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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0620
         (769 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   3.6  
DQ494421-1|ABF55372.1|   73|Tribolium castaneum telomerase rever...    21   8.2  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   8.2  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   8.2  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   8.2  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   8.2  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   8.2  
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    21   8.2  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   8.2  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +1

Query: 502 LEEVVRRKKTHWETRL 549
           L+EVVR KK H+E  +
Sbjct: 342 LQEVVRVKKPHYELNM 357


>DQ494421-1|ABF55372.1|   73|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 73

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +3

Query: 417 LHPRYPCHSSVTLRQLRLCSQHAT 488
           ++ +Y    ++ L+  RLC +H T
Sbjct: 19  VNSKYNSILNIALKNFRLCKKHKT 42


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +3

Query: 417 LHPRYPCHSSVTLRQLRLCSQHAT 488
           ++ +Y    ++ L+  RLC +H T
Sbjct: 19  VNSKYNSILNIALKNFRLCKKHKT 42


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +2

Query: 113 VSHIRNVCDRLNEEQNGCGKKWFPHM 190
           V H  N+ D  N +    G+K  PH+
Sbjct: 454 VDHKNNLGDSKNNQDGNNGEKKKPHI 479


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +2

Query: 113 VSHIRNVCDRLNEEQNGCGKKWFPHM 190
           V H  N+ D  N +    G+K  PH+
Sbjct: 346 VDHKNNLGDSKNNQDGNNGEKKKPHI 371


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +1

Query: 262 NRPAANGGSPLP 297
           ++PAA GG P+P
Sbjct: 117 SQPAAPGGQPIP 128


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +1

Query: 262 NRPAANGGSPLP 297
           ++PAA GG P+P
Sbjct: 176 SQPAAPGGQPIP 187


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +1

Query: 262 NRPAANGGSPLP 297
           ++PAA GG P+P
Sbjct: 117 SQPAAPGGQPIP 128


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +1

Query: 262 NRPAANGGSPLP 297
           ++PAA GG P+P
Sbjct: 176 SQPAAPGGQPIP 187


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,256
Number of Sequences: 336
Number of extensions: 4056
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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