Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0620
(769 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U20980-1|AAA76737.1| 559|Homo sapiens chromatin assembly factor... 33 0.85
BC021218-1|AAH21218.1| 559|Homo sapiens chromatin assembly fact... 33 0.85
AP001725-3|BAA95549.1| 559|Homo sapiens chromatin assembly fact... 33 0.85
AP000694-1|BAA89426.1| 559|Homo sapiens chromatin assembly fact... 33 0.85
M60255-1|AAA36594.1| 527|Homo sapiens cerebroside sulfate activ... 32 2.0
BC099650-1|AAH99650.1| 907|Homo sapiens leucine-rich repeat-con... 31 3.4
BC096326-1|AAH96326.1| 883|Homo sapiens LGR5 protein protein. 31 3.4
BC096325-1|AAH96325.1| 883|Homo sapiens LGR5 protein protein. 31 3.4
BC096324-1|AAH96324.1| 907|Homo sapiens leucine-rich repeat-con... 31 3.4
AF062006-1|AAC28019.1| 907|Homo sapiens orphan G protein-couple... 31 3.4
AF061444-1|AAC77911.1| 907|Homo sapiens G protein-coupled recep... 31 3.4
D00422-1|BAA00321.1| 527|Homo sapiens sphingolipid activator pr... 31 4.5
AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ... 31 4.5
AB209776-1|BAD93013.1| 530|Homo sapiens prosaposin variant prot... 31 4.5
BC033039-1|AAH33039.1| 927|Homo sapiens LGR4 protein protein. 30 7.9
AF346711-1|AAK31153.1| 951|Homo sapiens G-protein couple recept... 30 7.9
AF257182-1|AAF68989.1| 951|Homo sapiens G-protein-coupled recep... 30 7.9
AB209743-1|BAD92980.1| 1032|Homo sapiens Leucine-rich repeat-con... 30 7.9
>U20980-1|AAA76737.1| 559|Homo sapiens chromatin assembly factor-I
p60 subunit protein.
Length = 559
Score = 33.5 bits (73), Expect = 0.85
Identities = 22/63 (34%), Positives = 29/63 (46%)
Frame = +1
Query: 151 GTKRLRQEMVSTHGRAGPLDAQHCIGLTTTVIRERPNNRPAANGGSPLPSDESNLEPPAT 330
GT R + S+ G P Q TVIR+ P+ PA P PS+E L+P +
Sbjct: 418 GTPASRTQDPSSPGTTPPQARQ---APAPTVIRDPPSITPAVKSPLPGPSEEKTLQPSSQ 474
Query: 331 NGK 339
N K
Sbjct: 475 NTK 477
>BC021218-1|AAH21218.1| 559|Homo sapiens chromatin assembly factor
1, subunit B (p60) protein.
Length = 559
Score = 33.5 bits (73), Expect = 0.85
Identities = 22/63 (34%), Positives = 29/63 (46%)
Frame = +1
Query: 151 GTKRLRQEMVSTHGRAGPLDAQHCIGLTTTVIRERPNNRPAANGGSPLPSDESNLEPPAT 330
GT R + S+ G P Q TVIR+ P+ PA P PS+E L+P +
Sbjct: 418 GTPASRTQDPSSPGTTPPQARQ---APAPTVIRDPPSITPAVKSPLPGPSEEKTLQPSSQ 474
Query: 331 NGK 339
N K
Sbjct: 475 NTK 477
>AP001725-3|BAA95549.1| 559|Homo sapiens chromatin assembly
factor-I p60 subunit protein.
Length = 559
Score = 33.5 bits (73), Expect = 0.85
Identities = 22/63 (34%), Positives = 29/63 (46%)
Frame = +1
Query: 151 GTKRLRQEMVSTHGRAGPLDAQHCIGLTTTVIRERPNNRPAANGGSPLPSDESNLEPPAT 330
GT R + S+ G P Q TVIR+ P+ PA P PS+E L+P +
Sbjct: 418 GTPASRTQDPSSPGTTPPQARQ---APAPTVIRDPPSITPAVKSPLPGPSEEKTLQPSSQ 474
Query: 331 NGK 339
N K
Sbjct: 475 NTK 477
>AP000694-1|BAA89426.1| 559|Homo sapiens chromatin assembly factor
1, subunit B (p60) protein.
Length = 559
Score = 33.5 bits (73), Expect = 0.85
Identities = 22/63 (34%), Positives = 29/63 (46%)
Frame = +1
Query: 151 GTKRLRQEMVSTHGRAGPLDAQHCIGLTTTVIRERPNNRPAANGGSPLPSDESNLEPPAT 330
GT R + S+ G P Q TVIR+ P+ PA P PS+E L+P +
Sbjct: 418 GTPASRTQDPSSPGTTPPQARQ---APAPTVIRDPPSITPAVKSPLPGPSEEKTLQPSSQ 474
Query: 331 NGK 339
N K
Sbjct: 475 NTK 477
>M60255-1|AAA36594.1| 527|Homo sapiens cerebroside sulfate
activator protein protein.
Length = 527
Score = 32.3 bits (70), Expect = 2.0
Identities = 15/69 (21%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +2
Query: 38 MADECVQAIPEMEGSDYTAREYLN-FVSHIRNVCDRLNEEQNGCGKKWFPHMVELALWTH 214
+ +C+Q + +++ + T ++ V H++ CDRL K + E+A+
Sbjct: 197 VCQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPGMADISKNYISQYSEIAIQMM 256
Query: 215 NIVSDLQPQ 241
+ D QP+
Sbjct: 257 MHMQDQQPK 265
>BC099650-1|AAH99650.1| 907|Homo sapiens leucine-rich
repeat-containing G protein-coupled receptor 5 protein.
Length = 907
Score = 31.5 bits (68), Expect = 3.4
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -1
Query: 628 GVWWGTARGCQCVAFLSFFAMLGSV 554
G WW GC + FLS FA SV
Sbjct: 628 GAWWENGVGCHVIGFLSIFASESSV 652
>BC096326-1|AAH96326.1| 883|Homo sapiens LGR5 protein protein.
Length = 883
Score = 31.5 bits (68), Expect = 3.4
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -1
Query: 628 GVWWGTARGCQCVAFLSFFAMLGSV 554
G WW GC + FLS FA SV
Sbjct: 604 GAWWENGVGCHVIGFLSIFASESSV 628
>BC096325-1|AAH96325.1| 883|Homo sapiens LGR5 protein protein.
Length = 883
Score = 31.5 bits (68), Expect = 3.4
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -1
Query: 628 GVWWGTARGCQCVAFLSFFAMLGSV 554
G WW GC + FLS FA SV
Sbjct: 604 GAWWENGVGCHVIGFLSIFASESSV 628
>BC096324-1|AAH96324.1| 907|Homo sapiens leucine-rich
repeat-containing G protein-coupled receptor 5 protein.
Length = 907
Score = 31.5 bits (68), Expect = 3.4
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -1
Query: 628 GVWWGTARGCQCVAFLSFFAMLGSV 554
G WW GC + FLS FA SV
Sbjct: 628 GAWWENGVGCHVIGFLSIFASESSV 652
>AF062006-1|AAC28019.1| 907|Homo sapiens orphan G protein-coupled
receptor HG38 protein.
Length = 907
Score = 31.5 bits (68), Expect = 3.4
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -1
Query: 628 GVWWGTARGCQCVAFLSFFAMLGSV 554
G WW GC + FLS FA SV
Sbjct: 628 GAWWENGVGCHVIGFLSIFASESSV 652
>AF061444-1|AAC77911.1| 907|Homo sapiens G protein-coupled receptor
LGR5 protein.
Length = 907
Score = 31.5 bits (68), Expect = 3.4
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -1
Query: 628 GVWWGTARGCQCVAFLSFFAMLGSV 554
G WW GC + FLS FA SV
Sbjct: 628 GAWWENGVGCHVIGFLSIFASESSV 652
>D00422-1|BAA00321.1| 527|Homo sapiens sphingolipid activator
proteins protein.
Length = 527
Score = 31.1 bits (67), Expect = 4.5
Identities = 15/69 (21%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +2
Query: 38 MADECVQAIPEMEGSDYTAREYLN-FVSHIRNVCDRLNEEQNGCGKKWFPHMVELALWTH 214
+ +C+Q + +++ + T ++ V H++ CDRL K + E+A+
Sbjct: 197 VCQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPGMADICKNYISQYSEIAIQMM 256
Query: 215 NIVSDLQPQ 241
+ D QP+
Sbjct: 257 MHMQDQQPK 265
>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
marker CA125 protein.
Length = 22152
Score = 31.1 bits (67), Expect = 4.5
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = +1
Query: 268 PAANGGSPLPSDESNLEPPATNGKLVTDCVNEDTTTSCTE 387
PAA GSP S NL PAT +TD T T+
Sbjct: 1361 PAAYSGSPKISSSPNLTSPATKAWTITDTTEHSTQLHYTK 1400
>AB209776-1|BAD93013.1| 530|Homo sapiens prosaposin variant
protein.
Length = 530
Score = 31.1 bits (67), Expect = 4.5
Identities = 15/69 (21%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +2
Query: 38 MADECVQAIPEMEGSDYTAREYLN-FVSHIRNVCDRLNEEQNGCGKKWFPHMVELALWTH 214
+ +C+Q + +++ + T ++ V H++ CDRL K + E+A+
Sbjct: 200 VCQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPGMADICKNYISQYSEIAIQMM 259
Query: 215 NIVSDLQPQ 241
+ D QP+
Sbjct: 260 MHMQDQQPK 268
>BC033039-1|AAH33039.1| 927|Homo sapiens LGR4 protein protein.
Length = 927
Score = 30.3 bits (65), Expect = 7.9
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -1
Query: 628 GVWWGTARGCQCVAFLSFFA 569
G+WW T GC+ FL+ F+
Sbjct: 585 GIWWETGSGCKVAGFLAVFS 604
>AF346711-1|AAK31153.1| 951|Homo sapiens G-protein couple receptor
protein.
Length = 951
Score = 30.3 bits (65), Expect = 7.9
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -1
Query: 628 GVWWGTARGCQCVAFLSFFA 569
G+WW T GC+ FL+ F+
Sbjct: 609 GIWWETGSGCKVAGFLAVFS 628
>AF257182-1|AAF68989.1| 951|Homo sapiens G-protein-coupled receptor
48 protein.
Length = 951
Score = 30.3 bits (65), Expect = 7.9
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -1
Query: 628 GVWWGTARGCQCVAFLSFFA 569
G+WW T GC+ FL+ F+
Sbjct: 609 GIWWETGSGCKVAGFLAVFS 628
>AB209743-1|BAD92980.1| 1032|Homo sapiens Leucine-rich
repeat-containing G protein-coupled receptor 4 precursor
variant protein.
Length = 1032
Score = 30.3 bits (65), Expect = 7.9
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -1
Query: 628 GVWWGTARGCQCVAFLSFFA 569
G+WW T GC+ FL+ F+
Sbjct: 690 GIWWETGSGCKVAGFLAVFS 709
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,519,908
Number of Sequences: 237096
Number of extensions: 2611080
Number of successful extensions: 9850
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 9582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9850
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9255747988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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