BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0620 (769 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 23 3.6 DQ494421-1|ABF55372.1| 73|Tribolium castaneum telomerase rever... 21 8.2 DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase rever... 21 8.2 AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 21 8.2 AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 21 8.2 AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A prot... 21 8.2 AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII pr... 21 8.2 AF017414-2|AAB70261.1| 150|Tribolium castaneum abdominal-A prot... 21 8.2 AF017414-1|AAB70260.1| 209|Tribolium castaneum abdominal-AII pr... 21 8.2 >DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation protein. Length = 947 Score = 22.6 bits (46), Expect = 3.6 Identities = 9/16 (56%), Positives = 12/16 (75%) Frame = +1 Query: 502 LEEVVRRKKTHWETRL 549 L+EVVR KK H+E + Sbjct: 342 LQEVVRVKKPHYELNM 357 >DQ494421-1|ABF55372.1| 73|Tribolium castaneum telomerase reverse transcriptase protein. Length = 73 Score = 21.4 bits (43), Expect = 8.2 Identities = 7/24 (29%), Positives = 14/24 (58%) Frame = +3 Query: 417 LHPRYPCHSSVTLRQLRLCSQHAT 488 ++ +Y ++ L+ RLC +H T Sbjct: 19 VNSKYNSILNIALKNFRLCKKHKT 42 >DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase reverse transcriptase protein. Length = 596 Score = 21.4 bits (43), Expect = 8.2 Identities = 7/24 (29%), Positives = 14/24 (58%) Frame = +3 Query: 417 LHPRYPCHSSVTLRQLRLCSQHAT 488 ++ +Y ++ L+ RLC +H T Sbjct: 19 VNSKYNSILNIALKNFRLCKKHKT 42 >AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. Length = 790 Score = 21.4 bits (43), Expect = 8.2 Identities = 9/26 (34%), Positives = 13/26 (50%) Frame = +2 Query: 113 VSHIRNVCDRLNEEQNGCGKKWFPHM 190 V H N+ D N + G+K PH+ Sbjct: 454 VDHKNNLGDSKNNQDGNNGEKKKPHI 479 >AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. Length = 682 Score = 21.4 bits (43), Expect = 8.2 Identities = 9/26 (34%), Positives = 13/26 (50%) Frame = +2 Query: 113 VSHIRNVCDRLNEEQNGCGKKWFPHM 190 V H N+ D N + G+K PH+ Sbjct: 346 VDHKNNLGDSKNNQDGNNGEKKKPHI 371 >AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A protein. Length = 284 Score = 21.4 bits (43), Expect = 8.2 Identities = 7/12 (58%), Positives = 10/12 (83%) Frame = +1 Query: 262 NRPAANGGSPLP 297 ++PAA GG P+P Sbjct: 117 SQPAAPGGQPIP 128 >AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII protein. Length = 343 Score = 21.4 bits (43), Expect = 8.2 Identities = 7/12 (58%), Positives = 10/12 (83%) Frame = +1 Query: 262 NRPAANGGSPLP 297 ++PAA GG P+P Sbjct: 176 SQPAAPGGQPIP 187 >AF017414-2|AAB70261.1| 150|Tribolium castaneum abdominal-A protein. Length = 150 Score = 21.4 bits (43), Expect = 8.2 Identities = 7/12 (58%), Positives = 10/12 (83%) Frame = +1 Query: 262 NRPAANGGSPLP 297 ++PAA GG P+P Sbjct: 117 SQPAAPGGQPIP 128 >AF017414-1|AAB70260.1| 209|Tribolium castaneum abdominal-AII protein. Length = 209 Score = 21.4 bits (43), Expect = 8.2 Identities = 7/12 (58%), Positives = 10/12 (83%) Frame = +1 Query: 262 NRPAANGGSPLP 297 ++PAA GG P+P Sbjct: 176 SQPAAPGGQPIP 187 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 181,256 Number of Sequences: 336 Number of extensions: 4056 Number of successful extensions: 13 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 13 length of database: 122,585 effective HSP length: 56 effective length of database: 103,769 effective search space used: 20650031 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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