Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0620
(769 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 32 0.52
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 32 0.52
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 32 0.52
Z73971-1|CAA98249.2| 929|Caenorhabditis elegans Hypothetical pr... 31 0.90
AF224743-1|AAF82248.1| 929|Caenorhabditis elegans leucine-rich ... 31 0.90
AF016449-11|AAG23992.1| 353|Caenorhabditis elegans Serpentine r... 30 2.1
U61945-3|AAB03126.2| 451|Caenorhabditis elegans Hypothetical pr... 29 3.6
AF016449-9|AAG23993.2| 351|Caenorhabditis elegans Serpentine re... 29 4.8
Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical pr... 28 6.4
AL034365-4|CAA22262.1| 375|Caenorhabditis elegans Hypothetical ... 28 6.4
AF016449-13|AAG24003.1| 350|Caenorhabditis elegans Serpentine r... 28 6.4
Z73425-5|CAA97787.1| 427|Caenorhabditis elegans Hypothetical pr... 28 8.4
AF026210-3|AAB71286.3| 382|Caenorhabditis elegans Hypothetical ... 28 8.4
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 31.9 bits (69), Expect = 0.52
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +1
Query: 175 MVSTHGRAGPLDAQHC-IGLTTTVIRERPNNRPAANGGSPLPSDESNLEPPATNGKLVTD 351
+VS G P DA IG I + RP + GSPLP+D S +G+ VTD
Sbjct: 7639 IVSPDGSPLPTDASGAAIGPDGEPIPTDSSGRPISKDGSPLPTDASGNYILVPSGEGVTD 7698
Query: 352 CVNED 366
+ D
Sbjct: 7699 SLPTD 7703
Score = 31.9 bits (69), Expect = 0.52
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +1
Query: 175 MVSTHGRAGPLDAQHC-IGLTTTVIRERPNNRPAANGGSPLPSDESNLEPPATNGKLVTD 351
+VS G P DA IG I + RP + GSPLP+D S +G+ VTD
Sbjct: 8413 IVSPDGSPLPTDASGAAIGPDGEPIPTDSSGRPISKDGSPLPTDASGNYILVPSGEGVTD 8472
Query: 352 CVNED 366
+ D
Sbjct: 8473 SLPTD 8477
Score = 31.9 bits (69), Expect = 0.52
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +1
Query: 175 MVSTHGRAGPLDAQHC-IGLTTTVIRERPNNRPAANGGSPLPSDESNLEPPATNGKLVTD 351
+VS G P DA IG I + RP + GSPLP+D S +G+ VTD
Sbjct: 10176 IVSPDGSPLPTDASGAAIGPDGEPIPTDSSGRPISKDGSPLPTDASGNYILVPSGEGVTD 10235
Query: 352 CVNED 366
+ D
Sbjct: 10236 SLPTD 10240
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +1
Query: 175 MVSTHGRAGPLDAQHC-IGLTTTVIRERPNNRPAANGGSPLPSDESNLEPPATNGKLVTD 351
+VS G P DA IG I N RP A GSPLP+D + +G+ D
Sbjct: 6920 IVSPDGSPLPTDASGAAIGPDGEPIPTDSNGRPLAKDGSPLPTDNNGRYVILPSGRYSGD 6979
Query: 352 CVNED 366
D
Sbjct: 6980 TETTD 6984
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +1
Query: 175 MVSTHGRAGPLDAQHC-IGLTTTVIRERPNNRPAANGGSPLPSDESNLEPPATNGKLVTD 351
+VS G P DA IG I N RP A GSPLP+D + +G+ D
Sbjct: 9457 IVSPDGSPLPTDASGAAIGPDGEPIPTDSNGRPLAKDGSPLPTDNNGRYVILPSGRYSGD 9516
Query: 352 CVNED 366
D
Sbjct: 9517 TETTD 9521
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +1
Query: 175 MVSTHGRAGPLDAQHC-IGLTTTVIRERPNNRPAANGGSPLPSDES 309
+VS G P DA IGL + + +P A GSPLP+D +
Sbjct: 2329 IVSPDGTPLPTDASGSPIGLDGQPVPTDASGKPLAKDGSPLPTDNN 2374
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
protein K07E12.1a protein.
Length = 13100
Score = 31.9 bits (69), Expect = 0.52
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +1
Query: 175 MVSTHGRAGPLDAQHC-IGLTTTVIRERPNNRPAANGGSPLPSDESNLEPPATNGKLVTD 351
+VS G P DA IG I + RP + GSPLP+D S +G+ VTD
Sbjct: 7684 IVSPDGSPLPTDASGAAIGPDGEPIPTDSSGRPISKDGSPLPTDASGNYILVPSGEGVTD 7743
Query: 352 CVNED 366
+ D
Sbjct: 7744 SLPTD 7748
Score = 31.9 bits (69), Expect = 0.52
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +1
Query: 175 MVSTHGRAGPLDAQHC-IGLTTTVIRERPNNRPAANGGSPLPSDESNLEPPATNGKLVTD 351
+VS G P DA IG I + RP + GSPLP+D S +G+ VTD
Sbjct: 8458 IVSPDGSPLPTDASGAAIGPDGEPIPTDSSGRPISKDGSPLPTDASGNYILVPSGEGVTD 8517
Query: 352 CVNED 366
+ D
Sbjct: 8518 SLPTD 8522
Score = 31.9 bits (69), Expect = 0.52
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +1
Query: 175 MVSTHGRAGPLDAQHC-IGLTTTVIRERPNNRPAANGGSPLPSDESNLEPPATNGKLVTD 351
+VS G P DA IG I + RP + GSPLP+D S +G+ VTD
Sbjct: 10221 IVSPDGSPLPTDASGAAIGPDGEPIPTDSSGRPISKDGSPLPTDASGNYILVPSGEGVTD 10280
Query: 352 CVNED 366
+ D
Sbjct: 10281 SLPTD 10285
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +1
Query: 175 MVSTHGRAGPLDAQHC-IGLTTTVIRERPNNRPAANGGSPLPSDESNLEPPATNGKLVTD 351
+VS G P DA IG I N RP A GSPLP+D + +G+ D
Sbjct: 6965 IVSPDGSPLPTDASGAAIGPDGEPIPTDSNGRPLAKDGSPLPTDNNGRYVILPSGRYSGD 7024
Query: 352 CVNED 366
D
Sbjct: 7025 TETTD 7029
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +1
Query: 175 MVSTHGRAGPLDAQHC-IGLTTTVIRERPNNRPAANGGSPLPSDESNLEPPATNGKLVTD 351
+VS G P DA IG I N RP A GSPLP+D + +G+ D
Sbjct: 9502 IVSPDGSPLPTDASGAAIGPDGEPIPTDSNGRPLAKDGSPLPTDNNGRYVILPSGRYSGD 9561
Query: 352 CVNED 366
D
Sbjct: 9562 TETTD 9566
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +1
Query: 175 MVSTHGRAGPLDAQHC-IGLTTTVIRERPNNRPAANGGSPLPSDES 309
+VS G P DA IGL + + +P A GSPLP+D +
Sbjct: 2392 IVSPDGTPLPTDASGSPIGLDGQPVPTDASGKPLAKDGSPLPTDNN 2437
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
protein.
Length = 13100
Score = 31.9 bits (69), Expect = 0.52
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +1
Query: 175 MVSTHGRAGPLDAQHC-IGLTTTVIRERPNNRPAANGGSPLPSDESNLEPPATNGKLVTD 351
+VS G P DA IG I + RP + GSPLP+D S +G+ VTD
Sbjct: 7684 IVSPDGSPLPTDASGAAIGPDGEPIPTDSSGRPISKDGSPLPTDASGNYILVPSGEGVTD 7743
Query: 352 CVNED 366
+ D
Sbjct: 7744 SLPTD 7748
Score = 31.9 bits (69), Expect = 0.52
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +1
Query: 175 MVSTHGRAGPLDAQHC-IGLTTTVIRERPNNRPAANGGSPLPSDESNLEPPATNGKLVTD 351
+VS G P DA IG I + RP + GSPLP+D S +G+ VTD
Sbjct: 8458 IVSPDGSPLPTDASGAAIGPDGEPIPTDSSGRPISKDGSPLPTDASGNYILVPSGEGVTD 8517
Query: 352 CVNED 366
+ D
Sbjct: 8518 SLPTD 8522
Score = 31.9 bits (69), Expect = 0.52
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +1
Query: 175 MVSTHGRAGPLDAQHC-IGLTTTVIRERPNNRPAANGGSPLPSDESNLEPPATNGKLVTD 351
+VS G P DA IG I + RP + GSPLP+D S +G+ VTD
Sbjct: 10221 IVSPDGSPLPTDASGAAIGPDGEPIPTDSSGRPISKDGSPLPTDASGNYILVPSGEGVTD 10280
Query: 352 CVNED 366
+ D
Sbjct: 10281 SLPTD 10285
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +1
Query: 175 MVSTHGRAGPLDAQHC-IGLTTTVIRERPNNRPAANGGSPLPSDESNLEPPATNGKLVTD 351
+VS G P DA IG I N RP A GSPLP+D + +G+ D
Sbjct: 6965 IVSPDGSPLPTDASGAAIGPDGEPIPTDSNGRPLAKDGSPLPTDNNGRYVILPSGRYSGD 7024
Query: 352 CVNED 366
D
Sbjct: 7025 TETTD 7029
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +1
Query: 175 MVSTHGRAGPLDAQHC-IGLTTTVIRERPNNRPAANGGSPLPSDESNLEPPATNGKLVTD 351
+VS G P DA IG I N RP A GSPLP+D + +G+ D
Sbjct: 9502 IVSPDGSPLPTDASGAAIGPDGEPIPTDSNGRPLAKDGSPLPTDNNGRYVILPSGRYSGD 9561
Query: 352 CVNED 366
D
Sbjct: 9562 TETTD 9566
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +1
Query: 175 MVSTHGRAGPLDAQHC-IGLTTTVIRERPNNRPAANGGSPLPSDES 309
+VS G P DA IGL + + +P A GSPLP+D +
Sbjct: 2392 IVSPDGTPLPTDASGSPIGLDGQPVPTDASGKPLAKDGSPLPTDNN 2437
>Z73971-1|CAA98249.2| 929|Caenorhabditis elegans Hypothetical
protein C50H2.1 protein.
Length = 929
Score = 31.1 bits (67), Expect = 0.90
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -1
Query: 637 YLRGVWWGTARGCQCVAFLSFFA 569
Y VWW T GC+ FL+ FA
Sbjct: 498 YRHAVWWQTGWGCRAAGFLAVFA 520
>AF224743-1|AAF82248.1| 929|Caenorhabditis elegans leucine-rich
repeat-containingG protein-coupled receptor protein.
Length = 929
Score = 31.1 bits (67), Expect = 0.90
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -1
Query: 637 YLRGVWWGTARGCQCVAFLSFFA 569
Y VWW T GC+ FL+ FA
Sbjct: 498 YRHAVWWQTGWGCRAAGFLAVFA 520
>AF016449-11|AAG23992.1| 353|Caenorhabditis elegans Serpentine
receptor, class t protein7 protein.
Length = 353
Score = 29.9 bits (64), Expect = 2.1
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -1
Query: 625 VWWGTARGCQCVAFLSF 575
+ WG + GC C+A+LSF
Sbjct: 276 ILWGWSSGCMCIAYLSF 292
>U61945-3|AAB03126.2| 451|Caenorhabditis elegans Hypothetical
protein C49C8.5 protein.
Length = 451
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/62 (29%), Positives = 24/62 (38%)
Frame = +1
Query: 193 RAGPLDAQHCIGLTTTVIRERPNNRPAANGGSPLPSDESNLEPPATNGKLVTDCVNEDTT 372
R G L I T + G +P P EPP T KL +DC ++T
Sbjct: 144 RPGTLSTTISIAWATNIPPPSETTTTEITGTTPTPGPT---EPPTTTAKLPSDCDEVEST 200
Query: 373 TS 378
+S
Sbjct: 201 SS 202
>AF016449-9|AAG23993.2| 351|Caenorhabditis elegans Serpentine
receptor, class t protein9 protein.
Length = 351
Score = 28.7 bits (61), Expect = 4.8
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -1
Query: 634 LRGVWWGTARGCQCVAFLSF 575
L + WG + GC C+A+L+F
Sbjct: 271 LSHIIWGWSSGCMCIAYLTF 290
>Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical
protein T07D4.3 protein.
Length = 1301
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/79 (22%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Frame = +1
Query: 175 MVSTHGRAGPLDAQHCIGLTTTV--IRERPNNRPAANGGSPLPSD---ESNLEPPATNGK 339
+++ HGR P+ + + + + + E P+ + GG P P D + ++ N
Sbjct: 559 VITMHGRTFPVQSFYLEDILHNLQHMPEEPDQKKRKKGGPPPPDDDEGDEEVDDKGRNMN 618
Query: 340 LVTD-CVNEDTTTSCTEDS 393
++TD +NE T+ + S
Sbjct: 619 ILTDPSINESLKTAMSRIS 637
>AL034365-4|CAA22262.1| 375|Caenorhabditis elegans Hypothetical
protein Y69E1A.4 protein.
Length = 375
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 202 PLDAQHCIGLTTTVIRERPNN-RPAANGGSPLPSDESNLEPPATNGKLVTDCVNEDTTT 375
PL +Q L T +R R RP + S P ++++PP K VN++ TT
Sbjct: 88 PLSSQEFEALKDTTVRSRETGKRPQSEPHSTQPESSNDVKPPVAAPK----SVNKEVTT 142
>AF016449-13|AAG24003.1| 350|Caenorhabditis elegans Serpentine
receptor, class t protein8 protein.
Length = 350
Score = 28.3 bits (60), Expect = 6.4
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -1
Query: 619 WGTARGCQCVAFLSF 575
WG + GC C+A+L+F
Sbjct: 278 WGWSSGCMCIAYLAF 292
>Z73425-5|CAA97787.1| 427|Caenorhabditis elegans Hypothetical
protein F12F6.9 protein.
Length = 427
Score = 27.9 bits (59), Expect = 8.4
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +1
Query: 202 PLDAQHCIGLTTTVIRERPNNRPAANGGSPLPSDESNLEPPATNGKLVTDCVNEDTTTSC 381
PL+ + G + +R P P++ P S + EP + + +VTD TT +
Sbjct: 258 PLELELLKGKHSKSVRPSPPASPSSTS-QPTTSATTTSEPLSPSTTIVTDAPELVTTETS 316
Query: 382 TED 390
TED
Sbjct: 317 TED 319
>AF026210-3|AAB71286.3| 382|Caenorhabditis elegans Hypothetical
protein F48A11.4 protein.
Length = 382
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -1
Query: 418 RVMRLSRPSSLLCTTSWYPHSRSPLRVYRLSL 323
R+ ++RPSS++CT +S++PLR L L
Sbjct: 284 RMRVITRPSSVICTVFAVNNSQAPLRSQFLKL 315
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,735,556
Number of Sequences: 27780
Number of extensions: 394804
Number of successful extensions: 1334
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1325
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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