Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0620
         (769 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.        25   1.9  
AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.        25   1.9  
AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.        25   1.9  
AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.        25   1.9  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    25   1.9  
AY423354-1|AAQ94040.1|  112|Anopheles gambiae defender against p...    25   3.4  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   7.9  

>AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -2

Query: 246 NNCGCKSDTMLCVQRASSTMCGNH 175
           +NC C +DT  C   ++  +C  H
Sbjct: 16  DNCECTTDTTGCKAPSNDAVCSGH 39


>AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -2

Query: 246 NNCGCKSDTMLCVQRASSTMCGNH 175
           +NC C +DT  C   ++  +C  H
Sbjct: 16  DNCECTTDTTGCKAPSNDAVCSGH 39


>AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -2

Query: 246 NNCGCKSDTMLCVQRASSTMCGNH 175
           +NC C +DT  C   ++  +C  H
Sbjct: 16  DNCECTTDTTGCKAPSNDAVCSGH 39


>AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -2

Query: 246 NNCGCKSDTMLCVQRASSTMCGNH 175
           +NC C +DT  C   ++  +C  H
Sbjct: 16  DNCECTTDTTGCKAPSNDAVCSGH 39


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -2

Query: 246 NNCGCKSDTMLCVQRASSTMCGNH 175
           +NC C +DT  C   ++  +C  H
Sbjct: 592 DNCECTTDTTGCKAPSNDAVCSGH 615


>AY423354-1|AAQ94040.1|  112|Anopheles gambiae defender against
           programmed cell death protein.
          Length = 112

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -1

Query: 94  CCVIAAFHFGDRLDAFVSHKRCY 26
           CC++  F F   L  F+S   C+
Sbjct: 44  CCLVGTFPFNSFLAGFISTVSCF 66


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 7/57 (12%)
 Frame = -3

Query: 281 PFAAGRLLGLSLITVVVS-------PIQCCASRGPALPCVETISCRSRFVPRLTYHR 132
           P AAG LL L  +    +        +  C  +     C++T +CR   +P  T+ R
Sbjct: 7   PMAAGALLLLVALVADTTLGQLSNYQLTTCPGKTTCSQCIQTTNCRWCTMPNFTHPR 63


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 819,380
Number of Sequences: 2352
Number of extensions: 19064
Number of successful extensions: 268
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 268
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79834176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)