCT 842
>U40934-5|AAA81683.2| 1404|Caenorhabditis elegans Hypothetical
protein F35H10.10 protein.
Length = 1404
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -1
Query: 732 FREFLSFSTSVAPPITRPYVWWWYFINSMRTPNVCIDNSLVGDKMMT 592
FRE+L +T P+T P +W+W +I S + + ++ KM T
Sbjct: 800 FREWLETTT----PLTLPELWYWSYIESRYGCALSQKSKVIYGKMCT 842
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 426 GFITMTEIQAKAIPPLLEGRDLVGAAKTALEK 521
G+ T +Q +IP LL RDL+ A+T K
Sbjct: 158 GYSKPTPVQKHSIPTLLANRDLMSCAQTGSGK 189
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 426 GFITMTEIQAKAIPPLLEGRDLVGAAKTALEK 521
G+ T +Q +IP LL RDL+ A+T K
Sbjct: 142 GYSKPTPVQKHSIPTLLANRDLMSCAQTGSGK 173
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 426 GFITMTEIQAKAIPPLLEGRDLVGAAKTALEK 521
G+ T +Q +IP LL RDL+ A+T K
Sbjct: 139 GYSKPTPVQKHSIPTLLANRDLMSCAQTGSGK 170
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,814,223
Number of Sequences: 27780
Number of extensions: 265001
Number of successful extensions: 1220
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1004
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1196
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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