Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0618
(812 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O18405 Cluster: Surfeit locus protein 4 homolog; n=21; ... 122 8e-27
UniRef50_Q18864 Cluster: Surfeit locus protein 4 homolog; n=2; C... 89 2e-16
UniRef50_UPI0000F2C9FF Cluster: PREDICTED: similar to Surf4 prot... 68 2e-10
UniRef50_Q5C3L6 Cluster: SJCHGC06639 protein; n=1; Schistosoma j... 63 9e-09
UniRef50_O74559 Cluster: Surfeit locus protein 4 homolog; n=1; S... 58 3e-07
UniRef50_Q5KAQ3 Cluster: ER to Golgi transport-related protein, ... 56 1e-06
UniRef50_O45731 Cluster: Uncharacterized protein T02E1.7; n=2; C... 52 2e-05
UniRef50_Q6C368 Cluster: Yarrowia lipolytica chromosome F of str... 48 3e-04
UniRef50_A3GGM7 Cluster: Predicted protein; n=6; Saccharomycetal... 41 0.032
UniRef50_P53337 Cluster: ER-derived vesicles protein ERV29; n=7;... 40 0.075
UniRef50_Q1Q2T8 Cluster: Similar to cobalamin biosynthesis prote... 37 0.70
UniRef50_Q1EV05 Cluster: Amino acid permease-associated region; ... 35 2.8
UniRef50_Q9X8X3 Cluster: Putative regulatory protein; n=5; Actin... 33 6.5
UniRef50_O22017 Cluster: HepC protein; n=1; Cylindrotheca fusifo... 33 6.5
UniRef50_UPI00015B5CE1 Cluster: PREDICTED: similar to ENSANGP000... 33 8.6
UniRef50_Q55FD4 Cluster: Putative uncharacterized protein; n=1; ... 33 8.6
>UniRef50_O18405 Cluster: Surfeit locus protein 4 homolog; n=21;
Eumetazoa|Rep: Surfeit locus protein 4 homolog -
Drosophila melanogaster (Fruit fly)
Length = 270
Score = 122 bits (295), Expect = 8e-27
Identities = 53/86 (61%), Positives = 66/86 (76%)
Frame = +1
Query: 505 GLPSLGENKPKTYLQLAGRILLAFMFITLLRFEISFLQIIQDLLGSILMILVTVGYRTKX 684
G+PS+GENKPK ++QLAGRILLAFMFITL+RFE+S Q+IQD++GSILM+LV +GY+TK
Sbjct: 145 GVPSMGENKPKNFMQLAGRILLAFMFITLIRFELSVWQVIQDIIGSILMVLVVLGYKTKL 204
Query: 685 XXXXXXXXXXXXXXYHNAWWAVPSYK 762
YHNAWW +PSYK
Sbjct: 205 SALILVALLTILNLYHNAWWTIPSYK 230
Score = 109 bits (263), Expect = 6e-23
Identities = 46/60 (76%), Positives = 55/60 (91%)
Frame = +3
Query: 75 MQIPNEYVSTAEDVADQVIRKGKNVLPTVARLCLISTFLEDGLRMWFQWSEQRDYMDMSW 254
M IPNEY++ EDVA+QVI++GKNVLPTVARLCLI+TF EDGLRM+ QW+EQR+YMDMSW
Sbjct: 1 MSIPNEYIAKTEDVAEQVIKRGKNVLPTVARLCLIATFFEDGLRMYIQWNEQREYMDMSW 60
Score = 101 bits (242), Expect = 2e-20
Identities = 51/85 (60%), Positives = 55/85 (64%)
Frame = +2
Query: 254 GCGKFLATMFVIVNLFGQLGGCVMVLGRLKVDIACGVLFFIVVLQTFAYSILWDVQFXXX 433
GCGKFLAT+FV+VNL GQLGGC MV+ R KVDIA G+LFFIVVLQT AYSILWD QF
Sbjct: 61 GCGKFLATVFVLVNLLGQLGGCGMVMARFKVDIAVGLLFFIVVLQTVAYSILWDFQFLLR 120
Query: 434 XXXXXXXXXXXXXXXXXXXXSLFAG 508
SLFAG
Sbjct: 121 NFALIGALLLVLAEARIEGRSLFAG 145
Score = 36.7 bits (81), Expect = 0.70
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 765 LRDFLKYDFFQTLSVI 812
LRDFLKYDFFQTLSVI
Sbjct: 232 LRDFLKYDFFQTLSVI 247
>UniRef50_Q18864 Cluster: Surfeit locus protein 4 homolog; n=2;
Caenorhabditis|Rep: Surfeit locus protein 4 homolog -
Caenorhabditis elegans
Length = 277
Score = 88.6 bits (210), Expect = 2e-16
Identities = 38/91 (41%), Positives = 62/91 (68%), Gaps = 1/91 (1%)
Frame = +1
Query: 487 RAQSVRGLPSLGE-NKPKTYLQLAGRILLAFMFITLLRFEISFLQIIQDLLGSILMILVT 663
+A G+P++G+ NKPK+Y+ LAGR+LL FMF++L+ FE+SF+Q+++ ++G L+ LV+
Sbjct: 145 KASLFAGVPTMGDSNKPKSYMLLAGRVLLIFMFMSLMHFEMSFMQVLEIVVGFALITLVS 204
Query: 664 VGYRTKXXXXXXXXXXXXXXXYHNAWWAVPS 756
+GY+TK + NAWW +PS
Sbjct: 205 IGYKTKLSAIVLVIWLFGLNLWLNAWWTIPS 235
Score = 78.2 bits (184), Expect = 2e-13
Identities = 31/57 (54%), Positives = 43/57 (75%)
Frame = +3
Query: 87 NEYVSTAEDVADQVIRKGKNVLPTVARLCLISTFLEDGLRMWFQWSEQRDYMDMSWA 257
NE ++ AED A+ RK + LP +ARLCL+STFLEDG+RM+FQW +Q+ +M SW+
Sbjct: 11 NEMLAKAEDAAEDFFRKTRTYLPHIARLCLVSTFLEDGIRMYFQWDDQKQFMQESWS 67
Score = 72.1 bits (169), Expect = 2e-11
Identities = 37/84 (44%), Positives = 47/84 (55%)
Frame = +2
Query: 257 CGKFLATMFVIVNLFGQLGGCVMVLGRLKVDIACGVLFFIVVLQTFAYSILWDVQFXXXX 436
CG F+AT+FVI N FGQ +M++ R KV +ACG+L IV+LQT AY ILWD++F
Sbjct: 68 CGWFIATLFVIYNFFGQFIPVLMIMLRKKVLVACGILASIVILQTIAYHILWDLKFLARN 127
Query: 437 XXXXXXXXXXXXXXXXXXXSLFAG 508
SLFAG
Sbjct: 128 IAVGGGLLLLLAETQEEKASLFAG 151
Score = 33.5 bits (73), Expect = 6.5
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = +3
Query: 768 RDFLKYDFFQTLSVI 812
RDF+KYDFFQT+SVI
Sbjct: 240 RDFMKYDFFQTMSVI 254
>UniRef50_UPI0000F2C9FF Cluster: PREDICTED: similar to Surf4
protein; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to Surf4 protein - Monodelphis domestica
Length = 298
Score = 68.1 bits (159), Expect = 2e-10
Identities = 30/84 (35%), Positives = 48/84 (57%)
Frame = +1
Query: 505 GLPSLGENKPKTYLQLAGRILLAFMFITLLRFEISFLQIIQDLLGSILMILVTVGYRTKX 684
G+P+L P+ Y++L GR+LL MFI+LL FE++ I QD+ +L+ILV +G++TK
Sbjct: 173 GVPTLDCTSPQQYIRLGGRVLLLLMFISLLHFEVNVFTIFQDVSKMVLVILVAIGFKTKL 232
Query: 685 XXXXXXXXXXXXXXYHNAWWAVPS 756
N +W +P+
Sbjct: 233 AALTLVIWLFLINLVENPFWIIPA 256
Score = 67.3 bits (157), Expect = 4e-10
Identities = 28/60 (46%), Positives = 43/60 (71%)
Frame = +3
Query: 96 VSTAEDVADQVIRKGKNVLPTVARLCLISTFLEDGLRMWFQWSEQRDYMDMSWAAANSSP 275
+ T E+++DQ + K LP +ARLCLISTFLEDG+ W+QW+EQ++ + MS +++ P
Sbjct: 36 IETVENLSDQFLHLTKRFLPHLARLCLISTFLEDGIHTWWQWNEQKESIKMSGSSSPLLP 95
Score = 48.8 bits (111), Expect = 2e-04
Identities = 20/46 (43%), Positives = 33/46 (71%)
Frame = +2
Query: 287 IVNLFGQLGGCVMVLGRLKVDIACGVLFFIVVLQTFAYSILWDVQF 424
+++ FGQL GCV++L + V AC VLF I+ +Q A+ +LW+++F
Sbjct: 100 MISSFGQLVGCVLILVQKFVPCACFVLFGIIFMQVLAFGLLWNLRF 145
>UniRef50_Q5C3L6 Cluster: SJCHGC06639 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC06639 protein - Schistosoma
japonicum (Blood fluke)
Length = 231
Score = 62.9 bits (146), Expect = 9e-09
Identities = 26/55 (47%), Positives = 36/55 (65%)
Frame = +3
Query: 90 EYVSTAEDVADQVIRKGKNVLPTVARLCLISTFLEDGLRMWFQWSEQRDYMDMSW 254
E + +D AD ++RK + LP AR CL+STF+EDG R+ QWS+Q DY+ W
Sbjct: 13 ELLDRLDDHADWLVRKTRRYLPHAARFCLVSTFIEDGFRLLTQWSDQVDYIQSVW 67
Score = 62.5 bits (145), Expect = 1e-08
Identities = 31/81 (38%), Positives = 43/81 (53%)
Frame = +1
Query: 505 GLPSLGENKPKTYLQLAGRILLAFMFITLLRFEISFLQIIQDLLGSILMILVTVGYRTKX 684
GLPS GEN + Y+ L GRIL+ M +TL+ S IIQ + IL++LV +GY+ K
Sbjct: 151 GLPSAGENTLRQYILLGGRILIILMSLTLIHLGSSIFYIIQSIGNLILVLLVAIGYKPKL 210
Query: 685 XXXXXXXXXXXXXXYHNAWWA 747
Y+N +WA
Sbjct: 211 CATVLVIWLTGMNFYYNRFWA 231
Score = 40.7 bits (91), Expect = 0.043
Identities = 22/59 (37%), Positives = 29/59 (49%)
Frame = +2
Query: 248 VLGCGKFLATMFVIVNLFGQLGGCVMVLGRLKVDIACGVLFFIVVLQTFAYSILWDVQF 424
V G A F+ VN+ Q G VLGR +V I +L V++QT Y+I V F
Sbjct: 66 VWGIPVIFAAFFIFVNIVTQFVGSAFVLGRYRVKIGVAILMSTVLIQTVGYNIWTRVFF 124
>UniRef50_O74559 Cluster: Surfeit locus protein 4 homolog; n=1;
Schizosaccharomyces pombe|Rep: Surfeit locus protein 4
homolog - Schizosaccharomyces pombe (Fission yeast)
Length = 302
Score = 57.6 bits (133), Expect = 3e-07
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Frame = +1
Query: 487 RAQSVRGLPSLGENKPKTYLQLAGRILLAFMFITLLRFE---ISFLQIIQDLLGSILMIL 657
R GLP++ E+ +TY QLAGR+LL FMF+ LL E IS+ +I+ +L +
Sbjct: 168 RINRFAGLPAVSEHNKRTYFQLAGRVLLIFMFLGLLAKEGSGISWTRILVHILSVTACAM 227
Query: 658 VTVGYRTKXXXXXXXXXXXXXXXYHNAWWAVP 753
V +G++ K N++W+VP
Sbjct: 228 VVIGFKAKFFAAVLVLILSVANFIINSFWSVP 259
Score = 34.3 bits (75), Expect = 3.7
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +3
Query: 150 LPTVARLCLISTFLEDGLRMWFQWSEQRDYM 242
+P + R +++T+ ED +R+ QW EQ YM
Sbjct: 54 MPLLGRFLIVATYFEDAIRIVTQWPEQVSYM 84
>UniRef50_Q5KAQ3 Cluster: ER to Golgi transport-related protein,
putative; n=18; Dikarya|Rep: ER to Golgi
transport-related protein, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 315
Score = 56.0 bits (129), Expect = 1e-06
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +1
Query: 505 GLPSLGENKPKTYLQLAGRILLAFMFI-TLLRFEISFLQIIQDLLGSILMILVTVGYRTK 681
GLP+L E + Y QLAGRILL F+FI + + SF ++I ++G ++V VG++ K
Sbjct: 189 GLPTLSETDRRKYFQLAGRILLIFLFIGFVFQGNWSFARVIVSIVGLGACVMVAVGFKAK 248
Query: 682 XXXXXXXXXXXXXXXYHNAWWAV 750
+ N WW+V
Sbjct: 249 WSASFLVALLSIFNVFINNWWSV 271
Score = 40.3 bits (90), Expect = 0.056
Identities = 18/51 (35%), Positives = 30/51 (58%)
Frame = +3
Query: 90 EYVSTAEDVADQVIRKGKNVLPTVARLCLISTFLEDGLRMWFQWSEQRDYM 242
++ S EDV + + + +P +AR ++ TFLED LR+ QW +Q Y+
Sbjct: 50 KWSSKVEDVIETYTQPIRPYVPALARFLIVVTFLEDALRILTQWGDQLWYL 100
Score = 34.3 bits (75), Expect = 3.7
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = +3
Query: 768 RDFLKYDFFQTLSVI 812
RDFLKYDFFQTLS++
Sbjct: 278 RDFLKYDFFQTLSIV 292
>UniRef50_O45731 Cluster: Uncharacterized protein T02E1.7; n=2;
Caenorhabditis|Rep: Uncharacterized protein T02E1.7 -
Caenorhabditis elegans
Length = 269
Score = 52.0 bits (119), Expect = 2e-05
Identities = 22/56 (39%), Positives = 34/56 (60%)
Frame = +3
Query: 87 NEYVSTAEDVADQVIRKGKNVLPTVARLCLISTFLEDGLRMWFQWSEQRDYMDMSW 254
N ++ ED + + R + VLPT+ RL LISTF+EDGLR+ F + ++ +W
Sbjct: 4 NVVITRCEDYTETLARNTRKVLPTIGRLLLISTFVEDGLRLLFNTHDHVNHFSYNW 59
>UniRef50_Q6C368 Cluster: Yarrowia lipolytica chromosome F of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome F of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 322
Score = 48.0 bits (109), Expect = 3e-04
Identities = 16/54 (29%), Positives = 34/54 (62%)
Frame = +2
Query: 263 KFLATMFVIVNLFGQLGGCVMVLGRLKVDIACGVLFFIVVLQTFAYSILWDVQF 424
KF+ +F+++N+ + G MV + ++++ CG+L ++V Q AY +++D F
Sbjct: 113 KFITVIFLLLNVVAMIAGSFMVTAKKRIEVGCGLLVGVIVTQALAYGLIFDFGF 166
Score = 43.6 bits (98), Expect = 0.006
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = +1
Query: 505 GLPSLGENKPKTYLQLAGRILLAFMFIT-LLRFEISFLQIIQDLLGSILMILVTVGYRTK 681
GLPS+ + Y+ LAGRILL MF + +L + +++ ++G +V VG++ +
Sbjct: 196 GLPSIDDKDRSKYVLLAGRILLVVMFTSFILNMTWTMSRVLVSIVGIAACSMVVVGFKAR 255
Query: 682 XXXXXXXXXXXXXXXYHNAWWAVPS 756
N++WA P+
Sbjct: 256 VSAFLLCIILFIFNITANSYWAFPA 280
Score = 38.3 bits (85), Expect = 0.23
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +3
Query: 150 LPTVARLCLISTFLEDGLRMWFQWSEQRDYM 242
LPT+ R ++ TFLED LR+ QWS+Q Y+
Sbjct: 75 LPTLGRFLIVVTFLEDALRILTQWSDQVYYI 105
>UniRef50_A3GGM7 Cluster: Predicted protein; n=6;
Saccharomycetales|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 306
Score = 41.1 bits (92), Expect = 0.032
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +3
Query: 90 EYVST-AEDVADQVIRKGKNVLPTVARLCLISTFLEDGLRMWFQWSEQRDYM 242
E++S ED+ D + K +P + R +++TF ED LR+ QWSEQ Y+
Sbjct: 38 EHISKQVEDLIDTYCKPLKPYVPGIGRAFIVATFFEDSLRIISQWSEQIYYL 89
Score = 38.3 bits (85), Expect = 0.23
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Frame = +1
Query: 487 RAQSVRGLPSLGENKPKTYLQLAGRILLAFMFITLL---RFEISFLQIIQDLLGSILMIL 657
R ++ GLP + K Y LAGR+LL F+F+ + + + L +I L+G I
Sbjct: 174 RLLNMPGLPMINNQDNKKYFLLAGRLLLLFLFLGFVFSSTWSLGRLAVI--LIGFISCGS 231
Query: 658 VTVGYRTKXXXXXXXXXXXXXXXYHNAWW 744
+ VG++TK + N +W
Sbjct: 232 IIVGFKTKFAAFVLFVFLFTYNIFANQFW 260
>UniRef50_P53337 Cluster: ER-derived vesicles protein ERV29; n=7;
Saccharomycetales|Rep: ER-derived vesicles protein ERV29
- Saccharomyces cerevisiae (Baker's yeast)
Length = 310
Score = 39.9 bits (89), Expect = 0.075
Identities = 18/53 (33%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Frame = +3
Query: 90 EYVSTAEDVADQ-VIRKGKNVLPTVARLCLISTFLEDGLRMWFQWSEQRDYMD 245
++ S E + D V+ K K +P+++R +++TF ED R+ QWS+Q Y++
Sbjct: 49 KFASRIEGLTDNAVVYKLKPYIPSLSRFFIVATFYEDSFRILSQWSDQIFYLN 101
Score = 38.3 bits (85), Expect = 0.23
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Frame = +1
Query: 508 LPSLGE--NKPKTYLQLAGRILLAFMFITLLRFEISFLQIIQDLLGSILMILVTVGYRTK 681
LP L +K K YL AGRIL+ MFI F S+ ++ ++G+I +GY+TK
Sbjct: 190 LPELNSKNDKAKGYLLFAGRILIVLMFIA-FTFSKSWFTVVLTIIGTICF---AIGYKTK 245
Query: 682 XXXXXXXXXXXXXXXYHNAWWAVPSYKR 765
N +W + KR
Sbjct: 246 FASIMLGLILTFYNITLNNYWFYNNTKR 273
>UniRef50_Q1Q2T8 Cluster: Similar to cobalamin biosynthesis protein
cbiB; n=1; Candidatus Kuenenia stuttgartiensis|Rep:
Similar to cobalamin biosynthesis protein cbiB -
Candidatus Kuenenia stuttgartiensis
Length = 328
Score = 36.7 bits (81), Expect = 0.70
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Frame = +1
Query: 373 HSCITDIRVQYTMGRTVPSPQFGIDRSATAG-VG---GGPS*RAQSVRGLPSLGENKPKT 540
H + +R + GR S GI +A AG +G GGPS V P +G+NK +
Sbjct: 229 HGFQSSLRTAFQEGRKHESLNSGIPEAAFAGALGVQLGGPSTYGGEVVDKPYIGDNKKQL 288
Query: 541 YLQLAGRILLAFMFITLLRFEISFLQII 624
L+ + + L MF+T + F IS L I
Sbjct: 289 TLE-SLEMALRLMFVTSVLFLISGLSFI 315
>UniRef50_Q1EV05 Cluster: Amino acid permease-associated region;
n=1; Clostridium oremlandii OhILAs|Rep: Amino acid
permease-associated region - Clostridium oremlandii
OhILAs
Length = 459
Score = 34.7 bits (76), Expect = 2.8
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +2
Query: 227 AERLHGHVLGCGKFLATMFVIVNLFGQLGGCVMVLGRL 340
AERL G G L TM +I+++FG L GC++ R+
Sbjct: 288 AERLMGRA---GSLLVTMGMIISMFGSLNGCILAFPRM 322
>UniRef50_Q9X8X3 Cluster: Putative regulatory protein; n=5;
Actinomycetales|Rep: Putative regulatory protein -
Streptomyces coelicolor
Length = 422
Score = 33.5 bits (73), Expect = 6.5
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = -1
Query: 605 ISNLKSVMNMKASRMRPASCKYVFGLFSPSDGSPRTDCALQLGPPPTPAVALRS 444
++NL +V+N + + P C VFGL +P + L G P PA+ +RS
Sbjct: 259 LANLNTVLNHEYNGTDPRFCTVVFGLLTPDEDRGGFHITLASGGHP-PAILMRS 311
>UniRef50_O22017 Cluster: HepC protein; n=1; Cylindrotheca
fusiformis|Rep: HepC protein - Cylindrotheca fusiformis
(Marine diatom)
Length = 780
Score = 33.5 bits (73), Expect = 6.5
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -1
Query: 557 PASCKYVFGLFSPS-DGSPRTDCALQLGPPPTPAVALRSMPNCG 429
PA C+ +F+PS DGSP C+ + P P P+ P CG
Sbjct: 383 PAECRPDNPMFTPSPDGSPPV-CSPTMMPSPQPSAGSNEPPECG 425
>UniRef50_UPI00015B5CE1 Cluster: PREDICTED: similar to
ENSANGP00000006187; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000006187 - Nasonia
vitripennis
Length = 1634
Score = 33.1 bits (72), Expect = 8.6
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = -3
Query: 447 INAKLRRRNCTSHSI-LYANVCNTTMKNSTP-QAISTLSLPSTITHPPN*PNKFTITNIV 274
+++ L+R N +SI NV NT TP +S +T T PNK T+T+ V
Sbjct: 307 VDSGLKRNNEPRNSIEATKNVINTNFNKGTPANGLSVPDSKTTTTCNNKSPNKSTVTSTV 366
Query: 273 ARNLPQPRTCPCSLSAL 223
+ PR ++S +
Sbjct: 367 KSKVNPPRPAYSTISRM 383
>UniRef50_Q55FD4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 476
Score = 33.1 bits (72), Expect = 8.6
Identities = 17/84 (20%), Positives = 36/84 (42%)
Frame = -3
Query: 750 HRPPRVMVQFENCQYEDKHQSRQLRPVAHRHQYHQDAPEKILYDLQE*DFKS*ERDEHEG 571
H P+ Q + Q + + Q +Q + + + QYHQ ++ Y Q+ + ++ + +
Sbjct: 249 HHAPQYQQQQQQQQSQQQQQQQQSQQQSQQQQYHQQRQQQQYYQQQQQQQQQQQQQQQQQ 308
Query: 570 QQDATGELQVRLRFVLSERRQPAN 499
QQ + R + +S N
Sbjct: 309 QQQQQQQQPYRQQQTISSHHHQRN 332
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 813,993,458
Number of Sequences: 1657284
Number of extensions: 17303752
Number of successful extensions: 54286
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 51123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54109
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 70377768045
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -