Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0619
(724 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 146 1e-35
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 146 1e-35
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 146 1e-35
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 146 1e-35
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 145 3e-35
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 144 5e-35
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 143 9e-35
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 143 9e-35
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 142 2e-34
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 78 7e-15
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 78 7e-15
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 77 9e-15
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 77 9e-15
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 77 9e-15
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 77 9e-15
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 76 2e-14
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 63 2e-10
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 63 2e-10
At5g20860.1 68418.m02477 pectinesterase family protein contains ... 32 0.33
At4g37190.1 68417.m05265 expressed protein 31 0.58
At1g33360.1 68414.m04129 ATP-dependent Clp protease ATP-binding ... 31 0.58
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 31 1.0
At4g37380.1 68417.m05293 pentatricopeptide (PPR) repeat-containi... 30 1.4
At4g22070.1 68417.m03192 WRKY family transcription factor identi... 29 3.1
At2g37740.1 68415.m04629 zinc finger (C2H2 type) family protein ... 29 4.1
At3g57880.1 68416.m06452 C2 domain-containing protein contains I... 28 7.2
At1g51570.1 68414.m05804 C2 domain-containing protein contains I... 28 7.2
At1g22610.1 68414.m02823 C2 domain-containing protein contains I... 28 7.2
At1g21850.1 68414.m02735 multi-copper oxidase type I family prot... 28 7.2
At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putati... 27 9.5
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 146 bits (355), Expect = 1e-35
Identities = 64/67 (95%), Positives = 67/67 (100%)
Frame = +1
Query: 256 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 435
LEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+C
Sbjct: 68 LEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127
Query: 436 DCLQGFQ 456
DCLQGFQ
Sbjct: 128 DCLQGFQ 134
Score = 129 bits (312), Expect = 2e-30
Identities = 59/71 (83%), Positives = 65/71 (91%)
Frame = +3
Query: 510 SKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICF 689
SKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICF
Sbjct: 153 SKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICF 212
Query: 690 RTLKLSTPTYG 722
RTLKL+TP++G
Sbjct: 213 RTLKLTTPSFG 223
Score = 119 bits (286), Expect = 2e-27
Identities = 50/70 (71%), Positives = 60/70 (85%)
Frame = +2
Query: 56 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 235
MREI+HIQ GQCGNQIGAKFWE++ EHGID TG Y G++DLQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60
Query: 236 PRAILVAWSP 265
PRA+L+ P
Sbjct: 61 PRAVLMDLEP 70
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 146 bits (355), Expect = 1e-35
Identities = 64/67 (95%), Positives = 67/67 (100%)
Frame = +1
Query: 256 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 435
LEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+C
Sbjct: 68 LEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127
Query: 436 DCLQGFQ 456
DCLQGFQ
Sbjct: 128 DCLQGFQ 134
Score = 129 bits (312), Expect = 2e-30
Identities = 59/71 (83%), Positives = 64/71 (90%)
Frame = +3
Query: 510 SKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICF 689
SKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICF
Sbjct: 153 SKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICF 212
Query: 690 RTLKLSTPTYG 722
RTLKL+ PT+G
Sbjct: 213 RTLKLANPTFG 223
Score = 122 bits (293), Expect = 3e-28
Identities = 54/70 (77%), Positives = 60/70 (85%)
Frame = +2
Query: 56 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 235
MREI+HIQ GQCGNQIGAKFWE+I EHGID TG GD+DLQLERINVY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60
Query: 236 PRAILVAWSP 265
PRA+L+ P
Sbjct: 61 PRAVLMDLEP 70
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 146 bits (355), Expect = 1e-35
Identities = 64/67 (95%), Positives = 67/67 (100%)
Frame = +1
Query: 256 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 435
LEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+C
Sbjct: 68 LEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127
Query: 436 DCLQGFQ 456
DCLQGFQ
Sbjct: 128 DCLQGFQ 134
Score = 131 bits (316), Expect = 5e-31
Identities = 60/71 (84%), Positives = 65/71 (91%)
Frame = +3
Query: 510 SKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICF 689
SKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICF
Sbjct: 153 SKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICF 212
Query: 690 RTLKLSTPTYG 722
RTLKLSTP++G
Sbjct: 213 RTLKLSTPSFG 223
Score = 119 bits (287), Expect = 2e-27
Identities = 51/70 (72%), Positives = 61/70 (87%)
Frame = +2
Query: 56 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 235
MREI+HIQ GQCGNQIG+KFWE+++ EHGID TG Y GDS+LQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60
Query: 236 PRAILVAWSP 265
PRA+L+ P
Sbjct: 61 PRAVLMDLEP 70
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 146 bits (354), Expect = 1e-35
Identities = 63/67 (94%), Positives = 67/67 (100%)
Frame = +1
Query: 256 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 435
LEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRKEAE+C
Sbjct: 69 LEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENC 128
Query: 436 DCLQGFQ 456
DCLQGFQ
Sbjct: 129 DCLQGFQ 135
Score = 130 bits (315), Expect = 7e-31
Identities = 60/71 (84%), Positives = 65/71 (91%)
Frame = +3
Query: 510 SKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICF 689
SKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICF
Sbjct: 154 SKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICF 213
Query: 690 RTLKLSTPTYG 722
RTLKLSTP++G
Sbjct: 214 RTLKLSTPSFG 224
Score = 124 bits (298), Expect = 8e-29
Identities = 55/71 (77%), Positives = 62/71 (87%), Gaps = 1/71 (1%)
Frame = +2
Query: 56 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGD-SDLQLERINVYYNEASGGKY 232
MREI+HIQ GQCGNQIG+KFWE+I DEHGID TG Y GD +DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60
Query: 233 VPRAILVAWSP 265
VPRA+L+ P
Sbjct: 61 VPRAVLMDLEP 71
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 145 bits (351), Expect = 3e-35
Identities = 62/67 (92%), Positives = 67/67 (100%)
Frame = +1
Query: 256 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 435
LEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRKEAE+C
Sbjct: 69 LEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENC 128
Query: 436 DCLQGFQ 456
DCLQGFQ
Sbjct: 129 DCLQGFQ 135
Score = 130 bits (315), Expect = 7e-31
Identities = 60/71 (84%), Positives = 65/71 (91%)
Frame = +3
Query: 510 SKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICF 689
SKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICF
Sbjct: 154 SKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICF 213
Query: 690 RTLKLSTPTYG 722
RTLKLSTP++G
Sbjct: 214 RTLKLSTPSFG 224
Score = 128 bits (309), Expect = 4e-30
Identities = 55/71 (77%), Positives = 64/71 (90%), Gaps = 1/71 (1%)
Frame = +2
Query: 56 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKY 232
MREI+H+Q GQCGNQIG+KFWE+I DEHG+DPTG Y+GDS DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60
Query: 233 VPRAILVAWSP 265
VPRA+L+ P
Sbjct: 61 VPRAVLMDLEP 71
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 144 bits (349), Expect = 5e-35
Identities = 62/67 (92%), Positives = 67/67 (100%)
Frame = +1
Query: 256 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 435
LEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRKEAE+C
Sbjct: 68 LEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENC 127
Query: 436 DCLQGFQ 456
DCLQGFQ
Sbjct: 128 DCLQGFQ 134
Score = 129 bits (312), Expect = 2e-30
Identities = 59/71 (83%), Positives = 65/71 (91%)
Frame = +3
Query: 510 SKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICF 689
SKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICF
Sbjct: 153 SKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICF 212
Query: 690 RTLKLSTPTYG 722
RTLKL+TP++G
Sbjct: 213 RTLKLTTPSFG 223
Score = 126 bits (303), Expect = 2e-29
Identities = 54/70 (77%), Positives = 62/70 (88%)
Frame = +2
Query: 56 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 235
MREI+HIQ GQCGNQIG+KFWE++ DEHGIDPTG Y G+SDLQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60
Query: 236 PRAILVAWSP 265
PRAIL+ P
Sbjct: 61 PRAILMDLEP 70
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 143 bits (347), Expect = 9e-35
Identities = 62/67 (92%), Positives = 66/67 (98%)
Frame = +1
Query: 256 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 435
LEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+C
Sbjct: 68 LEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127
Query: 436 DCLQGFQ 456
DCLQGFQ
Sbjct: 128 DCLQGFQ 134
Score = 129 bits (312), Expect = 2e-30
Identities = 59/71 (83%), Positives = 65/71 (91%)
Frame = +3
Query: 510 SKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICF 689
SKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICF
Sbjct: 153 SKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICF 212
Query: 690 RTLKLSTPTYG 722
RTLKL+TP++G
Sbjct: 213 RTLKLTTPSFG 223
Score = 124 bits (300), Expect = 5e-29
Identities = 54/70 (77%), Positives = 61/70 (87%)
Frame = +2
Query: 56 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 235
MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 236 PRAILVAWSP 265
PRA+L+ P
Sbjct: 61 PRAVLMDLEP 70
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 143 bits (347), Expect = 9e-35
Identities = 62/67 (92%), Positives = 66/67 (98%)
Frame = +1
Query: 256 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 435
LEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+C
Sbjct: 68 LEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127
Query: 436 DCLQGFQ 456
DCLQGFQ
Sbjct: 128 DCLQGFQ 134
Score = 129 bits (312), Expect = 2e-30
Identities = 59/71 (83%), Positives = 65/71 (91%)
Frame = +3
Query: 510 SKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICF 689
SKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICF
Sbjct: 153 SKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICF 212
Query: 690 RTLKLSTPTYG 722
RTLKL+TP++G
Sbjct: 213 RTLKLTTPSFG 223
Score = 124 bits (300), Expect = 5e-29
Identities = 54/70 (77%), Positives = 61/70 (87%)
Frame = +2
Query: 56 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 235
MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 236 PRAILVAWSP 265
PRA+L+ P
Sbjct: 61 PRAVLMDLEP 70
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 142 bits (345), Expect = 2e-34
Identities = 63/67 (94%), Positives = 66/67 (98%)
Frame = +1
Query: 256 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 435
LEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+
Sbjct: 68 LEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENS 127
Query: 436 DCLQGFQ 456
DCLQGFQ
Sbjct: 128 DCLQGFQ 134
Score = 129 bits (312), Expect = 2e-30
Identities = 59/71 (83%), Positives = 64/71 (90%)
Frame = +3
Query: 510 SKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICF 689
SKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICF
Sbjct: 153 SKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICF 212
Query: 690 RTLKLSTPTYG 722
RTLKL+ PT+G
Sbjct: 213 RTLKLANPTFG 223
Score = 124 bits (299), Expect = 6e-29
Identities = 55/70 (78%), Positives = 61/70 (87%)
Frame = +2
Query: 56 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 235
MREI+HIQ GQCGNQIGAKFWE+I DEHGID TG Y GDS LQLERI+VY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60
Query: 236 PRAILVAWSP 265
PRA+L+ P
Sbjct: 61 PRAVLMDLEP 70
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 77.8 bits (183), Expect = 7e-15
Identities = 34/66 (51%), Positives = 46/66 (69%)
Frame = +1
Query: 256 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 435
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD VRK A++C
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNC 129
Query: 436 DCLQGF 453
LQGF
Sbjct: 130 TGLQGF 135
Score = 75.8 bits (178), Expect = 3e-14
Identities = 32/69 (46%), Positives = 47/69 (68%)
Frame = +3
Query: 513 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 692
++ +Y + +++ PSP+VS VVEPYN+ LS H L+E+TD +DNEA+YDIC R
Sbjct: 156 RLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRR 215
Query: 693 TLKLSTPTY 719
+L + PTY
Sbjct: 216 SLDIERPTY 224
Score = 62.9 bits (146), Expect = 2e-10
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +2
Query: 56 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 229
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 230 YVPRAILVAWSP 265
+VPRA+ V P
Sbjct: 61 HVPRAVFVDLEP 72
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 77.8 bits (183), Expect = 7e-15
Identities = 34/66 (51%), Positives = 46/66 (69%)
Frame = +1
Query: 256 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 435
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD VRK A++C
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNC 129
Query: 436 DCLQGF 453
LQGF
Sbjct: 130 TGLQGF 135
Score = 75.8 bits (178), Expect = 3e-14
Identities = 32/69 (46%), Positives = 47/69 (68%)
Frame = +3
Query: 513 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 692
++ +Y + +++ PSP+VS VVEPYN+ LS H L+E+TD +DNEA+YDIC R
Sbjct: 156 RLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRR 215
Query: 693 TLKLSTPTY 719
+L + PTY
Sbjct: 216 SLDIERPTY 224
Score = 62.9 bits (146), Expect = 2e-10
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +2
Query: 56 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 229
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 230 YVPRAILVAWSP 265
+VPRA+ V P
Sbjct: 61 HVPRAVFVDLEP 72
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 77.4 bits (182), Expect = 9e-15
Identities = 33/69 (47%), Positives = 49/69 (71%)
Frame = +3
Query: 513 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 692
++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E+TD + +DNEA+YDIC R
Sbjct: 156 RLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRR 215
Query: 693 TLKLSTPTY 719
+L + PTY
Sbjct: 216 SLNIERPTY 224
Score = 77.0 bits (181), Expect = 1e-14
Identities = 33/66 (50%), Positives = 46/66 (69%)
Frame = +1
Query: 256 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 435
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK A++C
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNC 129
Query: 436 DCLQGF 453
LQGF
Sbjct: 130 TGLQGF 135
Score = 60.5 bits (140), Expect = 1e-09
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +2
Query: 56 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 229
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 230 YVPRAILVAWSP 265
+VPRA+ V P
Sbjct: 61 HVPRAVFVDLEP 72
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 77.4 bits (182), Expect = 9e-15
Identities = 33/69 (47%), Positives = 49/69 (71%)
Frame = +3
Query: 513 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 692
++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E+TD + +DNEA+YDIC R
Sbjct: 156 RLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRR 215
Query: 693 TLKLSTPTY 719
+L + PTY
Sbjct: 216 SLNIERPTY 224
Score = 77.0 bits (181), Expect = 1e-14
Identities = 33/66 (50%), Positives = 46/66 (69%)
Frame = +1
Query: 256 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 435
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK A++C
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNC 129
Query: 436 DCLQGF 453
LQGF
Sbjct: 130 TGLQGF 135
Score = 60.5 bits (140), Expect = 1e-09
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +2
Query: 56 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 229
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 230 YVPRAILVAWSP 265
+VPRA+ V P
Sbjct: 61 HVPRAVFVDLEP 72
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 77.4 bits (182), Expect = 9e-15
Identities = 33/69 (47%), Positives = 49/69 (71%)
Frame = +3
Query: 513 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 692
++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E+TD + +DNEA+YDIC R
Sbjct: 156 RLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRR 215
Query: 693 TLKLSTPTY 719
+L + PTY
Sbjct: 216 SLSIERPTY 224
Score = 77.0 bits (181), Expect = 1e-14
Identities = 33/66 (50%), Positives = 46/66 (69%)
Frame = +1
Query: 256 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 435
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK A++C
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNC 129
Query: 436 DCLQGF 453
LQGF
Sbjct: 130 TGLQGF 135
Score = 58.0 bits (134), Expect = 6e-09
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +2
Query: 56 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 229
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 230 YVPRAILVAWSP 265
+VPRA+ V P
Sbjct: 61 HVPRAVFVDLEP 72
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 77.4 bits (182), Expect = 9e-15
Identities = 33/69 (47%), Positives = 49/69 (71%)
Frame = +3
Query: 513 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 692
++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E+TD + +DNEA+YDIC R
Sbjct: 156 RLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRR 215
Query: 693 TLKLSTPTY 719
+L + PTY
Sbjct: 216 SLSIERPTY 224
Score = 77.0 bits (181), Expect = 1e-14
Identities = 33/66 (50%), Positives = 46/66 (69%)
Frame = +1
Query: 256 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 435
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK A++C
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNC 129
Query: 436 DCLQGF 453
LQGF
Sbjct: 130 TGLQGF 135
Score = 58.0 bits (134), Expect = 6e-09
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +2
Query: 56 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 229
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 230 YVPRAILVAWSP 265
+VPRA+ V P
Sbjct: 61 HVPRAVFVDLEP 72
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 76.2 bits (179), Expect = 2e-14
Identities = 32/66 (48%), Positives = 47/66 (71%)
Frame = +1
Query: 256 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 435
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD+ L+ +RK A++C
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLERLRKLADNC 129
Query: 436 DCLQGF 453
LQGF
Sbjct: 130 TGLQGF 135
Score = 75.4 bits (177), Expect = 4e-14
Identities = 31/56 (55%), Positives = 42/56 (75%)
Frame = +3
Query: 552 YSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTY 719
+++ PSP+VS VVEPYN+ LS H L+E+TD +DNEA+YDIC R+L + PTY
Sbjct: 169 FTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTY 224
Score = 62.5 bits (145), Expect = 3e-10
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +2
Query: 56 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 229
MREI+ I GQ G Q+G WE+ EHGI P G DS + + N +++E S G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 230 YVPRAILVAWSP 265
+VPRA+ + P
Sbjct: 61 HVPRAVFLDLEP 72
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 63.3 bits (147), Expect = 2e-10
Identities = 28/69 (40%), Positives = 42/69 (60%)
Frame = +2
Query: 59 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 238
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 239 RAILVAWSP 265
RA+L+ P
Sbjct: 63 RALLIDLEP 71
Score = 54.4 bits (125), Expect = 7e-08
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = +3
Query: 516 IREEYPDRIMNTYSVVPSP-KVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 692
+ + Y +++ TYSV P+ + SD VV+PYN+ L++ +L N D +DN AL I
Sbjct: 157 LNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVE 216
Query: 693 TLKLSTPTY 719
L L+ PT+
Sbjct: 217 RLHLTNPTF 225
Score = 52.8 bits (121), Expect = 2e-07
Identities = 22/68 (32%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Frame = +1
Query: 256 LEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 429
LEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D++ +EA+
Sbjct: 69 LEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEIMDMIDREAD 127
Query: 430 SCDCLQGF 453
D L+GF
Sbjct: 128 GSDSLEGF 135
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 63.3 bits (147), Expect = 2e-10
Identities = 28/69 (40%), Positives = 42/69 (60%)
Frame = +2
Query: 59 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 238
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 239 RAILVAWSP 265
RA+L+ P
Sbjct: 63 RALLIDLEP 71
Score = 54.0 bits (124), Expect = 1e-07
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = +3
Query: 516 IREEYPDRIMNTYSVVPSP-KVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 692
+ + Y +++ TYSV P+ + SD VV+PYN+ L++ +L N D +DN AL I
Sbjct: 157 LNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALGRIAVE 216
Query: 693 TLKLSTPTY 719
L L+ PT+
Sbjct: 217 RLHLTNPTF 225
Score = 52.4 bits (120), Expect = 3e-07
Identities = 22/68 (32%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Frame = +1
Query: 256 LEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 429
LEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D++ +EA+
Sbjct: 69 LEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEIMDMIDREAD 127
Query: 430 SCDCLQGF 453
D L+GF
Sbjct: 128 GSDSLEGF 135
>At5g20860.1 68418.m02477 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 512
Score = 32.3 bits (70), Expect = 0.33
Identities = 13/44 (29%), Positives = 27/44 (61%)
Frame = +3
Query: 579 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLST 710
S+ ++ P ++++ +LV D TY + + ++ D C R +K+ST
Sbjct: 77 SNLLIPPLSSSMGSSKLVSLEDSTYTLPSPSVSDSCERLMKMST 120
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 31.5 bits (68), Expect = 0.58
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Frame = +2
Query: 56 MREIVHIQAGQCGNQIGAKFWEIISDEHGI--DP-TGAYHGDSDLQLERINVYYNEASG- 223
MREIV IQ G+ N +G+ FW + G+ DP + + +L ++ + G
Sbjct: 1 MREIVTIQVGEFANFVGSHFWNFQDELLGLASDPESDPIFRNHNLDMDVLYRSGETQQGV 60
Query: 224 GKYVPRAILVAWSPAPWTLSA 286
Y PR + V A T+S+
Sbjct: 61 ATYTPRLVSVNLKGALGTMSS 81
>At1g33360.1 68414.m04129 ATP-dependent Clp protease ATP-binding
subunit ClpX, putative similar to CLP protease
regulatory subunit CLPX GI:2674203 from [Arabidopsis
thaliana]
Length = 656
Score = 31.5 bits (68), Expect = 0.58
Identities = 20/49 (40%), Positives = 21/49 (42%)
Frame = -1
Query: 514 LE*GGCPYRNRCRRRASVSVGIPGGNHTIPLPFERRLKLNRRAQHPPCS 368
LE G CP R R S G GG P+P RR KL P CS
Sbjct: 29 LELGSCPRRRIQERFKSEQGGGGGGGDDFPVPVTRR-KLRAEPNCPRCS 76
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = +1
Query: 388 LVDSVLDVVRKEAESCDCLQGF 453
+++SV VVRKEAE+C+CLQ F
Sbjct: 1 MINSV-GVVRKEAENCNCLQVF 21
>At4g37380.1 68417.m05293 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 632
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = +3
Query: 417 KGSGIV*LPPGIPTDTLARRRHRFRYGHPPHSKIREEY 530
K GIV PGI T + + H FR G HSK +E Y
Sbjct: 490 KEKGIV-KEPGISTIEIENKVHEFRAGDREHSKSKEIY 526
>At4g22070.1 68417.m03192 WRKY family transcription factor identical
to WRKY transcription factor 31 (WRKY31) GI:15990589
from [Arabidopsis thaliana]
Length = 538
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 3/32 (9%)
Frame = -1
Query: 505 GGCPYRN---RCRRRASVSVGIPGGNHTIPLP 419
GGCP R RC S+ + GNH PLP
Sbjct: 326 GGCPVRKQVQRCAEDRSILITTYEGNHNHPLP 357
>At2g37740.1 68415.m04629 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 304
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -1
Query: 463 VSVGIPGGNHTIPLPFERRLKLNRRAQHPPCSVPWPSC 350
VS G+PG HT P ++ ++ +++ P S PW SC
Sbjct: 136 VSSGLPGKQHTSSSPPSFVVEPSKNSKYIPSSSPW-SC 172
>At3g57880.1 68416.m06452 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 773
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 5/52 (9%)
Frame = +3
Query: 480 HRFRYGHPPHSKIR-----EEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSV 620
+R+R HPPH R +PD + + P+ + SD V Y+ S+
Sbjct: 633 YRWRPRHPPHMDTRLSHADSAHPDELDEEFDTFPTSRPSDIVRMRYDRLRSI 684
>At1g51570.1 68414.m05804 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 776
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 5/52 (9%)
Frame = +3
Query: 480 HRFRYGHPPHSKIR-----EEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSV 620
+R+R HPPH R +PD + + P+ + SD V Y+ S+
Sbjct: 636 YRWRPRHPPHMDTRLSHADSAHPDELDEEFDTFPTSRPSDIVRMRYDRLRSI 687
>At1g22610.1 68414.m02823 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 1029
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
Frame = +3
Query: 480 HRFRYGHPPH-----SKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSV 620
+R+R HPPH S+ +PD + + P+ + +D V Y+ SV
Sbjct: 889 YRYRPRHPPHMDARVSQADNAHPDELDEEFDTFPTSRPADIVRMRYDRLRSV 940
>At1g21850.1 68414.m02735 multi-copper oxidase type I family protein
similar to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Pfam profile:
PF00394 Multicopper oxidase
Length = 551
Score = 27.9 bits (59), Expect = 7.2
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = -1
Query: 226 AAGGFIVVYIDALQLQVRVPMVGTGGVDAVLVGDDLPELSSDLVAALTSLDMYDFPHFVL 47
AAGGF + I + + ++ VP G VL+GD DL A L + FP +L
Sbjct: 136 AAGGFGAIRISS-RPRIPVPFPAPAGDYTVLIGDWYKTNHKDLRAQLDNGGKLPFPDGIL 194
>At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putative
similar to (1-4)-beta-mannan endohydrolase [Coffea
arabica] GI:10178872, (1-4)-beta-mannan endohydrolase
GB:AAB87859 [Lycopersicon esculentum]; contains Pfam
profile PF00150: Cellulase (glycosyl hydrolase family 5)
Length = 408
Score = 27.5 bits (58), Expect = 9.5
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +2
Query: 62 EIVHIQAGQCGNQIGAKFWEIISD 133
+I++ A + G+ GA FWE+IS+
Sbjct: 346 DIIYASAQKGGSAAGALFWEVISE 369
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,900,999
Number of Sequences: 28952
Number of extensions: 301551
Number of successful extensions: 909
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 898
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1575119672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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